RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
CMSS1-206ENST00000491299 FAM236AA0A1B0GUQ0 79 aa4.41□□□□□ -1.7
CMSS1-206ENST00000491299 FAM236BA0A1B0GV22 79 aa4.41□□□□□ -1.7
CMSS1-206ENST00000491299 FAM236DA0A1B0GTK5 79 aa4.4□□□□□ -1.71
CMSS1-206ENST00000491299 FAM236CP0DP71 79 aa4.4□□□□□ -1.71
CMSS1-206ENST00000491299 SCGB1A1P11684 91 aa4.39□□□□□ -1.71
CMSS1-206ENST00000491299 Q5W150 140 aa4.39□□□□□ -1.71
CMSS1-206ENST00000491299 ZCCHC13Q8WW36 166 aaKnown RBP4.39□□□□□ -1.71
CMSS1-206ENST00000491299 RBM12B-AS1Q9P1G2 102 aa4.39□□□□□ -1.71
CMSS1-206ENST00000491299 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-206ENST00000491299 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
CMSS1-206ENST00000491299 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
CMSS1-206ENST00000491299 UQCRQO14949 82 aa4.34□□□□□ -1.71
CMSS1-206ENST00000491299 ATOX1O00244 68 aa4.33□□□□□ -1.72
CMSS1-206ENST00000491299 TRAV7A0A075B6U4 112 aa4.32□□□□□ -1.72
CMSS1-206ENST00000491299 H0Y9P7 68 aa4.32□□□□□ -1.72
CMSS1-206ENST00000491299 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
CMSS1-206ENST00000491299 HRES1P13985 223 aa4.31□□□□□ -1.72
CMSS1-206ENST00000491299 SPINK7P58062 85 aa4.3□□□□□ -1.72
CMSS1-206ENST00000491299 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
CMSS1-206ENST00000491299 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
CMSS1-206ENST00000491299 MP68P56378 58 aa4.28□□□□□ -1.72
CMSS1-206ENST00000491299 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
CMSS1-206ENST00000491299 SERP2Q8N6R1 65 aa4.28□□□□□ -1.72
CMSS1-206ENST00000491299 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
CMSS1-206ENST00000491299 C1orf64Q8NEQ6 169 aa4.27□□□□□ -1.73
CMSS1-206ENST00000491299 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
CMSS1-206ENST00000491299 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
CMSS1-206ENST00000491299 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
CMSS1-206ENST00000491299 COX7CP15954 63 aa4.24□□□□□ -1.73
CMSS1-206ENST00000491299 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
CMSS1-206ENST00000491299 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
CMSS1-206ENST00000491299 H3BPC8 53 aa4.23□□□□□ -1.73
CMSS1-206ENST00000491299 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
CMSS1-206ENST00000491299 KLKP1Q107X0 134 aa4.22□□□□□ -1.73
CMSS1-206ENST00000491299 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
CMSS1-206ENST00000491299 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
CMSS1-206ENST00000491299 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
CMSS1-206ENST00000491299 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
CMSS1-206ENST00000491299 MT2AP02795 61 aa4.17□□□□□ -1.74
CMSS1-206ENST00000491299 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
CMSS1-206ENST00000491299 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
CMSS1-206ENST00000491299 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
CMSS1-206ENST00000491299 MT1FP04733 61 aa4.14□□□□□ -1.75
CMSS1-206ENST00000491299 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
CMSS1-206ENST00000491299 H7BZZ5 65 aa4.11□□□□□ -1.75
CMSS1-206ENST00000491299 USH2AO75445 5202 aa4.11□□□□□ -1.75
CMSS1-206ENST00000491299 NDUFC1O43677 76 aa4.09□□□□□ -1.75
CMSS1-206ENST00000491299 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
CMSS1-206ENST00000491299 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
CMSS1-206ENST00000491299 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
CMSS1-206ENST00000491299 A8MUN3 132 aa4.06□□□□□ -1.76
CMSS1-206ENST00000491299 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
CMSS1-206ENST00000491299 S4R3F8 94 aa4.05□□□□□ -1.76
CMSS1-206ENST00000491299 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
CMSS1-206ENST00000491299 ACYP2P14621 99 aa4.03□□□□□ -1.76
CMSS1-206ENST00000491299 LCA10Q71F78 164 aa4.03□□□□□ -1.76
CMSS1-206ENST00000491299 TMEM258P61165 79 aa4□□□□□ -1.77
CMSS1-206ENST00000491299 CSAG1Q6PB30 78 aa4□□□□□ -1.77
CMSS1-206ENST00000491299 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
CMSS1-206ENST00000491299 COA5Q86WW8 74 aa3.98□□□□□ -1.77
CMSS1-206ENST00000491299 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
CMSS1-206ENST00000491299 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
CMSS1-206ENST00000491299 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
CMSS1-206ENST00000491299 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
CMSS1-206ENST00000491299 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
CMSS1-206ENST00000491299 SPTSSBQ8NFR3 76 aa3.9□□□□□ -1.79
CMSS1-206ENST00000491299 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
CMSS1-206ENST00000491299 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CMSS1-206ENST00000491299 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
CMSS1-206ENST00000491299 Q5VV11 94 aa3.87□□□□□ -1.79
CMSS1-206ENST00000491299 NEBP20929 6669 aa3.86□□□□□ -1.79
CMSS1-206ENST00000491299 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
CMSS1-206ENST00000491299 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
CMSS1-206ENST00000491299 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
CMSS1-206ENST00000491299 A6NN06 94 aa3.83□□□□□ -1.8
CMSS1-206ENST00000491299 H0YAA0 97 aa3.82□□□□□ -1.8
CMSS1-206ENST00000491299 P0C880 135 aa3.82□□□□□ -1.8
CMSS1-206ENST00000491299 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
CMSS1-206ENST00000491299 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
CMSS1-206ENST00000491299 MT1BP07438 61 aa3.79□□□□□ -1.8
CMSS1-206ENST00000491299 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
CMSS1-206ENST00000491299 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
CMSS1-206ENST00000491299 SEC61GP60059 68 aa3.76□□□□□ -1.81
CMSS1-206ENST00000491299 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
CMSS1-206ENST00000491299 A0A1B0GU69 56 aa3.75□□□□□ -1.81
CMSS1-206ENST00000491299 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
CMSS1-206ENST00000491299 PRR15LQ9BU68 103 aa3.73□□□□□ -1.81
CMSS1-206ENST00000491299 R4GN34 69 aa3.72□□□□□ -1.81
CMSS1-206ENST00000491299 M0QZ58 72 aa3.71□□□□□ -1.82
CMSS1-206ENST00000491299 Q1T7F1 81 aa3.71□□□□□ -1.82
CMSS1-206ENST00000491299 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
CMSS1-206ENST00000491299 V9GYY9 64 aa3.7□□□□□ -1.82
CMSS1-206ENST00000491299 A0A1B0GU33 70 aa3.69□□□□□ -1.82
CMSS1-206ENST00000491299 PSPHP1O15172 72 aa3.69□□□□□ -1.82
CMSS1-206ENST00000491299 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
CMSS1-206ENST00000491299 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
CMSS1-206ENST00000491299 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
CMSS1-206ENST00000491299 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
CMSS1-206ENST00000491299 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms