RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
NECTIN3-211ENST00000493615 LCA10Q71F78 164 aa9.28□□□□□ -0.92
NECTIN3-211ENST00000493615 S4R3F8 94 aa9.27□□□□□ -0.93
NECTIN3-211ENST00000493615 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
NECTIN3-211ENST00000493615 FLGP20930 4061 aaPredicted RBP9.25□□□□□ -0.93
NECTIN3-211ENST00000493615 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
NECTIN3-211ENST00000493615 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
NECTIN3-211ENST00000493615 MT1HP80294 61 aa9.13□□□□□ -0.95
NECTIN3-211ENST00000493615 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
NECTIN3-211ENST00000493615 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
NECTIN3-211ENST00000493615 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
NECTIN3-211ENST00000493615 M0R2T5 61 aa9.04□□□□□ -0.96
NECTIN3-211ENST00000493615 Q1T7F1 81 aa9□□□□□ -0.97
NECTIN3-211ENST00000493615 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
NECTIN3-211ENST00000493615 V9GYY9 64 aa8.91□□□□□ -0.98
NECTIN3-211ENST00000493615 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
NECTIN3-211ENST00000493615 A0A1B0GU69 56 aa8.89□□□□□ -0.99
NECTIN3-211ENST00000493615 PSPHP1O15172 72 aa8.89□□□□□ -0.99
NECTIN3-211ENST00000493615 PRR15LQ9BU68 103 aa8.89□□□□□ -0.99
NECTIN3-211ENST00000493615 KRTAP10-6P60371 365 aaPredicted RBP8.88□□□□□ -0.99
NECTIN3-211ENST00000493615 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
NECTIN3-211ENST00000493615 H0YAA0 97 aa8.85□□□□□ -0.99
NECTIN3-211ENST00000493615 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
NECTIN3-211ENST00000493615 SEC61GP60059 68 aa8.84□□□□□ -0.99
NECTIN3-211ENST00000493615 P0C880 135 aa8.83□□□□□ -1
NECTIN3-211ENST00000493615 Q5VV11 94 aa8.8□□□□□ -1
NECTIN3-211ENST00000493615 KRTAP9-8Q9BYQ0 159 aa8.74□□□□□ -1.01
NECTIN3-211ENST00000493615 MT2AP02795 61 aa8.7□□□□□ -1.02
NECTIN3-211ENST00000493615 A0A1B0GU33 70 aa8.68□□□□□ -1.02
NECTIN3-211ENST00000493615 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
NECTIN3-211ENST00000493615 MT1FP04733 61 aa8.65□□□□□ -1.02
NECTIN3-211ENST00000493615 PRO0628Q9UI54 55 aa8.62□□□□□ -1.03
NECTIN3-211ENST00000493615 KRTAP13-4Q3LI77 160 aa8.62□□□□□ -1.03
NECTIN3-211ENST00000493615 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
NECTIN3-211ENST00000493615 SPATA8Q6RVD6 105 aa8.6□□□□□ -1.03
NECTIN3-211ENST00000493615 A6NED7 52 aa8.57□□□□□ -1.04
NECTIN3-211ENST00000493615 UQCR11O14957 56 aa8.57□□□□□ -1.04
NECTIN3-211ENST00000493615 R4GN34 69 aa8.53□□□□□ -1.04
NECTIN3-211ENST00000493615 M0QZ58 72 aa8.53□□□□□ -1.04
NECTIN3-211ENST00000493615 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
NECTIN3-211ENST00000493615 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
NECTIN3-211ENST00000493615 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
NECTIN3-211ENST00000493615 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
NECTIN3-211ENST00000493615 A8MU10 97 aa8.47□□□□□ -1.05
NECTIN3-211ENST00000493615 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
NECTIN3-211ENST00000493615 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
NECTIN3-211ENST00000493615 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
NECTIN3-211ENST00000493615 A0A0D9SG42 100 aa8.42□□□□□ -1.06
NECTIN3-211ENST00000493615 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
NECTIN3-211ENST00000493615 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
NECTIN3-211ENST00000493615 LCE2BO14633 110 aa8.3□□□□□ -1.08
NECTIN3-211ENST00000493615 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
NECTIN3-211ENST00000493615 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
NECTIN3-211ENST00000493615 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
NECTIN3-211ENST00000493615 KRTAP19-8Q3LI54 63 aa8.21□□□□□ -1.09
NECTIN3-211ENST00000493615 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
NECTIN3-211ENST00000493615 A6NN06 94 aa8.19□□□□□ -1.1
NECTIN3-211ENST00000493615 PMAIP1Q13794 54 aa8.19□□□□□ -1.1
NECTIN3-211ENST00000493615 USH2AO75445 5202 aa8.18□□□□□ -1.1
NECTIN3-211ENST00000493615 MT1BP07438 61 aa8.15□□□□□ -1.1
NECTIN3-211ENST00000493615 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
NECTIN3-211ENST00000493615 K7ERS5 55 aa8.06□□□□□ -1.12
NECTIN3-211ENST00000493615 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
NECTIN3-211ENST00000493615 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
NECTIN3-211ENST00000493615 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
NECTIN3-211ENST00000493615 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
NECTIN3-211ENST00000493615 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
NECTIN3-211ENST00000493615 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
NECTIN3-211ENST00000493615 MT1XP80297 61 aa7.85□□□□□ -1.15
NECTIN3-211ENST00000493615 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
NECTIN3-211ENST00000493615 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
NECTIN3-211ENST00000493615 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
NECTIN3-211ENST00000493615 ROMO1P60602 79 aa7.77□□□□□ -1.17
NECTIN3-211ENST00000493615 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
NECTIN3-211ENST00000493615 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
NECTIN3-211ENST00000493615 TNP1P09430 55 aa7.55□□□□□ -1.2
NECTIN3-211ENST00000493615 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
NECTIN3-211ENST00000493615 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
NECTIN3-211ENST00000493615 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
NECTIN3-211ENST00000493615 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
NECTIN3-211ENST00000493615 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.23
NECTIN3-211ENST00000493615 KMT2DO14686 5537 aa7.36□□□□□ -1.23
NECTIN3-211ENST00000493615 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
NECTIN3-211ENST00000493615 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
NECTIN3-211ENST00000493615 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
NECTIN3-211ENST00000493615 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
NECTIN3-211ENST00000493615 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
NECTIN3-211ENST00000493615 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
NECTIN3-211ENST00000493615 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
NECTIN3-211ENST00000493615 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
NECTIN3-211ENST00000493615 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
NECTIN3-211ENST00000493615 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
NECTIN3-211ENST00000493615 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
NECTIN3-211ENST00000493615 KRTAP19-7Q3SYF9 63 aa7.02□□□□□ -1.29
NECTIN3-211ENST00000493615 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
NECTIN3-211ENST00000493615 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
NECTIN3-211ENST00000493615 MUC12Q9UKN1 5478 aa6.92□□□□□ -1.3
NECTIN3-211ENST00000493615 MT1EP04732 61 aa6.89□□□□□ -1.31
NECTIN3-211ENST00000493615 KRTAP15-1Q3LI76 137 aa6.83□□□□□ -1.32
NECTIN3-211ENST00000493615 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms