RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 A8MUU9 505 aa6.6□□□□□ -1.35
PHF3-205ENST00000494284 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
PHF3-205ENST00000494284 LRP2P98164 4655 aa6.6□□□□□ -1.35
PHF3-205ENST00000494284 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
PHF3-205ENST00000494284 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
PHF3-205ENST00000494284 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
PHF3-205ENST00000494284 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
PHF3-205ENST00000494284 H0YAA0 97 aa6.49□□□□□ -1.37
PHF3-205ENST00000494284 XP32Q5T750 250 aa6.46□□□□□ -1.38
PHF3-205ENST00000494284 A0A1B0GU33 70 aa6.44□□□□□ -1.38
PHF3-205ENST00000494284 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
PHF3-205ENST00000494284 CSAG1Q6PB30 78 aa6.4□□□□□ -1.38
PHF3-205ENST00000494284 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
PHF3-205ENST00000494284 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
PHF3-205ENST00000494284 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
PHF3-205ENST00000494284 A0A0D9SG42 100 aa6.36□□□□□ -1.39
PHF3-205ENST00000494284 MUC2Q02817 5179 aa6.36□□□□□ -1.39
PHF3-205ENST00000494284 HERC2O95714 4834 aa6.32□□□□□ -1.4
PHF3-205ENST00000494284 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
PHF3-205ENST00000494284 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
PHF3-205ENST00000494284 S4R3F8 94 aa6.26□□□□□ -1.41
PHF3-205ENST00000494284 P0C880 135 aa6.25□□□□□ -1.41
PHF3-205ENST00000494284 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
PHF3-205ENST00000494284 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
PHF3-205ENST00000494284 TPRXLQ17RH7 258 aa6.21□□□□□ -1.41
PHF3-205ENST00000494284 HERC1Q15751 4861 aa6.2□□□□□ -1.42
PHF3-205ENST00000494284 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
PHF3-205ENST00000494284 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
PHF3-205ENST00000494284 K7ERS5 55 aa6.16□□□□□ -1.42
PHF3-205ENST00000494284 J3QL48 77 aa6.15□□□□□ -1.42
PHF3-205ENST00000494284 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
PHF3-205ENST00000494284 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
PHF3-205ENST00000494284 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
PHF3-205ENST00000494284 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
PHF3-205ENST00000494284 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
PHF3-205ENST00000494284 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
PHF3-205ENST00000494284 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
PHF3-205ENST00000494284 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
PHF3-205ENST00000494284 ROMO1P60602 79 aa6.03□□□□□ -1.44
PHF3-205ENST00000494284 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
PHF3-205ENST00000494284 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
PHF3-205ENST00000494284 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
PHF3-205ENST00000494284 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
PHF3-205ENST00000494284 M0QZ58 72 aa5.93□□□□□ -1.46
PHF3-205ENST00000494284 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
PHF3-205ENST00000494284 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
PHF3-205ENST00000494284 R4GN34 69 aa5.88□□□□□ -1.47
PHF3-205ENST00000494284 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
PHF3-205ENST00000494284 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
PHF3-205ENST00000494284 H3BS24 57 aa5.74□□□□□ -1.49
PHF3-205ENST00000494284 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
PHF3-205ENST00000494284 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
PHF3-205ENST00000494284 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
PHF3-205ENST00000494284 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
PHF3-205ENST00000494284 M0R2T5 61 aa5.52□□□□□ -1.53
PHF3-205ENST00000494284 MT1HP80294 61 aa5.46□□□□□ -1.53
PHF3-205ENST00000494284 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
PHF3-205ENST00000494284 MT1FP04733 61 aa5.37□□□□□ -1.55
PHF3-205ENST00000494284 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
PHF3-205ENST00000494284 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
PHF3-205ENST00000494284 MT2AP02795 61 aa5.34□□□□□ -1.56
PHF3-205ENST00000494284 USH2AO75445 5202 aa5.33□□□□□ -1.56
PHF3-205ENST00000494284 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
PHF3-205ENST00000494284 TNP1P09430 55 aa5.27□□□□□ -1.57
PHF3-205ENST00000494284 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
PHF3-205ENST00000494284 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
PHF3-205ENST00000494284 KMT2DO14686 5537 aa5.13□□□□□ -1.59
PHF3-205ENST00000494284 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
PHF3-205ENST00000494284 MT1BP07438 61 aa5.11□□□□□ -1.59
PHF3-205ENST00000494284 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
PHF3-205ENST00000494284 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
PHF3-205ENST00000494284 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
PHF3-205ENST00000494284 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
PHF3-205ENST00000494284 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
PHF3-205ENST00000494284 MT1XP80297 61 aa5.04□□□□□ -1.6
PHF3-205ENST00000494284 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
PHF3-205ENST00000494284 LCE2BO14633 110 aa4.99□□□□□ -1.61
PHF3-205ENST00000494284 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
PHF3-205ENST00000494284 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.62
PHF3-205ENST00000494284 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
PHF3-205ENST00000494284 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
PHF3-205ENST00000494284 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
PHF3-205ENST00000494284 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
PHF3-205ENST00000494284 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
PHF3-205ENST00000494284 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
PHF3-205ENST00000494284 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
PHF3-205ENST00000494284 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
PHF3-205ENST00000494284 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
PHF3-205ENST00000494284 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
PHF3-205ENST00000494284 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
PHF3-205ENST00000494284 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
PHF3-205ENST00000494284 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
PHF3-205ENST00000494284 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
PHF3-205ENST00000494284 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
PHF3-205ENST00000494284 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
PHF3-205ENST00000494284 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
PHF3-205ENST00000494284 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
PHF3-205ENST00000494284 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
PHF3-205ENST00000494284 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
PHF3-205ENST00000494284 MT1EP04732 61 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms