RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 H3BPC8 53 aa10.86□□□□□ -0.67
CLIC3-203ENST00000494426 SSPOA2VEC9 5147 aa10.82□□□□□ -0.68
CLIC3-203ENST00000494426 FAM236AA0A1B0GUQ0 79 aa10.78□□□□□ -0.68
CLIC3-203ENST00000494426 FAM236BA0A1B0GV22 79 aa10.78□□□□□ -0.68
CLIC3-203ENST00000494426 A8MUN3 132 aa10.78□□□□□ -0.68
CLIC3-203ENST00000494426 TRAV7A0A075B6U4 112 aa10.72□□□□□ -0.69
CLIC3-203ENST00000494426 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
CLIC3-203ENST00000494426 KRTAP19-1Q8IUB9 90 aa10.69□□□□□ -0.7
CLIC3-203ENST00000494426 NDUFC1O43677 76 aa10.68□□□□□ -0.7
CLIC3-203ENST00000494426 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
CLIC3-203ENST00000494426 FCGBPQ9Y6R7 5405 aaPredicted RBP10.57□□□□□ -0.72
CLIC3-203ENST00000494426 KRTAP19-6Q3LI70 58 aa10.56□□□□□ -0.72
CLIC3-203ENST00000494426 SPRR2GQ9BYE4 73 aa10.56□□□□□ -0.72
CLIC3-203ENST00000494426 H0YAA0 97 aa10.54□□□□□ -0.72
CLIC3-203ENST00000494426 SYNE2Q8WXH0 6885 aaKnown RBP10.51□□□□□ -0.73
CLIC3-203ENST00000494426 SNURFQ9Y675 71 aa10.48□□□□□ -0.73
CLIC3-203ENST00000494426 MACF1Q9UPN3 7388 aaKnown RBP10.47□□□□□ -0.73
CLIC3-203ENST00000494426 KRTAP19-8Q3LI54 63 aa10.47□□□□□ -0.73
CLIC3-203ENST00000494426 SERP2Q8N6R1 65 aa10.46□□□□□ -0.73
CLIC3-203ENST00000494426 CRIPTQ9P021 101 aa10.45□□□□□ -0.74
CLIC3-203ENST00000494426 MT1BP07438 61 aa10.44□□□□□ -0.74
CLIC3-203ENST00000494426 ADM2Q7Z4H4 148 aa10.44□□□□□ -0.74
CLIC3-203ENST00000494426 ACYP2P14621 99 aa10.4□□□□□ -0.74
CLIC3-203ENST00000494426 C20orf197Q8N268 126 aa10.4□□□□□ -0.74
CLIC3-203ENST00000494426 Q5VV11 94 aa10.38□□□□□ -0.75
CLIC3-203ENST00000494426 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
CLIC3-203ENST00000494426 P0C880 135 aa10.27□□□□□ -0.77
CLIC3-203ENST00000494426 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
CLIC3-203ENST00000494426 COX7CP15954 63 aa10.23□□□□□ -0.77
CLIC3-203ENST00000494426 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
CLIC3-203ENST00000494426 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
CLIC3-203ENST00000494426 A6NN06 94 aa10.14□□□□□ -0.79
CLIC3-203ENST00000494426 KRTAP10-5P60370 271 aa10.12□□□□□ -0.79
CLIC3-203ENST00000494426 R4GN34 69 aa10.11□□□□□ -0.79
CLIC3-203ENST00000494426 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
CLIC3-203ENST00000494426 M0QZ58 72 aa10.07□□□□□ -0.8
CLIC3-203ENST00000494426 KRTAP6-3Q3LI67 103 aa10.07□□□□□ -0.8
CLIC3-203ENST00000494426 H7BZZ5 65 aa10.02□□□□□ -0.81
CLIC3-203ENST00000494426 COA5Q86WW8 74 aa9.99□□□□□ -0.81
CLIC3-203ENST00000494426 ANAPC13Q9BS18 74 aa9.99□□□□□ -0.81
CLIC3-203ENST00000494426 NEBP20929 6669 aa9.95□□□□□ -0.82
CLIC3-203ENST00000494426 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
CLIC3-203ENST00000494426 LINC01554Q52M75 96 aa9.89□□□□□ -0.83
CLIC3-203ENST00000494426 MT1XP80297 61 aa9.85□□□□□ -0.83
CLIC3-203ENST00000494426 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
CLIC3-203ENST00000494426 KRTAP20-1Q3LI63 56 aa9.8□□□□□ -0.84
CLIC3-203ENST00000494426 PRO2289Q9P1D8 64 aa9.77□□□□□ -0.85
CLIC3-203ENST00000494426 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
CLIC3-203ENST00000494426 MUC12Q9UKN1 5478 aa9.69□□□□□ -0.86
CLIC3-203ENST00000494426 SEC61GP60059 68 aa9.63□□□□□ -0.87
CLIC3-203ENST00000494426 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
CLIC3-203ENST00000494426 ATP5EP56381 51 aaPredicted RBP9.55□□□□□ -0.88
CLIC3-203ENST00000494426 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
CLIC3-203ENST00000494426 KRTAP5-9P26371 169 aa9.51□□□□□ -0.89
CLIC3-203ENST00000494426 A0A1B0GU33 70 aa9.5□□□□□ -0.89
CLIC3-203ENST00000494426 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
CLIC3-203ENST00000494426 A0A1B0GU69 56 aa9.45□□□□□ -0.9
CLIC3-203ENST00000494426 KMT2DO14686 5537 aa9.44□□□□□ -0.9
CLIC3-203ENST00000494426 TMEM258P61165 79 aa9.43□□□□□ -0.9
CLIC3-203ENST00000494426 KRTAP10-7P60409 375 aaPredicted RBP9.42□□□□□ -0.9
CLIC3-203ENST00000494426 A0A0D9SG42 100 aa9.41□□□□□ -0.9
CLIC3-203ENST00000494426 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
CLIC3-203ENST00000494426 KRTAP10-12P60413 245 aa9.36□□□□□ -0.91
CLIC3-203ENST00000494426 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
CLIC3-203ENST00000494426 CAMK2N1Q7Z7J9 78 aa9.33□□□□□ -0.92
CLIC3-203ENST00000494426 KRTAP8-1Q8IUC2 63 aa9.32□□□□□ -0.92
CLIC3-203ENST00000494426 KRTAP2-3P0C7H8 128 aa9.29□□□□□ -0.92
CLIC3-203ENST00000494426 KRTAP2-4Q9BYR9 128 aa9.29□□□□□ -0.92
CLIC3-203ENST00000494426 MDN1Q9NU22 5596 aa9.29□□□□□ -0.92
CLIC3-203ENST00000494426 LINC01558Q9Y6Z2 57 aa9.28□□□□□ -0.92
CLIC3-203ENST00000494426 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
CLIC3-203ENST00000494426 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
CLIC3-203ENST00000494426 SPRR2FQ96RM1 72 aa9.26□□□□□ -0.93
CLIC3-203ENST00000494426 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
CLIC3-203ENST00000494426 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
CLIC3-203ENST00000494426 A8MU10 97 aa9.2□□□□□ -0.94
CLIC3-203ENST00000494426 SPRR2EP22531 72 aa9.06□□□□□ -0.96
CLIC3-203ENST00000494426 SPRR2BP35325 72 aa9.06□□□□□ -0.96
CLIC3-203ENST00000494426 SPRR2AP35326 72 aa9.06□□□□□ -0.96
CLIC3-203ENST00000494426 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
CLIC3-203ENST00000494426 UQCR11O14957 56 aa8.95□□□□□ -0.98
CLIC3-203ENST00000494426 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
CLIC3-203ENST00000494426 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
CLIC3-203ENST00000494426 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
CLIC3-203ENST00000494426 Q1T7F1 81 aa8.85□□□□□ -0.99
CLIC3-203ENST00000494426 V9GYY9 64 aa8.84□□□□□ -0.99
CLIC3-203ENST00000494426 PCP4P48539 62 aa8.82□□□□□ -1
CLIC3-203ENST00000494426 KRTAP19-7Q3SYF9 63 aa8.82□□□□□ -1
CLIC3-203ENST00000494426 PSPHP1O15172 72 aa8.8□□□□□ -1
CLIC3-203ENST00000494426 GPR98Q8WXG9 6306 aa8.79□□□□□ -1
CLIC3-203ENST00000494426 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
CLIC3-203ENST00000494426 SPRR2DP22532 72 aa8.75□□□□□ -1.01
CLIC3-203ENST00000494426 MT1EP04732 61 aa8.71□□□□□ -1.02
CLIC3-203ENST00000494426 TNP1P09430 55 aa8.7□□□□□ -1.02
CLIC3-203ENST00000494426 RPS28P62857 69 aaKnown RBP8.65□□□□□ -1.02
CLIC3-203ENST00000494426 KRTAP19-5Q3LI72 72 aa8.65□□□□□ -1.02
CLIC3-203ENST00000494426 LCE3AQ5TA76 89 aa8.61□□□□□ -1.03
CLIC3-203ENST00000494426 KRTAP19-3Q7Z4W3 81 aa8.56□□□□□ -1.04
CLIC3-203ENST00000494426 LCE5AQ5TCM9 118 aa8.55□□□□□ -1.04
CLIC3-203ENST00000494426 LCE3BQ5TA77 95 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms