RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 LINC00313P59037 77 aa5.22□□□□□ -1.57
BRCA1-219ENST00000491747 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
BRCA1-219ENST00000491747 A0A1B0GU69 56 aa5.18□□□□□ -1.58
BRCA1-219ENST00000491747 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
BRCA1-219ENST00000491747 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
BRCA1-219ENST00000491747 MUC2Q02817 5179 aa5.14□□□□□ -1.59
BRCA1-219ENST00000491747 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
BRCA1-219ENST00000491747 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
BRCA1-219ENST00000491747 UQCR11O14957 56 aa5.11□□□□□ -1.59
BRCA1-219ENST00000491747 XP32Q5T750 250 aa5.1□□□□□ -1.59
BRCA1-219ENST00000491747 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
BRCA1-219ENST00000491747 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
BRCA1-219ENST00000491747 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
BRCA1-219ENST00000491747 KRTAP4-1Q9BYQ7 146 aa5.07□□□□□ -1.6
BRCA1-219ENST00000491747 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
BRCA1-219ENST00000491747 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
BRCA1-219ENST00000491747 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
BRCA1-219ENST00000491747 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
BRCA1-219ENST00000491747 RPL37P61927 97 aaKnown RBP4.97□□□□□ -1.61
BRCA1-219ENST00000491747 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
BRCA1-219ENST00000491747 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-219ENST00000491747 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
BRCA1-219ENST00000491747 LCE2CQ5TA81 110 aa4.9□□□□□ -1.62
BRCA1-219ENST00000491747 CSAG1Q6PB30 78 aa4.9□□□□□ -1.62
BRCA1-219ENST00000491747 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
BRCA1-219ENST00000491747 A8MUU9 505 aa4.89□□□□□ -1.63
BRCA1-219ENST00000491747 H0YAA0 97 aa4.87□□□□□ -1.63
BRCA1-219ENST00000491747 H3BS24 57 aa4.87□□□□□ -1.63
BRCA1-219ENST00000491747 A0A1B0GU33 70 aa4.85□□□□□ -1.63
BRCA1-219ENST00000491747 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
BRCA1-219ENST00000491747 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-219ENST00000491747 KRTAP3-1Q9BYR8 98 aa4.82□□□□□ -1.64
BRCA1-219ENST00000491747 MT1HP80294 61 aa4.81□□□□□ -1.64
BRCA1-219ENST00000491747 K7ERS5 55 aa4.78□□□□□ -1.64
BRCA1-219ENST00000491747 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
BRCA1-219ENST00000491747 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
BRCA1-219ENST00000491747 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-219ENST00000491747 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.65
BRCA1-219ENST00000491747 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-219ENST00000491747 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-219ENST00000491747 M0R2T5 61 aa4.68□□□□□ -1.66
BRCA1-219ENST00000491747 ROMO1P60602 79 aa4.67□□□□□ -1.66
BRCA1-219ENST00000491747 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
BRCA1-219ENST00000491747 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
BRCA1-219ENST00000491747 S4R3F8 94 aa4.59□□□□□ -1.67
BRCA1-219ENST00000491747 A0A0D9SG42 100 aa4.58□□□□□ -1.68
BRCA1-219ENST00000491747 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
BRCA1-219ENST00000491747 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
BRCA1-219ENST00000491747 KRTAP3-2Q9BYR7 98 aa4.57□□□□□ -1.68
BRCA1-219ENST00000491747 MT2AP02795 61 aa4.51□□□□□ -1.69
BRCA1-219ENST00000491747 P0C880 135 aa4.51□□□□□ -1.69
BRCA1-219ENST00000491747 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
BRCA1-219ENST00000491747 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
BRCA1-219ENST00000491747 MT1FP04733 61 aa4.49□□□□□ -1.69
BRCA1-219ENST00000491747 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
BRCA1-219ENST00000491747 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
BRCA1-219ENST00000491747 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
BRCA1-219ENST00000491747 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
BRCA1-219ENST00000491747 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
BRCA1-219ENST00000491747 M0QZ58 72 aa4.43□□□□□ -1.7
BRCA1-219ENST00000491747 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
BRCA1-219ENST00000491747 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
BRCA1-219ENST00000491747 LCE2BO14633 110 aa4.4□□□□□ -1.71
BRCA1-219ENST00000491747 USH2AO75445 5202 aa4.38□□□□□ -1.71
BRCA1-219ENST00000491747 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
BRCA1-219ENST00000491747 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
BRCA1-219ENST00000491747 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
BRCA1-219ENST00000491747 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
BRCA1-219ENST00000491747 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
BRCA1-219ENST00000491747 R4GN34 69 aa4.28□□□□□ -1.72
BRCA1-219ENST00000491747 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
BRCA1-219ENST00000491747 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
BRCA1-219ENST00000491747 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-219ENST00000491747 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
BRCA1-219ENST00000491747 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
BRCA1-219ENST00000491747 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-219ENST00000491747 MT1BP07438 61 aa4.15□□□□□ -1.75
BRCA1-219ENST00000491747 KRTAP19-8Q3LI54 63 aa4.14□□□□□ -1.75
BRCA1-219ENST00000491747 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
BRCA1-219ENST00000491747 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
BRCA1-219ENST00000491747 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.76
BRCA1-219ENST00000491747 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
BRCA1-219ENST00000491747 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
BRCA1-219ENST00000491747 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
BRCA1-219ENST00000491747 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
BRCA1-219ENST00000491747 KRTAP10-5P60370 271 aa4.01□□□□□ -1.77
BRCA1-219ENST00000491747 TNP1P09430 55 aa3.95□□□□□ -1.78
BRCA1-219ENST00000491747 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
BRCA1-219ENST00000491747 MT1XP80297 61 aa3.91□□□□□ -1.78
BRCA1-219ENST00000491747 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
BRCA1-219ENST00000491747 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
BRCA1-219ENST00000491747 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
BRCA1-219ENST00000491747 KMT2DO14686 5537 aa3.79□□□□□ -1.8
BRCA1-219ENST00000491747 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
BRCA1-219ENST00000491747 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
BRCA1-219ENST00000491747 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-219ENST00000491747 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
BRCA1-219ENST00000491747 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
BRCA1-219ENST00000491747 NEBP20929 6669 aa3.73□□□□□ -1.81
BRCA1-219ENST00000491747 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 299.3 ms