RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 GTF2H5Q6ZYL4 71 aa5.01□□□□□ -1.61
COL6A3-214ENST00000493608 ETDBQ3ZM63 59 aa5□□□□□ -1.61
COL6A3-214ENST00000493608 F8W1H4 67 aa4.99□□□□□ -1.61
COL6A3-214ENST00000493608 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
COL6A3-214ENST00000493608 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
COL6A3-214ENST00000493608 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
COL6A3-214ENST00000493608 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
COL6A3-214ENST00000493608 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
COL6A3-214ENST00000493608 S4R3F8 94 aa4.91□□□□□ -1.62
COL6A3-214ENST00000493608 FAM236AA0A1B0GUQ0 79 aa4.89□□□□□ -1.63
COL6A3-214ENST00000493608 FAM236BA0A1B0GV22 79 aa4.89□□□□□ -1.63
COL6A3-214ENST00000493608 LCA10Q71F78 164 aa4.89□□□□□ -1.63
COL6A3-214ENST00000493608 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
COL6A3-214ENST00000493608 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
COL6A3-214ENST00000493608 MT3P25713 68 aa4.85□□□□□ -1.63
COL6A3-214ENST00000493608 HIST1H4AP62805 103 aaKnown RBP4.84□□□□□ -1.63
COL6A3-214ENST00000493608 A0A087WVE0 104 aa4.83□□□□□ -1.64
COL6A3-214ENST00000493608 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
COL6A3-214ENST00000493608 ACYP1P07311 99 aa4.83□□□□□ -1.64
COL6A3-214ENST00000493608 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
COL6A3-214ENST00000493608 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
COL6A3-214ENST00000493608 ATP5EP2Q5VTU8 51 aa4.79□□□□□ -1.64
COL6A3-214ENST00000493608 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
COL6A3-214ENST00000493608 H0Y9P7 68 aa4.78□□□□□ -1.64
COL6A3-214ENST00000493608 MT1BP07438 61 aa4.78□□□□□ -1.64
COL6A3-214ENST00000493608 UQCRQO14949 82 aa4.77□□□□□ -1.65
COL6A3-214ENST00000493608 Q5VV11 94 aa4.77□□□□□ -1.65
COL6A3-214ENST00000493608 KLKP1Q107X0 134 aa4.76□□□□□ -1.65
COL6A3-214ENST00000493608 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
COL6A3-214ENST00000493608 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
COL6A3-214ENST00000493608 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
COL6A3-214ENST00000493608 LINC00643Q86TS7 51 aa4.74□□□□□ -1.65
COL6A3-214ENST00000493608 A0A1B0GV90 55 aa4.73□□□□□ -1.65
COL6A3-214ENST00000493608 A6NN06 94 aa4.73□□□□□ -1.65
COL6A3-214ENST00000493608 ATOX1O00244 68 aa4.73□□□□□ -1.65
COL6A3-214ENST00000493608 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
COL6A3-214ENST00000493608 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
COL6A3-214ENST00000493608 NDUFC1O43677 76 aa4.69□□□□□ -1.66
COL6A3-214ENST00000493608 IMUPQ9GZP8 106 aa4.68□□□□□ -1.66
COL6A3-214ENST00000493608 OCR1Q9BZK8 76 aa4.67□□□□□ -1.66
COL6A3-214ENST00000493608 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
COL6A3-214ENST00000493608 PCP4P48539 62 aa4.65□□□□□ -1.67
COL6A3-214ENST00000493608 MP68P56378 58 aa4.65□□□□□ -1.67
COL6A3-214ENST00000493608 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
COL6A3-214ENST00000493608 A8MUN3 132 aa4.64□□□□□ -1.67
COL6A3-214ENST00000493608 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
COL6A3-214ENST00000493608 H0YAA0 97 aa4.62□□□□□ -1.67
COL6A3-214ENST00000493608 J3QR89 54 aa4.58□□□□□ -1.68
COL6A3-214ENST00000493608 SCGB1A1P11684 91 aa4.58□□□□□ -1.68
COL6A3-214ENST00000493608 H3BPC8 53 aa4.55□□□□□ -1.68
COL6A3-214ENST00000493608 P0C880 135 aa4.54□□□□□ -1.68
COL6A3-214ENST00000493608 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
COL6A3-214ENST00000493608 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
COL6A3-214ENST00000493608 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
COL6A3-214ENST00000493608 R4GN34 69 aa4.5□□□□□ -1.69
COL6A3-214ENST00000493608 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
COL6A3-214ENST00000493608 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
COL6A3-214ENST00000493608 M0QZ58 72 aa4.48□□□□□ -1.69
COL6A3-214ENST00000493608 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
COL6A3-214ENST00000493608 MT1XP80297 61 aa4.47□□□□□ -1.69
COL6A3-214ENST00000493608 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
COL6A3-214ENST00000493608 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
COL6A3-214ENST00000493608 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
COL6A3-214ENST00000493608 C20orf197Q8N268 126 aa4.45□□□□□ -1.7
COL6A3-214ENST00000493608 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
COL6A3-214ENST00000493608 KMT2DO14686 5537 aa4.45□□□□□ -1.7
COL6A3-214ENST00000493608 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
COL6A3-214ENST00000493608 ACYP2P14621 99 aa4.43□□□□□ -1.7
COL6A3-214ENST00000493608 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
COL6A3-214ENST00000493608 NEBP20929 6669 aa4.42□□□□□ -1.7
COL6A3-214ENST00000493608 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
COL6A3-214ENST00000493608 K7ERU9 68 aa4.41□□□□□ -1.7
COL6A3-214ENST00000493608 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
COL6A3-214ENST00000493608 SNURFQ9Y675 71 aa4.39□□□□□ -1.71
COL6A3-214ENST00000493608 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
COL6A3-214ENST00000493608 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
COL6A3-214ENST00000493608 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
COL6A3-214ENST00000493608 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
COL6A3-214ENST00000493608 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
COL6A3-214ENST00000493608 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
COL6A3-214ENST00000493608 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
COL6A3-214ENST00000493608 SPRR2EP22531 72 aa4.32□□□□□ -1.72
COL6A3-214ENST00000493608 SPRR2BP35325 72 aa4.32□□□□□ -1.72
COL6A3-214ENST00000493608 SPRR2AP35326 72 aa4.32□□□□□ -1.72
COL6A3-214ENST00000493608 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
COL6A3-214ENST00000493608 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
COL6A3-214ENST00000493608 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
COL6A3-214ENST00000493608 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
COL6A3-214ENST00000493608 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
COL6A3-214ENST00000493608 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
COL6A3-214ENST00000493608 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
COL6A3-214ENST00000493608 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
COL6A3-214ENST00000493608 COA5Q86WW8 74 aa4.18□□□□□ -1.74
COL6A3-214ENST00000493608 SPRR2DP22532 72 aa4.17□□□□□ -1.74
COL6A3-214ENST00000493608 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
COL6A3-214ENST00000493608 A0A0D9SG42 100 aa4.13□□□□□ -1.75
COL6A3-214ENST00000493608 COX7CP15954 63 aa4.13□□□□□ -1.75
COL6A3-214ENST00000493608 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
COL6A3-214ENST00000493608 SEC61GP60059 68 aa4.11□□□□□ -1.75
COL6A3-214ENST00000493608 CYSTM1Q9H1C7 97 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms