RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 RYR1P21817 5038 aa5□□□□□ -1.61
TM9SF4-207ENST00000495749 Q5VSD8 79 aa4.98□□□□□ -1.61
TM9SF4-207ENST00000495749 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
TM9SF4-207ENST00000495749 HSPG2P98160 4391 aa4.94□□□□□ -1.62
TM9SF4-207ENST00000495749 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
TM9SF4-207ENST00000495749 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
TM9SF4-207ENST00000495749 J3QL48 77 aa4.88□□□□□ -1.63
TM9SF4-207ENST00000495749 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
TM9SF4-207ENST00000495749 ROMO1P60602 79 aa4.87□□□□□ -1.63
TM9SF4-207ENST00000495749 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
TM9SF4-207ENST00000495749 H0YAA0 97 aa4.86□□□□□ -1.63
TM9SF4-207ENST00000495749 A8MUU9 505 aa4.85□□□□□ -1.63
TM9SF4-207ENST00000495749 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
TM9SF4-207ENST00000495749 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
TM9SF4-207ENST00000495749 A0A1B0GU33 70 aa4.83□□□□□ -1.64
TM9SF4-207ENST00000495749 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
TM9SF4-207ENST00000495749 TNXBP22105 4242 aa4.82□□□□□ -1.64
TM9SF4-207ENST00000495749 P0C880 135 aa4.8□□□□□ -1.64
TM9SF4-207ENST00000495749 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
TM9SF4-207ENST00000495749 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
TM9SF4-207ENST00000495749 LRP2P98164 4655 aa4.77□□□□□ -1.65
TM9SF4-207ENST00000495749 LPAP08519 4548 aa4.76□□□□□ -1.65
TM9SF4-207ENST00000495749 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
TM9SF4-207ENST00000495749 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
TM9SF4-207ENST00000495749 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
TM9SF4-207ENST00000495749 COX6B2Q6YFQ2 88 aa4.75□□□□□ -1.65
TM9SF4-207ENST00000495749 XP32Q5T750 250 aa4.73□□□□□ -1.65
TM9SF4-207ENST00000495749 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
TM9SF4-207ENST00000495749 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
TM9SF4-207ENST00000495749 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
TM9SF4-207ENST00000495749 K7ERS5 55 aa4.68□□□□□ -1.66
TM9SF4-207ENST00000495749 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
TM9SF4-207ENST00000495749 HERC1Q15751 4861 aa4.66□□□□□ -1.66
TM9SF4-207ENST00000495749 A0A0D9SG42 100 aa4.64□□□□□ -1.67
TM9SF4-207ENST00000495749 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
TM9SF4-207ENST00000495749 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
TM9SF4-207ENST00000495749 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
TM9SF4-207ENST00000495749 MUC2Q02817 5179 aa4.62□□□□□ -1.67
TM9SF4-207ENST00000495749 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
TM9SF4-207ENST00000495749 S4R3F8 94 aa4.59□□□□□ -1.68
TM9SF4-207ENST00000495749 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
TM9SF4-207ENST00000495749 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
TM9SF4-207ENST00000495749 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
TM9SF4-207ENST00000495749 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
TM9SF4-207ENST00000495749 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.69
TM9SF4-207ENST00000495749 LCE2BO14633 110 aa4.44□□□□□ -1.7
TM9SF4-207ENST00000495749 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
TM9SF4-207ENST00000495749 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
TM9SF4-207ENST00000495749 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
TM9SF4-207ENST00000495749 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
TM9SF4-207ENST00000495749 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
TM9SF4-207ENST00000495749 M0QZ58 72 aa4.36□□□□□ -1.71
TM9SF4-207ENST00000495749 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
TM9SF4-207ENST00000495749 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
TM9SF4-207ENST00000495749 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
TM9SF4-207ENST00000495749 R4GN34 69 aa4.29□□□□□ -1.72
TM9SF4-207ENST00000495749 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
TM9SF4-207ENST00000495749 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.74
TM9SF4-207ENST00000495749 M0R2T5 61 aa4.18□□□□□ -1.74
TM9SF4-207ENST00000495749 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
TM9SF4-207ENST00000495749 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
TM9SF4-207ENST00000495749 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
TM9SF4-207ENST00000495749 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
TM9SF4-207ENST00000495749 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
TM9SF4-207ENST00000495749 MT1HP80294 61 aa4□□□□□ -1.77
TM9SF4-207ENST00000495749 PP632Q6XCG6 107 aa4□□□□□ -1.77
TM9SF4-207ENST00000495749 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
TM9SF4-207ENST00000495749 MT1FP04733 61 aa3.93□□□□□ -1.78
TM9SF4-207ENST00000495749 TNP1P09430 55 aa3.92□□□□□ -1.78
TM9SF4-207ENST00000495749 MT2AP02795 61 aa3.9□□□□□ -1.78
TM9SF4-207ENST00000495749 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
TM9SF4-207ENST00000495749 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
TM9SF4-207ENST00000495749 USH2AO75445 5202 aa3.89□□□□□ -1.79
TM9SF4-207ENST00000495749 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
TM9SF4-207ENST00000495749 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
TM9SF4-207ENST00000495749 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
TM9SF4-207ENST00000495749 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
TM9SF4-207ENST00000495749 SPRR2GQ9BYE4 73 aa3.82□□□□□ -1.8
TM9SF4-207ENST00000495749 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
TM9SF4-207ENST00000495749 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
TM9SF4-207ENST00000495749 KMT2DO14686 5537 aa3.71□□□□□ -1.81
TM9SF4-207ENST00000495749 MT1BP07438 61 aa3.71□□□□□ -1.81
TM9SF4-207ENST00000495749 LCE3AQ5TA76 89 aa3.71□□□□□ -1.81
TM9SF4-207ENST00000495749 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
TM9SF4-207ENST00000495749 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
TM9SF4-207ENST00000495749 MT1XP80297 61 aa3.65□□□□□ -1.83
TM9SF4-207ENST00000495749 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.83
TM9SF4-207ENST00000495749 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
TM9SF4-207ENST00000495749 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
TM9SF4-207ENST00000495749 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
TM9SF4-207ENST00000495749 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
TM9SF4-207ENST00000495749 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
TM9SF4-207ENST00000495749 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
TM9SF4-207ENST00000495749 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
TM9SF4-207ENST00000495749 INE1O15225 51 aa3.49□□□□□ -1.85
TM9SF4-207ENST00000495749 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
TM9SF4-207ENST00000495749 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
TM9SF4-207ENST00000495749 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
TM9SF4-207ENST00000495749 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
TM9SF4-207ENST00000495749 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms