RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MT2AP02795 61 aa8.55□□□□□ -1.04
PDLIM7-208ENST00000493815 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
PDLIM7-208ENST00000493815 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
PDLIM7-208ENST00000493815 KRTAP9-2Q9BYQ4 174 aa8.53□□□□□ -1.04
PDLIM7-208ENST00000493815 V9GYY9 64 aa8.53□□□□□ -1.04
PDLIM7-208ENST00000493815 MT1FP04733 61 aa8.49□□□□□ -1.05
PDLIM7-208ENST00000493815 C20orf197Q8N268 126 aa8.49□□□□□ -1.05
PDLIM7-208ENST00000493815 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
PDLIM7-208ENST00000493815 A8MUN3 132 aa8.46□□□□□ -1.05
PDLIM7-208ENST00000493815 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.05
PDLIM7-208ENST00000493815 KRTAP10-10P60014 251 aa8.46□□□□□ -1.06
PDLIM7-208ENST00000493815 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
PDLIM7-208ENST00000493815 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
PDLIM7-208ENST00000493815 NDUFC1O43677 76 aa8.37□□□□□ -1.07
PDLIM7-208ENST00000493815 SERP1Q9Y6X1 66 aa8.37□□□□□ -1.07
PDLIM7-208ENST00000493815 FSIP2Q5CZC0 6907 aa8.33□□□□□ -1.08
PDLIM7-208ENST00000493815 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
PDLIM7-208ENST00000493815 SMIM26A0A096LP01 95 aa8.32□□□□□ -1.08
PDLIM7-208ENST00000493815 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
PDLIM7-208ENST00000493815 ACYP2P14621 99 aa8.27□□□□□ -1.08
PDLIM7-208ENST00000493815 SPANXA2-OT1Q8N9U9 137 aa8.26□□□□□ -1.09
PDLIM7-208ENST00000493815 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
PDLIM7-208ENST00000493815 LCE2BO14633 110 aa8.23□□□□□ -1.09
PDLIM7-208ENST00000493815 USH2AO75445 5202 aa8.2□□□□□ -1.1
PDLIM7-208ENST00000493815 H7BZZ5 65 aa8.19□□□□□ -1.1
PDLIM7-208ENST00000493815 PMAIP1Q13794 54 aa8.16□□□□□ -1.1
PDLIM7-208ENST00000493815 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
PDLIM7-208ENST00000493815 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
PDLIM7-208ENST00000493815 H0YAA0 97 aa8.13□□□□□ -1.11
PDLIM7-208ENST00000493815 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
PDLIM7-208ENST00000493815 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
PDLIM7-208ENST00000493815 BRK1Q8WUW1 75 aa8.09□□□□□ -1.11
PDLIM7-208ENST00000493815 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
PDLIM7-208ENST00000493815 COA5Q86WW8 74 aa8.06□□□□□ -1.12
PDLIM7-208ENST00000493815 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
PDLIM7-208ENST00000493815 P0C880 135 aa8.04□□□□□ -1.12
PDLIM7-208ENST00000493815 SSPOA2VEC9 5147 aa8.03□□□□□ -1.12
PDLIM7-208ENST00000493815 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
PDLIM7-208ENST00000493815 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
PDLIM7-208ENST00000493815 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
PDLIM7-208ENST00000493815 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
PDLIM7-208ENST00000493815 MT1BP07438 61 aa7.89□□□□□ -1.15
PDLIM7-208ENST00000493815 Q1T7F1 81 aa7.89□□□□□ -1.15
PDLIM7-208ENST00000493815 Q5VV11 94 aa7.88□□□□□ -1.15
PDLIM7-208ENST00000493815 R4GN34 69 aa7.88□□□□□ -1.15
PDLIM7-208ENST00000493815 M0QZ58 72 aa7.86□□□□□ -1.15
PDLIM7-208ENST00000493815 KTN1-AS1Q86SY8 53 aa7.83□□□□□ -1.16
PDLIM7-208ENST00000493815 KRTAP19-6Q3LI70 58 aa7.82□□□□□ -1.16
PDLIM7-208ENST00000493815 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
PDLIM7-208ENST00000493815 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
PDLIM7-208ENST00000493815 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
PDLIM7-208ENST00000493815 A6NN06 94 aa7.63□□□□□ -1.19
PDLIM7-208ENST00000493815 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PDLIM7-208ENST00000493815 A0A1B0GU69 56 aa7.63□□□□□ -1.19
PDLIM7-208ENST00000493815 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
PDLIM7-208ENST00000493815 A0A1B0GU33 70 aa7.58□□□□□ -1.2
PDLIM7-208ENST00000493815 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
PDLIM7-208ENST00000493815 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
PDLIM7-208ENST00000493815 H3BS24 57 aa7.54□□□□□ -1.2
PDLIM7-208ENST00000493815 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
PDLIM7-208ENST00000493815 PSPHP1O15172 72 aa7.51□□□□□ -1.21
PDLIM7-208ENST00000493815 MT1XP80297 61 aa7.51□□□□□ -1.21
PDLIM7-208ENST00000493815 A0A0D9SG42 100 aa7.5□□□□□ -1.21
PDLIM7-208ENST00000493815 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
PDLIM7-208ENST00000493815 PRR15LQ9BU68 103 aa7.47□□□□□ -1.21
PDLIM7-208ENST00000493815 CDC42SE1Q9NRR8 79 aa7.47□□□□□ -1.21
PDLIM7-208ENST00000493815 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
PDLIM7-208ENST00000493815 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
PDLIM7-208ENST00000493815 A8MU10 97 aa7.38□□□□□ -1.23
PDLIM7-208ENST00000493815 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
PDLIM7-208ENST00000493815 A6NED7 52 aa7.32□□□□□ -1.24
PDLIM7-208ENST00000493815 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
PDLIM7-208ENST00000493815 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
PDLIM7-208ENST00000493815 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
PDLIM7-208ENST00000493815 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
PDLIM7-208ENST00000493815 UQCR11O14957 56 aa7.26□□□□□ -1.25
PDLIM7-208ENST00000493815 KMT2DO14686 5537 aa7.23□□□□□ -1.25
PDLIM7-208ENST00000493815 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
PDLIM7-208ENST00000493815 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
PDLIM7-208ENST00000493815 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
PDLIM7-208ENST00000493815 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
PDLIM7-208ENST00000493815 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
PDLIM7-208ENST00000493815 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
PDLIM7-208ENST00000493815 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
PDLIM7-208ENST00000493815 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
PDLIM7-208ENST00000493815 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
PDLIM7-208ENST00000493815 MUC12Q9UKN1 5478 aa6.98□□□□□ -1.29
PDLIM7-208ENST00000493815 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
PDLIM7-208ENST00000493815 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
PDLIM7-208ENST00000493815 K7ERS5 55 aa6.89□□□□□ -1.31
PDLIM7-208ENST00000493815 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
PDLIM7-208ENST00000493815 TNP1P09430 55 aa6.83□□□□□ -1.32
PDLIM7-208ENST00000493815 NEBP20929 6669 aa6.83□□□□□ -1.32
PDLIM7-208ENST00000493815 ROMO1P60602 79 aa6.82□□□□□ -1.32
PDLIM7-208ENST00000493815 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
PDLIM7-208ENST00000493815 SPRR2EP22531 72 aa6.73□□□□□ -1.33
PDLIM7-208ENST00000493815 SPRR2BP35325 72 aa6.73□□□□□ -1.33
PDLIM7-208ENST00000493815 SPRR2AP35326 72 aa6.73□□□□□ -1.33
PDLIM7-208ENST00000493815 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
PDLIM7-208ENST00000493815 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms