RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LINC00643Q86TS7 51 aa7.57□□□□□ -1.2
TRAPPC3-207ENST00000497251 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
TRAPPC3-207ENST00000497251 A0A1B0GV90 55 aa7.56□□□□□ -1.2
TRAPPC3-207ENST00000497251 LOC101927531A0A1B0GV80 90 aa7.55□□□□□ -1.2
TRAPPC3-207ENST00000497251 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
TRAPPC3-207ENST00000497251 UQCRQO14949 82 aa7.53□□□□□ -1.2
TRAPPC3-207ENST00000497251 ATOX1O00244 68 aa7.5□□□□□ -1.21
TRAPPC3-207ENST00000497251 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
TRAPPC3-207ENST00000497251 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
TRAPPC3-207ENST00000497251 KRTAP20-1Q3LI63 56 aa7.5□□□□□ -1.21
TRAPPC3-207ENST00000497251 LCA10Q71F78 164 aa7.49□□□□□ -1.21
TRAPPC3-207ENST00000497251 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
TRAPPC3-207ENST00000497251 A0A087WVE0 104 aa7.47□□□□□ -1.21
TRAPPC3-207ENST00000497251 H0Y9P7 68 aa7.46□□□□□ -1.22
TRAPPC3-207ENST00000497251 J3QR89 54 aa7.44□□□□□ -1.22
TRAPPC3-207ENST00000497251 KMT2DO14686 5537 aa7.4□□□□□ -1.23
TRAPPC3-207ENST00000497251 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
TRAPPC3-207ENST00000497251 IMUPQ9GZP8 106 aa7.37□□□□□ -1.23
TRAPPC3-207ENST00000497251 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
TRAPPC3-207ENST00000497251 A8MUN3 132 aa7.34□□□□□ -1.23
TRAPPC3-207ENST00000497251 MP68P56378 58 aa7.34□□□□□ -1.23
TRAPPC3-207ENST00000497251 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
TRAPPC3-207ENST00000497251 H3BPC8 53 aa7.28□□□□□ -1.24
TRAPPC3-207ENST00000497251 NDUFC1O43677 76 aa7.28□□□□□ -1.24
TRAPPC3-207ENST00000497251 H0YAA0 97 aa7.27□□□□□ -1.25
TRAPPC3-207ENST00000497251 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.25
TRAPPC3-207ENST00000497251 KRTAP2-4Q9BYR9 128 aa7.27□□□□□ -1.25
TRAPPC3-207ENST00000497251 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
TRAPPC3-207ENST00000497251 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
TRAPPC3-207ENST00000497251 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
TRAPPC3-207ENST00000497251 K7ERU9 68 aa7.18□□□□□ -1.26
TRAPPC3-207ENST00000497251 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
TRAPPC3-207ENST00000497251 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
TRAPPC3-207ENST00000497251 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
TRAPPC3-207ENST00000497251 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
TRAPPC3-207ENST00000497251 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
TRAPPC3-207ENST00000497251 SPRR2EP22531 72 aa7.1□□□□□ -1.27
TRAPPC3-207ENST00000497251 SPRR2BP35325 72 aa7.1□□□□□ -1.27
TRAPPC3-207ENST00000497251 SPRR2AP35326 72 aa7.1□□□□□ -1.27
TRAPPC3-207ENST00000497251 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
TRAPPC3-207ENST00000497251 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
TRAPPC3-207ENST00000497251 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
TRAPPC3-207ENST00000497251 MT1XP80297 61 aa7.06□□□□□ -1.28
TRAPPC3-207ENST00000497251 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
TRAPPC3-207ENST00000497251 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
TRAPPC3-207ENST00000497251 KRTAP2-2Q9BYT5 123 aa7.02□□□□□ -1.29
TRAPPC3-207ENST00000497251 KRTAP2-1Q9BYU5 128 aa7.02□□□□□ -1.29
TRAPPC3-207ENST00000497251 C20orf197Q8N268 126 aa7□□□□□ -1.29
TRAPPC3-207ENST00000497251 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
TRAPPC3-207ENST00000497251 R4GN34 69 aa6.98□□□□□ -1.29
TRAPPC3-207ENST00000497251 ACYP2P14621 99 aa6.97□□□□□ -1.29
TRAPPC3-207ENST00000497251 P0C880 135 aa6.94□□□□□ -1.3
TRAPPC3-207ENST00000497251 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
TRAPPC3-207ENST00000497251 SPRR2DP22532 72 aa6.88□□□□□ -1.31
TRAPPC3-207ENST00000497251 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
TRAPPC3-207ENST00000497251 M0QZ58 72 aa6.86□□□□□ -1.31
TRAPPC3-207ENST00000497251 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
TRAPPC3-207ENST00000497251 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
TRAPPC3-207ENST00000497251 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
TRAPPC3-207ENST00000497251 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
TRAPPC3-207ENST00000497251 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
TRAPPC3-207ENST00000497251 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
TRAPPC3-207ENST00000497251 LINC01554Q52M75 96 aa6.74□□□□□ -1.33
TRAPPC3-207ENST00000497251 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
TRAPPC3-207ENST00000497251 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC3-207ENST00000497251 COX7CP15954 63 aa6.66□□□□□ -1.34
TRAPPC3-207ENST00000497251 COA5Q86WW8 74 aa6.61□□□□□ -1.35
TRAPPC3-207ENST00000497251 H7BZZ5 65 aa6.54□□□□□ -1.36
TRAPPC3-207ENST00000497251 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
TRAPPC3-207ENST00000497251 SEC61GP60059 68 aa6.49□□□□□ -1.37
TRAPPC3-207ENST00000497251 CYSTM1Q9H1C7 97 aa6.49□□□□□ -1.37
TRAPPC3-207ENST00000497251 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
TRAPPC3-207ENST00000497251 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
TRAPPC3-207ENST00000497251 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
TRAPPC3-207ENST00000497251 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
TRAPPC3-207ENST00000497251 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
TRAPPC3-207ENST00000497251 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
TRAPPC3-207ENST00000497251 A0A1B0GU33 70 aa6.35□□□□□ -1.39
TRAPPC3-207ENST00000497251 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
TRAPPC3-207ENST00000497251 A0A0D9SG42 100 aa6.31□□□□□ -1.4
TRAPPC3-207ENST00000497251 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
TRAPPC3-207ENST00000497251 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
TRAPPC3-207ENST00000497251 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
TRAPPC3-207ENST00000497251 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
TRAPPC3-207ENST00000497251 MT1EP04732 61 aa6.29□□□□□ -1.4
TRAPPC3-207ENST00000497251 A0A1B0GU69 56 aa6.28□□□□□ -1.4
TRAPPC3-207ENST00000497251 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC3-207ENST00000497251 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
TRAPPC3-207ENST00000497251 SPINT4Q6UDR6 99 aa6.22□□□□□ -1.41
TRAPPC3-207ENST00000497251 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
TRAPPC3-207ENST00000497251 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
TRAPPC3-207ENST00000497251 MT1GP13640 62 aa6.2□□□□□ -1.42
TRAPPC3-207ENST00000497251 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
TRAPPC3-207ENST00000497251 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
TRAPPC3-207ENST00000497251 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
TRAPPC3-207ENST00000497251 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
TRAPPC3-207ENST00000497251 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
TRAPPC3-207ENST00000497251 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
TRAPPC3-207ENST00000497251 TMEM258P61165 79 aa6.11□□□□□ -1.43
TRAPPC3-207ENST00000497251 A8MU10 97 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms