RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 Q8N9L7 120 aa3.87□□□□□ -1.79
RIF1-211ENST00000494333 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
RIF1-211ENST00000494333 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
RIF1-211ENST00000494333 USH2AO75445 5202 aa3.84□□□□□ -1.79
RIF1-211ENST00000494333 HCG22E2RYF7 251 aa3.84□□□□□ -1.79
RIF1-211ENST00000494333 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
RIF1-211ENST00000494333 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
RIF1-211ENST00000494333 UBL5Q9BZL1 73 aa3.83□□□□□ -1.8
RIF1-211ENST00000494333 LINC00846Q9NV44 126 aa3.83□□□□□ -1.8
RIF1-211ENST00000494333 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
RIF1-211ENST00000494333 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
RIF1-211ENST00000494333 K7EP34 96 aa3.81□□□□□ -1.8
RIF1-211ENST00000494333 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
RIF1-211ENST00000494333 C4orf26Q17RF5 130 aa3.8□□□□□ -1.8
RIF1-211ENST00000494333 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
RIF1-211ENST00000494333 F8W1H4 67 aa3.76□□□□□ -1.81
RIF1-211ENST00000494333 PCP4L1A6NKN8 68 aa3.75□□□□□ -1.81
RIF1-211ENST00000494333 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
RIF1-211ENST00000494333 ETDBQ3ZM63 59 aa3.75□□□□□ -1.81
RIF1-211ENST00000494333 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
RIF1-211ENST00000494333 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
RIF1-211ENST00000494333 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
RIF1-211ENST00000494333 C1orf64Q8NEQ6 169 aa3.72□□□□□ -1.81
RIF1-211ENST00000494333 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
RIF1-211ENST00000494333 S4R3F8 94 aa3.7□□□□□ -1.82
RIF1-211ENST00000494333 FAM236AA0A1B0GUQ0 79 aa3.69□□□□□ -1.82
RIF1-211ENST00000494333 FAM236BA0A1B0GV22 79 aa3.69□□□□□ -1.82
RIF1-211ENST00000494333 LCA10Q71F78 164 aa3.68□□□□□ -1.82
RIF1-211ENST00000494333 CYP4F30PQ9H0H9 118 aa3.67□□□□□ -1.82
RIF1-211ENST00000494333 ACYP1P07311 99 aa3.66□□□□□ -1.82
RIF1-211ENST00000494333 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
RIF1-211ENST00000494333 HIST1H4AP62805 103 aaKnown RBP3.63□□□□□ -1.83
RIF1-211ENST00000494333 A0A087WVE0 104 aa3.62□□□□□ -1.83
RIF1-211ENST00000494333 LOC101927531A0A1B0GV80 90 aa3.62□□□□□ -1.83
RIF1-211ENST00000494333 FAM240AA0A1B0GVK7 77 aa3.62□□□□□ -1.83
RIF1-211ENST00000494333 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
RIF1-211ENST00000494333 ATP5EP2Q5VTU8 51 aa3.61□□□□□ -1.83
RIF1-211ENST00000494333 Q5VV11 94 aa3.61□□□□□ -1.83
RIF1-211ENST00000494333 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
RIF1-211ENST00000494333 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
RIF1-211ENST00000494333 UQCRQO14949 82 aa3.6□□□□□ -1.83
RIF1-211ENST00000494333 MT1BP07438 61 aa3.6□□□□□ -1.83
RIF1-211ENST00000494333 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
RIF1-211ENST00000494333 A6NN06 94 aa3.59□□□□□ -1.83
RIF1-211ENST00000494333 H0Y9P7 68 aa3.59□□□□□ -1.83
RIF1-211ENST00000494333 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
RIF1-211ENST00000494333 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
RIF1-211ENST00000494333 ATOX1O00244 68 aa3.58□□□□□ -1.84
RIF1-211ENST00000494333 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
RIF1-211ENST00000494333 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
RIF1-211ENST00000494333 NDUFC1O43677 76 aa3.56□□□□□ -1.84
RIF1-211ENST00000494333 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
RIF1-211ENST00000494333 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
RIF1-211ENST00000494333 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
RIF1-211ENST00000494333 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
RIF1-211ENST00000494333 CRIPTQ9P021 101 aa3.55□□□□□ -1.84
RIF1-211ENST00000494333 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
RIF1-211ENST00000494333 A0A1B0GV90 55 aa3.52□□□□□ -1.85
RIF1-211ENST00000494333 A8MUN3 132 aa3.52□□□□□ -1.85
RIF1-211ENST00000494333 H0YAA0 97 aa3.51□□□□□ -1.85
RIF1-211ENST00000494333 MP68P56378 58 aa3.51□□□□□ -1.85
RIF1-211ENST00000494333 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
RIF1-211ENST00000494333 J3QR89 54 aa3.46□□□□□ -1.86
RIF1-211ENST00000494333 SCGB1A1P11684 91 aa3.46□□□□□ -1.86
RIF1-211ENST00000494333 H3BPC8 53 aa3.44□□□□□ -1.86
RIF1-211ENST00000494333 P0C880 135 aa3.41□□□□□ -1.86
RIF1-211ENST00000494333 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
RIF1-211ENST00000494333 DMAC1Q96GE9 116 aa3.41□□□□□ -1.86
RIF1-211ENST00000494333 R4GN34 69 aa3.41□□□□□ -1.86
RIF1-211ENST00000494333 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
RIF1-211ENST00000494333 C20orf197Q8N268 126 aa3.39□□□□□ -1.87
RIF1-211ENST00000494333 M0QZ58 72 aa3.38□□□□□ -1.87
RIF1-211ENST00000494333 MT1XP80297 61 aa3.37□□□□□ -1.87
RIF1-211ENST00000494333 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
RIF1-211ENST00000494333 ACYP2P14621 99 aa3.35□□□□□ -1.87
RIF1-211ENST00000494333 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
RIF1-211ENST00000494333 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
RIF1-211ENST00000494333 TRAV7A0A075B6U4 112 aa3.34□□□□□ -1.87
RIF1-211ENST00000494333 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
RIF1-211ENST00000494333 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
RIF1-211ENST00000494333 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
RIF1-211ENST00000494333 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
RIF1-211ENST00000494333 NEBP20929 6669 aa3.31□□□□□ -1.88
RIF1-211ENST00000494333 K7ERU9 68 aa3.31□□□□□ -1.88
RIF1-211ENST00000494333 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
RIF1-211ENST00000494333 KMT2DO14686 5537 aa3.31□□□□□ -1.88
RIF1-211ENST00000494333 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
RIF1-211ENST00000494333 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
RIF1-211ENST00000494333 SPTSSBQ8NFR3 76 aa3.3□□□□□ -1.88
RIF1-211ENST00000494333 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
RIF1-211ENST00000494333 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
RIF1-211ENST00000494333 SNURFQ9Y675 71 aa3.28□□□□□ -1.88
RIF1-211ENST00000494333 SPRR2EP22531 72 aa3.27□□□□□ -1.89
RIF1-211ENST00000494333 SPRR2BP35325 72 aa3.27□□□□□ -1.89
RIF1-211ENST00000494333 SPRR2AP35326 72 aa3.27□□□□□ -1.89
RIF1-211ENST00000494333 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
RIF1-211ENST00000494333 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
RIF1-211ENST00000494333 CAMK2N1Q7Z7J9 78 aa3.24□□□□□ -1.89
RIF1-211ENST00000494333 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
RIF1-211ENST00000494333 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms