RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 S4R3F8 94 aa4.4□□□□□ -1.71
MSH5-218ENST00000494646 ETDBQ3ZM63 59 aa4.37□□□□□ -1.71
MSH5-218ENST00000494646 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
MSH5-218ENST00000494646 LCA10Q71F78 164 aa4.37□□□□□ -1.71
MSH5-218ENST00000494646 ANAPC13Q9BS18 74 aa4.37□□□□□ -1.71
MSH5-218ENST00000494646 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
MSH5-218ENST00000494646 F8W1H4 67 aa4.36□□□□□ -1.71
MSH5-218ENST00000494646 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
MSH5-218ENST00000494646 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
MSH5-218ENST00000494646 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
MSH5-218ENST00000494646 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
MSH5-218ENST00000494646 A0A1B0GV90 55 aa4.33□□□□□ -1.72
MSH5-218ENST00000494646 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
MSH5-218ENST00000494646 CYP4F30PQ9H0H9 118 aa4.32□□□□□ -1.72
MSH5-218ENST00000494646 A0A087WVE0 104 aa4.31□□□□□ -1.72
MSH5-218ENST00000494646 MT1BP07438 61 aa4.31□□□□□ -1.72
MSH5-218ENST00000494646 A6NN06 94 aa4.3□□□□□ -1.72
MSH5-218ENST00000494646 Q5VV11 94 aa4.3□□□□□ -1.72
MSH5-218ENST00000494646 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
MSH5-218ENST00000494646 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
MSH5-218ENST00000494646 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
MSH5-218ENST00000494646 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
MSH5-218ENST00000494646 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
MSH5-218ENST00000494646 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
MSH5-218ENST00000494646 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
MSH5-218ENST00000494646 ACYP1P07311 99 aa4.24□□□□□ -1.73
MSH5-218ENST00000494646 NEBP20929 6669 aa4.24□□□□□ -1.73
MSH5-218ENST00000494646 A8MUN3 132 aa4.23□□□□□ -1.73
MSH5-218ENST00000494646 KMT2DO14686 5537 aa4.22□□□□□ -1.73
MSH5-218ENST00000494646 H0Y9P7 68 aa4.22□□□□□ -1.73
MSH5-218ENST00000494646 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
MSH5-218ENST00000494646 UQCRQO14949 82 aa4.21□□□□□ -1.74
MSH5-218ENST00000494646 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
MSH5-218ENST00000494646 NDUFC1O43677 76 aa4.19□□□□□ -1.74
MSH5-218ENST00000494646 IMUPQ9GZP8 106 aa4.19□□□□□ -1.74
MSH5-218ENST00000494646 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
MSH5-218ENST00000494646 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
MSH5-218ENST00000494646 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
MSH5-218ENST00000494646 ATOX1O00244 68 aa4.17□□□□□ -1.74
MSH5-218ENST00000494646 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
MSH5-218ENST00000494646 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
MSH5-218ENST00000494646 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
MSH5-218ENST00000494646 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
MSH5-218ENST00000494646 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
MSH5-218ENST00000494646 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
MSH5-218ENST00000494646 H0YAA0 97 aa4.12□□□□□ -1.75
MSH5-218ENST00000494646 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
MSH5-218ENST00000494646 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
MSH5-218ENST00000494646 K7ERU9 68 aa4.07□□□□□ -1.76
MSH5-218ENST00000494646 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
MSH5-218ENST00000494646 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
MSH5-218ENST00000494646 K7ERS5 55 aa4.04□□□□□ -1.76
MSH5-218ENST00000494646 P0C880 135 aa4.04□□□□□ -1.76
MSH5-218ENST00000494646 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
MSH5-218ENST00000494646 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
MSH5-218ENST00000494646 R4GN34 69 aa4.03□□□□□ -1.76
MSH5-218ENST00000494646 MT1XP80297 61 aa4.02□□□□□ -1.77
MSH5-218ENST00000494646 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
MSH5-218ENST00000494646 H3BPC8 53 aa4□□□□□ -1.77
MSH5-218ENST00000494646 M0QZ58 72 aa4□□□□□ -1.77
MSH5-218ENST00000494646 LINC01554Q52M75 96 aa4□□□□□ -1.77
MSH5-218ENST00000494646 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
MSH5-218ENST00000494646 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
MSH5-218ENST00000494646 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
MSH5-218ENST00000494646 J3QR89 54 aa3.97□□□□□ -1.77
MSH5-218ENST00000494646 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
MSH5-218ENST00000494646 A6NED7 52 aa3.96□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
MSH5-218ENST00000494646 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
MSH5-218ENST00000494646 SPRR2EP22531 72 aa3.94□□□□□ -1.78
MSH5-218ENST00000494646 SPRR2BP35325 72 aa3.94□□□□□ -1.78
MSH5-218ENST00000494646 SPRR2AP35326 72 aa3.94□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
MSH5-218ENST00000494646 ACYP2P14621 99 aa3.92□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
MSH5-218ENST00000494646 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
MSH5-218ENST00000494646 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
MSH5-218ENST00000494646 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
MSH5-218ENST00000494646 MT-ATP8P03928 68 aa3.88□□□□□ -1.79
MSH5-218ENST00000494646 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
MSH5-218ENST00000494646 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
MSH5-218ENST00000494646 CHKB-CPT1BH3BT56 60 aa3.85□□□□□ -1.79
MSH5-218ENST00000494646 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
MSH5-218ENST00000494646 SNURFQ9Y675 71 aa3.84□□□□□ -1.79
MSH5-218ENST00000494646 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
MSH5-218ENST00000494646 SPRR2DP22532 72 aa3.8□□□□□ -1.8
MSH5-218ENST00000494646 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
MSH5-218ENST00000494646 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
MSH5-218ENST00000494646 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
MSH5-218ENST00000494646 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
MSH5-218ENST00000494646 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
MSH5-218ENST00000494646 A0A1B0GU33 70 aa3.74□□□□□ -1.81
MSH5-218ENST00000494646 MT3P25713 68 aa3.74□□□□□ -1.81
MSH5-218ENST00000494646 TMEM258P61165 79 aa3.71□□□□□ -1.82
MSH5-218ENST00000494646 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
MSH5-218ENST00000494646 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
MSH5-218ENST00000494646 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms