RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
CCDC6-202ENST00000491922 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
CCDC6-202ENST00000491922 RYR1P21817 5038 aa3.46□□□□□ -1.86
CCDC6-202ENST00000491922 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
CCDC6-202ENST00000491922 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
CCDC6-202ENST00000491922 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
CCDC6-202ENST00000491922 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
CCDC6-202ENST00000491922 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
CCDC6-202ENST00000491922 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.86
CCDC6-202ENST00000491922 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
CCDC6-202ENST00000491922 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
CCDC6-202ENST00000491922 DNAH2Q9P225 4427 aa3.39□□□□□ -1.87
CCDC6-202ENST00000491922 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
CCDC6-202ENST00000491922 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
CCDC6-202ENST00000491922 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
CCDC6-202ENST00000491922 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
CCDC6-202ENST00000491922 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CCDC6-202ENST00000491922 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
CCDC6-202ENST00000491922 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
CCDC6-202ENST00000491922 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
CCDC6-202ENST00000491922 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
CCDC6-202ENST00000491922 DNAH11Q96DT5 4516 aa3.36□□□□□ -1.87
CCDC6-202ENST00000491922 STARD9Q9P2P6 4700 aa3.35□□□□□ -1.87
CCDC6-202ENST00000491922 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
CCDC6-202ENST00000491922 S4R3F8 94 aa3.33□□□□□ -1.88
CCDC6-202ENST00000491922 KRTAP19-1Q8IUB9 90 aa3.32□□□□□ -1.88
CCDC6-202ENST00000491922 DNAH5Q8TE73 4624 aa3.32□□□□□ -1.88
CCDC6-202ENST00000491922 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
CCDC6-202ENST00000491922 ABCA13Q86UQ4 5058 aa3.29□□□□□ -1.88
CCDC6-202ENST00000491922 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
CCDC6-202ENST00000491922 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
CCDC6-202ENST00000491922 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
CCDC6-202ENST00000491922 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
CCDC6-202ENST00000491922 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CCDC6-202ENST00000491922 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
CCDC6-202ENST00000491922 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
CCDC6-202ENST00000491922 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
CCDC6-202ENST00000491922 PKD1P98161 4303 aa3.25□□□□□ -1.89
CCDC6-202ENST00000491922 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
CCDC6-202ENST00000491922 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
CCDC6-202ENST00000491922 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
CCDC6-202ENST00000491922 DYNC1H1Q14204 4646 aaKnown RBP3.2□□□□□ -1.9
CCDC6-202ENST00000491922 HERC1Q15751 4861 aa3.2□□□□□ -1.9
CCDC6-202ENST00000491922 M0QZ58 72 aa3.2□□□□□ -1.9
CCDC6-202ENST00000491922 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
CCDC6-202ENST00000491922 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
CCDC6-202ENST00000491922 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
CCDC6-202ENST00000491922 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
CCDC6-202ENST00000491922 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CCDC6-202ENST00000491922 KRTAP10-8P60410 259 aa3.16□□□□□ -1.9
CCDC6-202ENST00000491922 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
CCDC6-202ENST00000491922 PKHD1P08F94 4074 aa3.15□□□□□ -1.91
CCDC6-202ENST00000491922 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
CCDC6-202ENST00000491922 HSPG2P98160 4391 aa3.14□□□□□ -1.91
CCDC6-202ENST00000491922 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
CCDC6-202ENST00000491922 SMR3BP02814 79 aaPredicted RBP3.13□□□□□ -1.91
CCDC6-202ENST00000491922 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
CCDC6-202ENST00000491922 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CCDC6-202ENST00000491922 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
CCDC6-202ENST00000491922 LRP1Q07954 4544 aaKnown RBP3.08□□□□□ -1.92
CCDC6-202ENST00000491922 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
CCDC6-202ENST00000491922 TNXBP22105 4242 aa3.06□□□□□ -1.92
CCDC6-202ENST00000491922 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
CCDC6-202ENST00000491922 R4GN34 69 aa3.04□□□□□ -1.92
CCDC6-202ENST00000491922 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
CCDC6-202ENST00000491922 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
CCDC6-202ENST00000491922 PRO2289Q9P1D8 64 aa3.01□□□□□ -1.93
CCDC6-202ENST00000491922 FAT1Q14517 4588 aa3.01□□□□□ -1.93
CCDC6-202ENST00000491922 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CCDC6-202ENST00000491922 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
CCDC6-202ENST00000491922 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
CCDC6-202ENST00000491922 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
CCDC6-202ENST00000491922 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
CCDC6-202ENST00000491922 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
CCDC6-202ENST00000491922 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
CCDC6-202ENST00000491922 Q5VSD8 79 aa2.92□□□□□ -1.94
CCDC6-202ENST00000491922 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.95
CCDC6-202ENST00000491922 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
CCDC6-202ENST00000491922 TNP1P09430 55 aa2.86□□□□□ -1.95
CCDC6-202ENST00000491922 INE1O15225 51 aa2.85□□□□□ -1.95
CCDC6-202ENST00000491922 LPAP08519 4548 aa2.84□□□□□ -1.96
CCDC6-202ENST00000491922 MT1HL1P0DM35 61 aa2.83□□□□□ -1.96
CCDC6-202ENST00000491922 MUC2Q02817 5179 aa2.83□□□□□ -1.96
CCDC6-202ENST00000491922 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
CCDC6-202ENST00000491922 LRP2P98164 4655 aa2.8□□□□□ -1.96
CCDC6-202ENST00000491922 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
CCDC6-202ENST00000491922 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
CCDC6-202ENST00000491922 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
CCDC6-202ENST00000491922 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
CCDC6-202ENST00000491922 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
CCDC6-202ENST00000491922 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
CCDC6-202ENST00000491922 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
CCDC6-202ENST00000491922 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
CCDC6-202ENST00000491922 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
CCDC6-202ENST00000491922 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
CCDC6-202ENST00000491922 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
CCDC6-202ENST00000491922 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
CCDC6-202ENST00000491922 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
CCDC6-202ENST00000491922 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
CCDC6-202ENST00000491922 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 415.5 ms