RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
DNMT3A-215ENST00000496570 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
DNMT3A-215ENST00000496570 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
DNMT3A-215ENST00000496570 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
DNMT3A-215ENST00000496570 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
DNMT3A-215ENST00000496570 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
DNMT3A-215ENST00000496570 MP68P56378 58 aa7.28□□□□□ -1.24
DNMT3A-215ENST00000496570 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
DNMT3A-215ENST00000496570 A8MUN3 132 aa7.24□□□□□ -1.25
DNMT3A-215ENST00000496570 MT1BP07438 61 aa7.24□□□□□ -1.25
DNMT3A-215ENST00000496570 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
DNMT3A-215ENST00000496570 H3BPC8 53 aa7.22□□□□□ -1.25
DNMT3A-215ENST00000496570 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
DNMT3A-215ENST00000496570 NDUFC1O43677 76 aa7.2□□□□□ -1.26
DNMT3A-215ENST00000496570 H0YAA0 97 aa7.17□□□□□ -1.26
DNMT3A-215ENST00000496570 Q5VV11 94 aa7.14□□□□□ -1.27
DNMT3A-215ENST00000496570 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
DNMT3A-215ENST00000496570 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
DNMT3A-215ENST00000496570 ANAPC13Q9BS18 74 aa7.13□□□□□ -1.27
DNMT3A-215ENST00000496570 MACF1Q9UPN3 7388 aaKnown RBP7.12□□□□□ -1.27
DNMT3A-215ENST00000496570 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
DNMT3A-215ENST00000496570 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
DNMT3A-215ENST00000496570 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
DNMT3A-215ENST00000496570 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
DNMT3A-215ENST00000496570 COX7CP15954 63 aa7.06□□□□□ -1.28
DNMT3A-215ENST00000496570 PCP4P48539 62 aa7.04□□□□□ -1.28
DNMT3A-215ENST00000496570 A6NN06 94 aa7.01□□□□□ -1.29
DNMT3A-215ENST00000496570 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
DNMT3A-215ENST00000496570 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
DNMT3A-215ENST00000496570 P0C880 135 aa6.97□□□□□ -1.29
DNMT3A-215ENST00000496570 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
DNMT3A-215ENST00000496570 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
DNMT3A-215ENST00000496570 ACYP2P14621 99 aa6.92□□□□□ -1.3
DNMT3A-215ENST00000496570 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
DNMT3A-215ENST00000496570 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
DNMT3A-215ENST00000496570 R4GN34 69 aa6.85□□□□□ -1.31
DNMT3A-215ENST00000496570 M0QZ58 72 aa6.82□□□□□ -1.32
DNMT3A-215ENST00000496570 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
DNMT3A-215ENST00000496570 MT1XP80297 61 aa6.8□□□□□ -1.32
DNMT3A-215ENST00000496570 H7BZZ5 65 aa6.79□□□□□ -1.32
DNMT3A-215ENST00000496570 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
DNMT3A-215ENST00000496570 TMEM258P61165 79 aa6.77□□□□□ -1.33
DNMT3A-215ENST00000496570 CHKB-CPT1BH3BT56 60 aa6.75□□□□□ -1.33
DNMT3A-215ENST00000496570 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
DNMT3A-215ENST00000496570 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
DNMT3A-215ENST00000496570 CYSTM1Q9H1C7 97 aa6.74□□□□□ -1.33
DNMT3A-215ENST00000496570 NEBP20929 6669 aa6.7□□□□□ -1.34
DNMT3A-215ENST00000496570 LINC01554Q52M75 96 aa6.7□□□□□ -1.34
DNMT3A-215ENST00000496570 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
DNMT3A-215ENST00000496570 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
DNMT3A-215ENST00000496570 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
DNMT3A-215ENST00000496570 COA5Q86WW8 74 aa6.63□□□□□ -1.35
DNMT3A-215ENST00000496570 KMT2DO14686 5537 aa6.63□□□□□ -1.35
DNMT3A-215ENST00000496570 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
DNMT3A-215ENST00000496570 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
DNMT3A-215ENST00000496570 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
DNMT3A-215ENST00000496570 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
DNMT3A-215ENST00000496570 RPS28P62857 69 aaKnown RBP6.55□□□□□ -1.36
DNMT3A-215ENST00000496570 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
DNMT3A-215ENST00000496570 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
DNMT3A-215ENST00000496570 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
DNMT3A-215ENST00000496570 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
DNMT3A-215ENST00000496570 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
DNMT3A-215ENST00000496570 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
DNMT3A-215ENST00000496570 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
DNMT3A-215ENST00000496570 SEC61GP60059 68 aa6.43□□□□□ -1.38
DNMT3A-215ENST00000496570 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
DNMT3A-215ENST00000496570 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
DNMT3A-215ENST00000496570 V9GYY9 64 aa6.34□□□□□ -1.39
DNMT3A-215ENST00000496570 A0A1B0GU33 70 aa6.33□□□□□ -1.4
DNMT3A-215ENST00000496570 SPRR2EP22531 72 aa6.33□□□□□ -1.4
DNMT3A-215ENST00000496570 SPRR2BP35325 72 aa6.33□□□□□ -1.4
DNMT3A-215ENST00000496570 SPRR2AP35326 72 aa6.33□□□□□ -1.4
DNMT3A-215ENST00000496570 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
DNMT3A-215ENST00000496570 A0A0D9SG42 100 aa6.31□□□□□ -1.4
DNMT3A-215ENST00000496570 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
DNMT3A-215ENST00000496570 Q1T7F1 81 aa6.27□□□□□ -1.41
DNMT3A-215ENST00000496570 A0A1B0GU69 56 aa6.25□□□□□ -1.41
DNMT3A-215ENST00000496570 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
DNMT3A-215ENST00000496570 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
DNMT3A-215ENST00000496570 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
DNMT3A-215ENST00000496570 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
DNMT3A-215ENST00000496570 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
DNMT3A-215ENST00000496570 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
DNMT3A-215ENST00000496570 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
DNMT3A-215ENST00000496570 A8MU10 97 aa6.15□□□□□ -1.42
DNMT3A-215ENST00000496570 SPRR2DP22532 72 aa6.11□□□□□ -1.43
DNMT3A-215ENST00000496570 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
DNMT3A-215ENST00000496570 PSPHP1O15172 72 aa6.08□□□□□ -1.44
DNMT3A-215ENST00000496570 MT1EP04732 61 aa6.01□□□□□ -1.45
DNMT3A-215ENST00000496570 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
DNMT3A-215ENST00000496570 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
DNMT3A-215ENST00000496570 UQCR11O14957 56 aa6□□□□□ -1.45
DNMT3A-215ENST00000496570 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
DNMT3A-215ENST00000496570 A6NED7 52 aa5.95□□□□□ -1.46
DNMT3A-215ENST00000496570 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
DNMT3A-215ENST00000496570 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
DNMT3A-215ENST00000496570 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
DNMT3A-215ENST00000496570 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
DNMT3A-215ENST00000496570 GPR98Q8WXG9 6306 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms