RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PRKDCP78527 4128 aaKnown RBP1.93□□□□□ -2.1
SNX13-210ENST00000494402 TFF3Q07654 80 aa1.92□□□□□ -2.1
SNX13-210ENST00000494402 PKDREJQ9NTG1 2253 aa1.92□□□□□ -2.1
SNX13-210ENST00000494402 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
SNX13-210ENST00000494402 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
SNX13-210ENST00000494402 COL7A1Q02388 2944 aa1.91□□□□□ -2.1
SNX13-210ENST00000494402 STAB2Q8WWQ8 2551 aa1.91□□□□□ -2.1
SNX13-210ENST00000494402 ANK2Q01484 3957 aa1.9□□□□□ -2.11
SNX13-210ENST00000494402 RNF213Q63HN8 5207 aa1.9□□□□□ -2.11
SNX13-210ENST00000494402 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
SNX13-210ENST00000494402 NFAT5O94916 1531 aa1.88□□□□□ -2.11
SNX13-210ENST00000494402 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
SNX13-210ENST00000494402 DNAH1Q9P2D7 4330 aa1.84□□□□□ -2.11
SNX13-210ENST00000494402 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.11
SNX13-210ENST00000494402 SACSQ9NZJ4 4579 aa1.84□□□□□ -2.11
SNX13-210ENST00000494402 SPINK6Q6UWN8 80 aa1.84□□□□□ -2.11
SNX13-210ENST00000494402 AKAP6Q13023 2319 aa1.83□□□□□ -2.12
SNX13-210ENST00000494402 H3BUA1 57 aa1.83□□□□□ -2.12
SNX13-210ENST00000494402 KNL1Q8NG31 2342 aa1.82□□□□□ -2.12
SNX13-210ENST00000494402 SSPOA2VEC9 5147 aa1.82□□□□□ -2.12
SNX13-210ENST00000494402 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
SNX13-210ENST00000494402 NDUFA1O15239 70 aa1.81□□□□□ -2.12
SNX13-210ENST00000494402 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
SNX13-210ENST00000494402 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
SNX13-210ENST00000494402 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
SNX13-210ENST00000494402 SNRPGP62308 76 aaKnown RBP1.78□□□□□ -2.12
SNX13-210ENST00000494402 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.13
SNX13-210ENST00000494402 WFDC10BQ8IUB3 73 aa1.77□□□□□ -2.13
SNX13-210ENST00000494402 DEFB124Q8NES8 71 aa1.77□□□□□ -2.13
SNX13-210ENST00000494402 S4R3F8 94 aa1.77□□□□□ -2.13
SNX13-210ENST00000494402 SMR3AQ99954 134 aa1.75□□□□□ -2.13
SNX13-210ENST00000494402 KAAG1Q9UBP8 84 aa1.74□□□□□ -2.13
SNX13-210ENST00000494402 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
SNX13-210ENST00000494402 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
SNX13-210ENST00000494402 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SNX13-210ENST00000494402 DEFB106AQ8N104 65 aa1.72□□□□□ -2.13
SNX13-210ENST00000494402 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
SNX13-210ENST00000494402 SPINK1P00995 79 aa1.71□□□□□ -2.14
SNX13-210ENST00000494402 PRLHP81277 87 aa1.71□□□□□ -2.14
SNX13-210ENST00000494402 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
SNX13-210ENST00000494402 DUOX1Q9NRD9 1551 aa1.7□□□□□ -2.14
SNX13-210ENST00000494402 CSMD3Q7Z407 3707 aa1.68□□□□□ -2.14
SNX13-210ENST00000494402 GCC2Q8IWJ2 1684 aa1.68□□□□□ -2.14
SNX13-210ENST00000494402 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
SNX13-210ENST00000494402 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
SNX13-210ENST00000494402 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
SNX13-210ENST00000494402 KMT2DO14686 5537 aa1.64□□□□□ -2.15
SNX13-210ENST00000494402 IGLV5-48A0A075B6I7 105 aa1.64□□□□□ -2.15
SNX13-210ENST00000494402 DEFB131AP59861 70 aa1.64□□□□□ -2.15
SNX13-210ENST00000494402 H0YGG7 62 aa1.63□□□□□ -2.15
SNX13-210ENST00000494402 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SNX13-210ENST00000494402 DEFB135Q30KP9 77 aa1.62□□□□□ -2.15
SNX13-210ENST00000494402 HSPG2P98160 4391 aa1.62□□□□□ -2.15
SNX13-210ENST00000494402 LYSTQ99698 3801 aa1.62□□□□□ -2.15
SNX13-210ENST00000494402 DSTQ03001 7570 aaKnown RBP1.61□□□□□ -2.15
SNX13-210ENST00000494402 KRTAP2-3P0C7H8 128 aa1.61□□□□□ -2.15
SNX13-210ENST00000494402 KRTAP2-4Q9BYR9 128 aa1.61□□□□□ -2.15
SNX13-210ENST00000494402 KRTAP2-1Q9BYU5 128 aa1.61□□□□□ -2.15
SNX13-210ENST00000494402 NOP10Q9NPE3 64 aaKnown RBP1.61□□□□□ -2.15
SNX13-210ENST00000494402 U3KQA8 63 aa1.61□□□□□ -2.15
SNX13-210ENST00000494402 FAT3Q8TDW7 4589 aa1.61□□□□□ -2.15
SNX13-210ENST00000494402 ANK3Q12955 4377 aaKnown RBP1.61□□□□□ -2.15
SNX13-210ENST00000494402 M0R2T5 61 aa1.6□□□□□ -2.15
SNX13-210ENST00000494402 DYNC1H1Q14204 4646 aaKnown RBP1.6□□□□□ -2.15
SNX13-210ENST00000494402 DNAH9Q9NYC9 4486 aa1.59□□□□□ -2.16
SNX13-210ENST00000494402 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
SNX13-210ENST00000494402 MMP24-AS1A0A0U1RRL7 71 aa1.57□□□□□ -2.16
SNX13-210ENST00000494402 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
SNX13-210ENST00000494402 LRP2P98164 4655 aa1.55□□□□□ -2.16
SNX13-210ENST00000494402 FAT2Q9NYQ8 4349 aa1.55□□□□□ -2.16
SNX13-210ENST00000494402 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
SNX13-210ENST00000494402 HUWE1Q7Z6Z7 4374 aaKnown RBP1.52□□□□□ -2.17
SNX13-210ENST00000494402 FAT1Q14517 4588 aa1.52□□□□□ -2.17
SNX13-210ENST00000494402 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
SNX13-210ENST00000494402 USH2AO75445 5202 aa1.51□□□□□ -2.17
SNX13-210ENST00000494402 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
SNX13-210ENST00000494402 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
SNX13-210ENST00000494402 MUC12Q9UKN1 5478 aa1.49□□□□□ -2.17
SNX13-210ENST00000494402 PKD1P98161 4303 aa1.48□□□□□ -2.17
SNX13-210ENST00000494402 DNAH7Q8WXX0 4024 aa1.47□□□□□ -2.17
SNX13-210ENST00000494402 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
SNX13-210ENST00000494402 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
SNX13-210ENST00000494402 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
SNX13-210ENST00000494402 M0QY20 66 aa1.43□□□□□ -2.18
SNX13-210ENST00000494402 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
SNX13-210ENST00000494402 DNAH11Q96DT5 4516 aa1.42□□□□□ -2.18
SNX13-210ENST00000494402 PRM1P04553 51 aa1.41□□□□□ -2.18
SNX13-210ENST00000494402 POLR2KP53803 58 aaKnown RBP1.41□□□□□ -2.18
SNX13-210ENST00000494402 APOBP04114 4563 aaKnown RBP1.41□□□□□ -2.18
SNX13-210ENST00000494402 A8MTW9 85 aa1.4□□□□□ -2.19
SNX13-210ENST00000494402 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
SNX13-210ENST00000494402 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
SNX13-210ENST00000494402 TNXBP22105 4242 aa1.37□□□□□ -2.19
SNX13-210ENST00000494402 STARD9Q9P2P6 4700 aa1.37□□□□□ -2.19
SNX13-210ENST00000494402 RPL39P62891 51 aaKnown RBP1.36□□□□□ -2.19
SNX13-210ENST00000494402 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
SNX13-210ENST00000494402 DNAH6Q9C0G6 4158 aa1.35□□□□□ -2.19
SNX13-210ENST00000494402 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
SNX13-210ENST00000494402 C9orf92A6NGG3 77 aa1.33□□□□□ -2.2
SNX13-210ENST00000494402 CLPSL2Q6UWE3 100 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms