RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 SSPOA2VEC9 5147 aa9.59□□□□□ -0.87
CCDC12-207ENST00000494655 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
CCDC12-207ENST00000494655 NDUFC1O43677 76 aa9.56□□□□□ -0.88
CCDC12-207ENST00000494655 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
CCDC12-207ENST00000494655 KRTAP3-3Q9BYR6 98 aa9.54□□□□□ -0.88
CCDC12-207ENST00000494655 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
CCDC12-207ENST00000494655 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
CCDC12-207ENST00000494655 KRTAP19-6Q3LI70 58 aa9.42□□□□□ -0.9
CCDC12-207ENST00000494655 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
CCDC12-207ENST00000494655 CRIPTQ9P021 101 aa9.39□□□□□ -0.91
CCDC12-207ENST00000494655 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
CCDC12-207ENST00000494655 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.37□□□□□ -0.91
CCDC12-207ENST00000494655 H0YAA0 97 aa9.37□□□□□ -0.91
CCDC12-207ENST00000494655 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
CCDC12-207ENST00000494655 FCGBPQ9Y6R7 5405 aaPredicted RBP9.36□□□□□ -0.91
CCDC12-207ENST00000494655 Q5VV11 94 aa9.34□□□□□ -0.91
CCDC12-207ENST00000494655 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
CCDC12-207ENST00000494655 KRTAP19-8Q3LI54 63 aa9.25□□□□□ -0.93
CCDC12-207ENST00000494655 ACYP2P14621 99 aa9.22□□□□□ -0.93
CCDC12-207ENST00000494655 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
CCDC12-207ENST00000494655 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
CCDC12-207ENST00000494655 MT1BP07438 61 aa9.2□□□□□ -0.94
CCDC12-207ENST00000494655 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
CCDC12-207ENST00000494655 SERP2Q8N6R1 65 aa9.17□□□□□ -0.94
CCDC12-207ENST00000494655 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
CCDC12-207ENST00000494655 A6NN06 94 aa9.15□□□□□ -0.94
CCDC12-207ENST00000494655 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
CCDC12-207ENST00000494655 MACF1Q9UPN3 7388 aaKnown RBP9.11□□□□□ -0.95
CCDC12-207ENST00000494655 R4GN34 69 aa9.09□□□□□ -0.95
CCDC12-207ENST00000494655 SPANXA2-OT1Q8N9U9 137 aa9.06□□□□□ -0.96
CCDC12-207ENST00000494655 P0C880 135 aa9.03□□□□□ -0.96
CCDC12-207ENST00000494655 M0QZ58 72 aa9.01□□□□□ -0.97
CCDC12-207ENST00000494655 KRTAP10-5P60370 271 aa9□□□□□ -0.97
CCDC12-207ENST00000494655 SYNE2Q8WXH0 6885 aaKnown RBP8.96□□□□□ -0.98
CCDC12-207ENST00000494655 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
CCDC12-207ENST00000494655 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
CCDC12-207ENST00000494655 COX7CP15954 63 aa8.93□□□□□ -0.98
CCDC12-207ENST00000494655 PRO2289Q9P1D8 64 aa8.88□□□□□ -0.99
CCDC12-207ENST00000494655 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
CCDC12-207ENST00000494655 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
CCDC12-207ENST00000494655 COA5Q86WW8 74 aa8.79□□□□□ -1
CCDC12-207ENST00000494655 ANAPC13Q9BS18 74 aa8.76□□□□□ -1.01
CCDC12-207ENST00000494655 H7BZZ5 65 aa8.72□□□□□ -1.01
CCDC12-207ENST00000494655 MT1XP80297 61 aa8.69□□□□□ -1.02
CCDC12-207ENST00000494655 SEC61GP60059 68 aa8.68□□□□□ -1.02
CCDC12-207ENST00000494655 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
CCDC12-207ENST00000494655 SERP1Q9Y6X1 66 aa8.63□□□□□ -1.03
CCDC12-207ENST00000494655 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
CCDC12-207ENST00000494655 KRTAP5-9P26371 169 aa8.49□□□□□ -1.05
CCDC12-207ENST00000494655 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
CCDC12-207ENST00000494655 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
CCDC12-207ENST00000494655 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
CCDC12-207ENST00000494655 A0A1B0GU33 70 aa8.42□□□□□ -1.06
CCDC12-207ENST00000494655 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
CCDC12-207ENST00000494655 NEBP20929 6669 aa8.4□□□□□ -1.06
CCDC12-207ENST00000494655 A0A1B0GU69 56 aa8.4□□□□□ -1.06
CCDC12-207ENST00000494655 KRTAP8-1Q8IUC2 63 aa8.4□□□□□ -1.06
CCDC12-207ENST00000494655 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
CCDC12-207ENST00000494655 A0A0D9SG42 100 aa8.36□□□□□ -1.07
CCDC12-207ENST00000494655 SPRR2FQ96RM1 72 aa8.35□□□□□ -1.07
CCDC12-207ENST00000494655 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
CCDC12-207ENST00000494655 KMT2DO14686 5537 aa8.33□□□□□ -1.08
CCDC12-207ENST00000494655 KRTAP10-7P60409 375 aaPredicted RBP8.29□□□□□ -1.08
CCDC12-207ENST00000494655 TMEM258P61165 79 aa8.28□□□□□ -1.08
CCDC12-207ENST00000494655 KRTAP10-12P60413 245 aa8.27□□□□□ -1.09
CCDC12-207ENST00000494655 PRR15LQ9BU68 103 aa8.27□□□□□ -1.09
CCDC12-207ENST00000494655 SPINT4Q6UDR6 99 aa8.25□□□□□ -1.09
CCDC12-207ENST00000494655 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
CCDC12-207ENST00000494655 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
CCDC12-207ENST00000494655 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
CCDC12-207ENST00000494655 MDN1Q9NU22 5596 aa8.18□□□□□ -1.1
CCDC12-207ENST00000494655 SPRR2EP22531 72 aa8.18□□□□□ -1.1
CCDC12-207ENST00000494655 SPRR2BP35325 72 aa8.18□□□□□ -1.1
CCDC12-207ENST00000494655 SPRR2AP35326 72 aa8.18□□□□□ -1.1
CCDC12-207ENST00000494655 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
CCDC12-207ENST00000494655 KRTAP20-1Q3LI63 56 aa8.13□□□□□ -1.11
CCDC12-207ENST00000494655 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
CCDC12-207ENST00000494655 A8MU10 97 aa8.05□□□□□ -1.12
CCDC12-207ENST00000494655 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
CCDC12-207ENST00000494655 KRTAP2-3P0C7H8 128 aa7.95□□□□□ -1.14
CCDC12-207ENST00000494655 KRTAP2-4Q9BYR9 128 aa7.95□□□□□ -1.14
CCDC12-207ENST00000494655 UQCR11O14957 56 aa7.93□□□□□ -1.14
CCDC12-207ENST00000494655 SPRR2DP22532 72 aa7.92□□□□□ -1.14
CCDC12-207ENST00000494655 V9GYY9 64 aa7.84□□□□□ -1.15
CCDC12-207ENST00000494655 TNP1P09430 55 aa7.79□□□□□ -1.16
CCDC12-207ENST00000494655 MIR22HGQ0VDD5 57 aa7.76□□□□□ -1.17
CCDC12-207ENST00000494655 KRTAP19-7Q3SYF9 63 aa7.75□□□□□ -1.17
CCDC12-207ENST00000494655 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
CCDC12-207ENST00000494655 MT1EP04732 61 aa7.71□□□□□ -1.18
CCDC12-207ENST00000494655 PSPHP1O15172 72 aa7.7□□□□□ -1.18
CCDC12-207ENST00000494655 Q1T7F1 81 aa7.7□□□□□ -1.18
CCDC12-207ENST00000494655 KRTAP2-2Q9BYT5 123 aa7.7□□□□□ -1.18
CCDC12-207ENST00000494655 KRTAP2-1Q9BYU5 128 aa7.7□□□□□ -1.18
CCDC12-207ENST00000494655 K7ERS5 55 aa7.69□□□□□ -1.18
CCDC12-207ENST00000494655 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
CCDC12-207ENST00000494655 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
CCDC12-207ENST00000494655 KRTAP19-3Q7Z4W3 81 aa7.63□□□□□ -1.19
CCDC12-207ENST00000494655 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
CCDC12-207ENST00000494655 LCE5AQ5TCM9 118 aa7.59□□□□□ -1.19
CCDC12-207ENST00000494655 PCP4P48539 62 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms