RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 H3BPC8 53 aa10.53□□□□□ -0.72
CHRD-217ENST00000496527 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
CHRD-217ENST00000496527 A8MUN3 132 aa10.49□□□□□ -0.73
CHRD-217ENST00000496527 SSPOA2VEC9 5147 aa10.45□□□□□ -0.74
CHRD-217ENST00000496527 NDUFC1O43677 76 aa10.42□□□□□ -0.74
CHRD-217ENST00000496527 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
CHRD-217ENST00000496527 SMIM20Q8N5G0 67 aa10.38□□□□□ -0.75
CHRD-217ENST00000496527 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
CHRD-217ENST00000496527 KRTAP19-6Q3LI70 58 aa10.27□□□□□ -0.77
CHRD-217ENST00000496527 DMAC1Q96GE9 116 aa10.27□□□□□ -0.77
CHRD-217ENST00000496527 SPRR2GQ9BYE4 73 aa10.24□□□□□ -0.77
CHRD-217ENST00000496527 H0YAA0 97 aa10.23□□□□□ -0.77
CHRD-217ENST00000496527 CRIPTQ9P021 101 aa10.2□□□□□ -0.78
CHRD-217ENST00000496527 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
CHRD-217ENST00000496527 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.16□□□□□ -0.78
CHRD-217ENST00000496527 ADM2Q7Z4H4 148 aa10.15□□□□□ -0.78
CHRD-217ENST00000496527 Q5VV11 94 aa10.14□□□□□ -0.79
CHRD-217ENST00000496527 KRTAP19-8Q3LI54 63 aa10.13□□□□□ -0.79
CHRD-217ENST00000496527 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
CHRD-217ENST00000496527 ACYP2P14621 99 aa10.1□□□□□ -0.79
CHRD-217ENST00000496527 MT1BP07438 61 aa10.09□□□□□ -0.79
CHRD-217ENST00000496527 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
CHRD-217ENST00000496527 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
CHRD-217ENST00000496527 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
CHRD-217ENST00000496527 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
CHRD-217ENST00000496527 SPANXA2-OT1Q8N9U9 137 aa9.94□□□□□ -0.82
CHRD-217ENST00000496527 CHKB-CPT1BH3BT56 60 aa9.93□□□□□ -0.82
CHRD-217ENST00000496527 P0C880 135 aa9.93□□□□□ -0.82
CHRD-217ENST00000496527 A6NN06 94 aa9.92□□□□□ -0.82
CHRD-217ENST00000496527 R4GN34 69 aa9.88□□□□□ -0.83
CHRD-217ENST00000496527 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CHRD-217ENST00000496527 COX7CP15954 63 aa9.84□□□□□ -0.83
CHRD-217ENST00000496527 KRTAP10-5P60370 271 aa9.83□□□□□ -0.84
CHRD-217ENST00000496527 M0QZ58 72 aa9.81□□□□□ -0.84
CHRD-217ENST00000496527 MACF1Q9UPN3 7388 aaKnown RBP9.8□□□□□ -0.84
CHRD-217ENST00000496527 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
CHRD-217ENST00000496527 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
CHRD-217ENST00000496527 COA5Q86WW8 74 aa9.66□□□□□ -0.86
CHRD-217ENST00000496527 SYNE2Q8WXH0 6885 aaKnown RBP9.65□□□□□ -0.87
CHRD-217ENST00000496527 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
CHRD-217ENST00000496527 H7BZZ5 65 aa9.62□□□□□ -0.87
CHRD-217ENST00000496527 CYSTM1Q9H1C7 97 aa9.61□□□□□ -0.87
CHRD-217ENST00000496527 KRTAP6-3Q3LI67 103 aa9.6□□□□□ -0.87
CHRD-217ENST00000496527 PRO2289Q9P1D8 64 aa9.59□□□□□ -0.87
CHRD-217ENST00000496527 MT1XP80297 61 aa9.53□□□□□ -0.88
CHRD-217ENST00000496527 SEC61GP60059 68 aa9.44□□□□□ -0.9
CHRD-217ENST00000496527 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
CHRD-217ENST00000496527 SERP1Q9Y6X1 66 aa9.41□□□□□ -0.9
CHRD-217ENST00000496527 KRTAP13-4Q3LI77 160 aa9.36□□□□□ -0.91
CHRD-217ENST00000496527 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
CHRD-217ENST00000496527 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
CHRD-217ENST00000496527 KRTAP5-9P26371 169 aa9.24□□□□□ -0.93
CHRD-217ENST00000496527 A0A1B0GU33 70 aa9.22□□□□□ -0.93
CHRD-217ENST00000496527 A0A1B0GU69 56 aa9.18□□□□□ -0.94
CHRD-217ENST00000496527 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
CHRD-217ENST00000496527 A0A0D9SG42 100 aa9.15□□□□□ -0.94
CHRD-217ENST00000496527 CAMK2N1Q7Z7J9 78 aa9.14□□□□□ -0.95
CHRD-217ENST00000496527 KRTAP8-1Q8IUC2 63 aa9.12□□□□□ -0.95
CHRD-217ENST00000496527 KRTAP10-7P60409 375 aaPredicted RBP9.1□□□□□ -0.95
CHRD-217ENST00000496527 TMEM258P61165 79 aa9.09□□□□□ -0.95
CHRD-217ENST00000496527 KMT2DO14686 5537 aa9.08□□□□□ -0.96
CHRD-217ENST00000496527 MUC12Q9UKN1 5478 aa9.07□□□□□ -0.96
CHRD-217ENST00000496527 KRTAP10-12P60413 245 aa9.06□□□□□ -0.96
CHRD-217ENST00000496527 SPRR2FQ96RM1 72 aa9.06□□□□□ -0.96
CHRD-217ENST00000496527 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
CHRD-217ENST00000496527 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
CHRD-217ENST00000496527 NEBP20929 6669 aa9.04□□□□□ -0.96
CHRD-217ENST00000496527 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
CHRD-217ENST00000496527 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
CHRD-217ENST00000496527 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
CHRD-217ENST00000496527 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
CHRD-217ENST00000496527 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
CHRD-217ENST00000496527 A8MU10 97 aa8.87□□□□□ -0.99
CHRD-217ENST00000496527 SPRR2EP22531 72 aa8.87□□□□□ -0.99
CHRD-217ENST00000496527 SPRR2BP35325 72 aa8.87□□□□□ -0.99
CHRD-217ENST00000496527 SPRR2AP35326 72 aa8.87□□□□□ -0.99
CHRD-217ENST00000496527 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
CHRD-217ENST00000496527 KRTAP20-1Q3LI63 56 aa8.78□□□□□ -1
CHRD-217ENST00000496527 LCE1AQ5T7P2 110 aa8.77□□□□□ -1.01
CHRD-217ENST00000496527 UQCR11O14957 56 aa8.68□□□□□ -1.02
CHRD-217ENST00000496527 KRTAP2-3P0C7H8 128 aa8.62□□□□□ -1.03
CHRD-217ENST00000496527 KRTAP2-4Q9BYR9 128 aa8.62□□□□□ -1.03
CHRD-217ENST00000496527 V9GYY9 64 aa8.58□□□□□ -1.04
CHRD-217ENST00000496527 SPRR2DP22532 72 aa8.57□□□□□ -1.04
CHRD-217ENST00000496527 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
CHRD-217ENST00000496527 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
CHRD-217ENST00000496527 Q1T7F1 81 aa8.5□□□□□ -1.05
CHRD-217ENST00000496527 KRTAP19-7Q3SYF9 63 aa8.5□□□□□ -1.05
CHRD-217ENST00000496527 TNP1P09430 55 aa8.49□□□□□ -1.05
CHRD-217ENST00000496527 PSPHP1O15172 72 aa8.48□□□□□ -1.05
CHRD-217ENST00000496527 MT1EP04732 61 aa8.43□□□□□ -1.06
CHRD-217ENST00000496527 PCP4P48539 62 aa8.41□□□□□ -1.06
CHRD-217ENST00000496527 KRTAP19-5Q3LI72 72 aa8.38□□□□□ -1.07
CHRD-217ENST00000496527 KRTAP2-2Q9BYT5 123 aa8.36□□□□□ -1.07
CHRD-217ENST00000496527 KRTAP2-1Q9BYU5 128 aa8.36□□□□□ -1.07
CHRD-217ENST00000496527 K7ERS5 55 aa8.33□□□□□ -1.08
CHRD-217ENST00000496527 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
CHRD-217ENST00000496527 KRTAP19-3Q7Z4W3 81 aa8.32□□□□□ -1.08
CHRD-217ENST00000496527 LCE3BQ5TA77 95 aa8.31□□□□□ -1.08
CHRD-217ENST00000496527 LCE5AQ5TCM9 118 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms