RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 LPAP08519 4548 aa5.69□□□□□ -1.5
SAMM50-206ENST00000494795 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
SAMM50-206ENST00000494795 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
SAMM50-206ENST00000494795 SPAG11AQ6PDA7 123 aa5.66□□□□□ -1.5
SAMM50-206ENST00000494795 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.51
SAMM50-206ENST00000494795 KRTAP10-8P60410 259 aa5.63□□□□□ -1.51
SAMM50-206ENST00000494795 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
SAMM50-206ENST00000494795 LRP2P98164 4655 aa5.6□□□□□ -1.51
SAMM50-206ENST00000494795 SPINK7P58062 85 aa5.59□□□□□ -1.52
SAMM50-206ENST00000494795 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
SAMM50-206ENST00000494795 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
SAMM50-206ENST00000494795 A8MUU9 505 aa5.57□□□□□ -1.52
SAMM50-206ENST00000494795 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
SAMM50-206ENST00000494795 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
SAMM50-206ENST00000494795 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
SAMM50-206ENST00000494795 ACYP2P14621 99 aa5.53□□□□□ -1.52
SAMM50-206ENST00000494795 HERC2O95714 4834 aa5.49□□□□□ -1.53
SAMM50-206ENST00000494795 XP32Q5T750 250 aa5.47□□□□□ -1.53
SAMM50-206ENST00000494795 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
SAMM50-206ENST00000494795 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.55
SAMM50-206ENST00000494795 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.55
SAMM50-206ENST00000494795 MUC2Q02817 5179 aa5.39□□□□□ -1.55
SAMM50-206ENST00000494795 ROMO1P60602 79 aa5.39□□□□□ -1.55
SAMM50-206ENST00000494795 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
SAMM50-206ENST00000494795 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
SAMM50-206ENST00000494795 HERC1Q15751 4861 aa5.36□□□□□ -1.55
SAMM50-206ENST00000494795 A0A1B0GU69 56 aa5.35□□□□□ -1.55
SAMM50-206ENST00000494795 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
SAMM50-206ENST00000494795 UQCR11O14957 56 aa5.27□□□□□ -1.57
SAMM50-206ENST00000494795 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
SAMM50-206ENST00000494795 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
SAMM50-206ENST00000494795 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
SAMM50-206ENST00000494795 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
SAMM50-206ENST00000494795 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
SAMM50-206ENST00000494795 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
SAMM50-206ENST00000494795 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
SAMM50-206ENST00000494795 P0C880 135 aa5.19□□□□□ -1.58
SAMM50-206ENST00000494795 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
SAMM50-206ENST00000494795 H0YAA0 97 aa5.19□□□□□ -1.58
SAMM50-206ENST00000494795 S4R3F8 94 aa5.16□□□□□ -1.58
SAMM50-206ENST00000494795 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.58
SAMM50-206ENST00000494795 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.59
SAMM50-206ENST00000494795 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
SAMM50-206ENST00000494795 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
SAMM50-206ENST00000494795 A0A1B0GU33 70 aa5.13□□□□□ -1.59
SAMM50-206ENST00000494795 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
SAMM50-206ENST00000494795 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
SAMM50-206ENST00000494795 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
SAMM50-206ENST00000494795 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
SAMM50-206ENST00000494795 K7ERS5 55 aa5.06□□□□□ -1.6
SAMM50-206ENST00000494795 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
SAMM50-206ENST00000494795 A0A0D9SG42 100 aa5.04□□□□□ -1.6
SAMM50-206ENST00000494795 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
SAMM50-206ENST00000494795 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
SAMM50-206ENST00000494795 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
SAMM50-206ENST00000494795 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
SAMM50-206ENST00000494795 M0QZ58 72 aa4.83□□□□□ -1.64
SAMM50-206ENST00000494795 R4GN34 69 aa4.78□□□□□ -1.64
SAMM50-206ENST00000494795 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
SAMM50-206ENST00000494795 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SAMM50-206ENST00000494795 MT1HP80294 61 aa4.69□□□□□ -1.66
SAMM50-206ENST00000494795 M0R2T5 61 aa4.65□□□□□ -1.67
SAMM50-206ENST00000494795 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
SAMM50-206ENST00000494795 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
SAMM50-206ENST00000494795 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
SAMM50-206ENST00000494795 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
SAMM50-206ENST00000494795 MT1FP04733 61 aa4.59□□□□□ -1.68
SAMM50-206ENST00000494795 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
SAMM50-206ENST00000494795 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
SAMM50-206ENST00000494795 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
SAMM50-206ENST00000494795 MT2AP02795 61 aa4.56□□□□□ -1.68
SAMM50-206ENST00000494795 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
SAMM50-206ENST00000494795 USH2AO75445 5202 aa4.51□□□□□ -1.69
SAMM50-206ENST00000494795 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
SAMM50-206ENST00000494795 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
SAMM50-206ENST00000494795 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
SAMM50-206ENST00000494795 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
SAMM50-206ENST00000494795 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
SAMM50-206ENST00000494795 MT1BP07438 61 aa4.36□□□□□ -1.71
SAMM50-206ENST00000494795 KMT2DO14686 5537 aa4.31□□□□□ -1.72
SAMM50-206ENST00000494795 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
SAMM50-206ENST00000494795 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
SAMM50-206ENST00000494795 MT1XP80297 61 aa4.27□□□□□ -1.73
SAMM50-206ENST00000494795 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
SAMM50-206ENST00000494795 TNP1P09430 55 aa4.26□□□□□ -1.73
SAMM50-206ENST00000494795 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
SAMM50-206ENST00000494795 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
SAMM50-206ENST00000494795 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
SAMM50-206ENST00000494795 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
SAMM50-206ENST00000494795 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
SAMM50-206ENST00000494795 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SAMM50-206ENST00000494795 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
SAMM50-206ENST00000494795 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
SAMM50-206ENST00000494795 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
SAMM50-206ENST00000494795 LCE1FQ5T754 118 aa4□□□□□ -1.77
SAMM50-206ENST00000494795 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
SAMM50-206ENST00000494795 INE1O15225 51 aa3.98□□□□□ -1.77
SAMM50-206ENST00000494795 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
SAMM50-206ENST00000494795 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
SAMM50-206ENST00000494795 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms