RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
COMMD3-214ENST00000496071 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
COMMD3-214ENST00000496071 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
COMMD3-214ENST00000496071 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
COMMD3-214ENST00000496071 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
COMMD3-214ENST00000496071 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
COMMD3-214ENST00000496071 UQCRQO14949 82 aa7.9□□□□□ -1.14
COMMD3-214ENST00000496071 LINC00643Q86TS7 51 aa7.9□□□□□ -1.14
COMMD3-214ENST00000496071 LCA10Q71F78 164 aa7.89□□□□□ -1.15
COMMD3-214ENST00000496071 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
COMMD3-214ENST00000496071 A0A1B0GV90 55 aa7.86□□□□□ -1.15
COMMD3-214ENST00000496071 ATOX1O00244 68 aa7.86□□□□□ -1.15
COMMD3-214ENST00000496071 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
COMMD3-214ENST00000496071 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
COMMD3-214ENST00000496071 H0Y9P7 68 aa7.83□□□□□ -1.16
COMMD3-214ENST00000496071 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
COMMD3-214ENST00000496071 A0A087WVE0 104 aa7.81□□□□□ -1.16
COMMD3-214ENST00000496071 J3QR89 54 aa7.76□□□□□ -1.17
COMMD3-214ENST00000496071 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
COMMD3-214ENST00000496071 MP68P56378 58 aa7.71□□□□□ -1.18
COMMD3-214ENST00000496071 KLKP1Q107X0 134 aa7.71□□□□□ -1.18
COMMD3-214ENST00000496071 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
COMMD3-214ENST00000496071 OCR1Q9BZK8 76 aa7.7□□□□□ -1.18
COMMD3-214ENST00000496071 A8MUN3 132 aa7.69□□□□□ -1.18
COMMD3-214ENST00000496071 NDUFC1O43677 76 aa7.68□□□□□ -1.18
COMMD3-214ENST00000496071 IMUPQ9GZP8 106 aa7.67□□□□□ -1.18
COMMD3-214ENST00000496071 Q5VV11 94 aa7.65□□□□□ -1.18
COMMD3-214ENST00000496071 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
COMMD3-214ENST00000496071 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
COMMD3-214ENST00000496071 H3BPC8 53 aa7.62□□□□□ -1.19
COMMD3-214ENST00000496071 MT1BP07438 61 aa7.61□□□□□ -1.19
COMMD3-214ENST00000496071 H0YAA0 97 aa7.6□□□□□ -1.19
COMMD3-214ENST00000496071 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
COMMD3-214ENST00000496071 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.2
COMMD3-214ENST00000496071 A6NN06 94 aa7.54□□□□□ -1.2
COMMD3-214ENST00000496071 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
COMMD3-214ENST00000496071 K7ERU9 68 aa7.46□□□□□ -1.22
COMMD3-214ENST00000496071 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
COMMD3-214ENST00000496071 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
COMMD3-214ENST00000496071 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
COMMD3-214ENST00000496071 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
COMMD3-214ENST00000496071 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
COMMD3-214ENST00000496071 MT-ATP8P03928 68 aa7.41□□□□□ -1.22
COMMD3-214ENST00000496071 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
COMMD3-214ENST00000496071 C20orf197Q8N268 126 aa7.37□□□□□ -1.23
COMMD3-214ENST00000496071 ACYP2P14621 99 aa7.33□□□□□ -1.24
COMMD3-214ENST00000496071 R4GN34 69 aa7.32□□□□□ -1.24
COMMD3-214ENST00000496071 P0C880 135 aa7.3□□□□□ -1.24
COMMD3-214ENST00000496071 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
COMMD3-214ENST00000496071 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
COMMD3-214ENST00000496071 M0QZ58 72 aa7.24□□□□□ -1.25
COMMD3-214ENST00000496071 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
COMMD3-214ENST00000496071 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
COMMD3-214ENST00000496071 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
COMMD3-214ENST00000496071 MT1XP80297 61 aa7.15□□□□□ -1.26
COMMD3-214ENST00000496071 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
COMMD3-214ENST00000496071 SPANXA2-OT1Q8N9U9 137 aa7.14□□□□□ -1.27
COMMD3-214ENST00000496071 KRTAP5-9P26371 169 aa7.13□□□□□ -1.27
COMMD3-214ENST00000496071 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
COMMD3-214ENST00000496071 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
COMMD3-214ENST00000496071 NEBP20929 6669 aa6.96□□□□□ -1.3
COMMD3-214ENST00000496071 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
COMMD3-214ENST00000496071 COX7CP15954 63 aa6.93□□□□□ -1.3
COMMD3-214ENST00000496071 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
COMMD3-214ENST00000496071 COA5Q86WW8 74 aa6.91□□□□□ -1.3
COMMD3-214ENST00000496071 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
COMMD3-214ENST00000496071 KMT2DO14686 5537 aa6.89□□□□□ -1.31
COMMD3-214ENST00000496071 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
COMMD3-214ENST00000496071 SEC61GP60059 68 aa6.83□□□□□ -1.32
COMMD3-214ENST00000496071 KRTAP10-7P60409 375 aaPredicted RBP6.82□□□□□ -1.32
COMMD3-214ENST00000496071 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
COMMD3-214ENST00000496071 SPRR2EP22531 72 aa6.81□□□□□ -1.32
COMMD3-214ENST00000496071 SPRR2BP35325 72 aa6.81□□□□□ -1.32
COMMD3-214ENST00000496071 SPRR2AP35326 72 aa6.81□□□□□ -1.32
COMMD3-214ENST00000496071 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
COMMD3-214ENST00000496071 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
COMMD3-214ENST00000496071 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
COMMD3-214ENST00000496071 H7BZZ5 65 aa6.8□□□□□ -1.32
COMMD3-214ENST00000496071 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
COMMD3-214ENST00000496071 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
COMMD3-214ENST00000496071 CYSTM1Q9H1C7 97 aa6.74□□□□□ -1.33
COMMD3-214ENST00000496071 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
COMMD3-214ENST00000496071 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
COMMD3-214ENST00000496071 LCE1AQ5T7P2 110 aa6.72□□□□□ -1.33
COMMD3-214ENST00000496071 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
COMMD3-214ENST00000496071 A0A1B0GU33 70 aa6.67□□□□□ -1.34
COMMD3-214ENST00000496071 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
COMMD3-214ENST00000496071 A0A0D9SG42 100 aa6.63□□□□□ -1.35
COMMD3-214ENST00000496071 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
COMMD3-214ENST00000496071 A0A1B0GU69 56 aa6.59□□□□□ -1.35
COMMD3-214ENST00000496071 SPRR2DP22532 72 aa6.58□□□□□ -1.36
COMMD3-214ENST00000496071 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
COMMD3-214ENST00000496071 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
COMMD3-214ENST00000496071 KRTAP12-1P59990 96 aa6.52□□□□□ -1.37
COMMD3-214ENST00000496071 KRTAP2-2Q9BYT5 123 aa6.52□□□□□ -1.37
COMMD3-214ENST00000496071 KRTAP2-1Q9BYU5 128 aa6.52□□□□□ -1.37
COMMD3-214ENST00000496071 SMIM26A0A096LP01 95 aa6.51□□□□□ -1.37
COMMD3-214ENST00000496071 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
COMMD3-214ENST00000496071 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
COMMD3-214ENST00000496071 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms