RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
CLDN1-202ENST00000490800 H0Y9P7 68 aa4.02□□□□□ -1.77
CLDN1-202ENST00000490800 C5orf47Q569G3 176 aa4.02□□□□□ -1.77
CLDN1-202ENST00000490800 PCOTHQ58A44 107 aa4.02□□□□□ -1.77
CLDN1-202ENST00000490800 C20orf197Q8N268 126 aa4.01□□□□□ -1.77
CLDN1-202ENST00000490800 MP68P56378 58 aa4□□□□□ -1.77
CLDN1-202ENST00000490800 RPL37P61927 97 aaKnown RBP4□□□□□ -1.77
CLDN1-202ENST00000490800 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
CLDN1-202ENST00000490800 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
CLDN1-202ENST00000490800 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
CLDN1-202ENST00000490800 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
CLDN1-202ENST00000490800 H3BPC8 53 aa3.98□□□□□ -1.77
CLDN1-202ENST00000490800 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
CLDN1-202ENST00000490800 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
CLDN1-202ENST00000490800 CYSTM1Q9H1C7 97 aa3.98□□□□□ -1.77
CLDN1-202ENST00000490800 MT1HP80294 61 aa3.96□□□□□ -1.78
CLDN1-202ENST00000490800 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
CLDN1-202ENST00000490800 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
CLDN1-202ENST00000490800 ATP11AUNQ6ZP68 121 aa3.95□□□□□ -1.78
CLDN1-202ENST00000490800 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
CLDN1-202ENST00000490800 H7BZZ5 65 aa3.93□□□□□ -1.78
CLDN1-202ENST00000490800 NDUFC1O43677 76 aa3.92□□□□□ -1.78
CLDN1-202ENST00000490800 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
CLDN1-202ENST00000490800 MT3P25713 68 aa3.91□□□□□ -1.78
CLDN1-202ENST00000490800 C7orf65Q6ZTY9 151 aa3.91□□□□□ -1.78
CLDN1-202ENST00000490800 SPINK7P58062 85 aa3.9□□□□□ -1.79
CLDN1-202ENST00000490800 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
CLDN1-202ENST00000490800 M0R2T5 61 aa3.89□□□□□ -1.79
CLDN1-202ENST00000490800 COX6B2Q6YFQ2 88 aa3.89□□□□□ -1.79
CLDN1-202ENST00000490800 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
CLDN1-202ENST00000490800 HRES1P13985 223 aa3.87□□□□□ -1.79
CLDN1-202ENST00000490800 TMEM258P61165 79 aa3.87□□□□□ -1.79
CLDN1-202ENST00000490800 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
CLDN1-202ENST00000490800 FLGP20930 4061 aaPredicted RBP3.85□□□□□ -1.79
CLDN1-202ENST00000490800 FAM236DA0A1B0GTK5 79 aa3.85□□□□□ -1.79
CLDN1-202ENST00000490800 FAM236CP0DP71 79 aa3.85□□□□□ -1.79
CLDN1-202ENST00000490800 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
CLDN1-202ENST00000490800 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
CLDN1-202ENST00000490800 C4orf26Q17RF5 130 aa3.83□□□□□ -1.8
CLDN1-202ENST00000490800 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
CLDN1-202ENST00000490800 A8MUN3 132 aa3.77□□□□□ -1.81
CLDN1-202ENST00000490800 ACYP2P14621 99 aa3.76□□□□□ -1.81
CLDN1-202ENST00000490800 SERP1Q9Y6X1 66 aa3.76□□□□□ -1.81
CLDN1-202ENST00000490800 COA5Q86WW8 74 aa3.75□□□□□ -1.81
CLDN1-202ENST00000490800 RBM12B-AS1Q9P1G2 102 aa3.75□□□□□ -1.81
CLDN1-202ENST00000490800 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
CLDN1-202ENST00000490800 RPS28P62857 69 aaKnown RBP3.72□□□□□ -1.81
CLDN1-202ENST00000490800 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
CLDN1-202ENST00000490800 USH2AO75445 5202 aa3.71□□□□□ -1.81
CLDN1-202ENST00000490800 CHKB-CPT1BH3BT56 60 aa3.69□□□□□ -1.82
CLDN1-202ENST00000490800 MT2AP02795 61 aa3.68□□□□□ -1.82
CLDN1-202ENST00000490800 S4R3F8 94 aa3.67□□□□□ -1.82
CLDN1-202ENST00000490800 LCA10Q71F78 164 aa3.66□□□□□ -1.82
CLDN1-202ENST00000490800 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
CLDN1-202ENST00000490800 MT1FP04733 61 aa3.65□□□□□ -1.83
CLDN1-202ENST00000490800 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
CLDN1-202ENST00000490800 SPTSSBQ8NFR3 76 aa3.63□□□□□ -1.83
CLDN1-202ENST00000490800 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
CLDN1-202ENST00000490800 Q1T7F1 81 aa3.59□□□□□ -1.83
CLDN1-202ENST00000490800 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
CLDN1-202ENST00000490800 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
CLDN1-202ENST00000490800 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CLDN1-202ENST00000490800 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CLDN1-202ENST00000490800 V9GYY9 64 aa3.57□□□□□ -1.84
CLDN1-202ENST00000490800 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
CLDN1-202ENST00000490800 PRR15LQ9BU68 103 aa3.54□□□□□ -1.84
CLDN1-202ENST00000490800 A0A1B0GU69 56 aa3.53□□□□□ -1.84
CLDN1-202ENST00000490800 PSPHP1O15172 72 aa3.53□□□□□ -1.84
CLDN1-202ENST00000490800 H0YAA0 97 aa3.52□□□□□ -1.85
CLDN1-202ENST00000490800 SEC61GP60059 68 aa3.51□□□□□ -1.85
CLDN1-202ENST00000490800 Q5VV11 94 aa3.51□□□□□ -1.85
CLDN1-202ENST00000490800 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
CLDN1-202ENST00000490800 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
CLDN1-202ENST00000490800 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
CLDN1-202ENST00000490800 P0C880 135 aa3.49□□□□□ -1.85
CLDN1-202ENST00000490800 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
CLDN1-202ENST00000490800 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
CLDN1-202ENST00000490800 A0A1B0GU33 70 aa3.45□□□□□ -1.86
CLDN1-202ENST00000490800 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
CLDN1-202ENST00000490800 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
CLDN1-202ENST00000490800 A6NED7 52 aa3.41□□□□□ -1.86
CLDN1-202ENST00000490800 UQCR11O14957 56 aa3.41□□□□□ -1.86
CLDN1-202ENST00000490800 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
CLDN1-202ENST00000490800 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
CLDN1-202ENST00000490800 M0QZ58 72 aa3.38□□□□□ -1.87
CLDN1-202ENST00000490800 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
CLDN1-202ENST00000490800 CRIPTQ9P021 101 aa3.38□□□□□ -1.87
CLDN1-202ENST00000490800 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
CLDN1-202ENST00000490800 R4GN34 69 aa3.37□□□□□ -1.87
CLDN1-202ENST00000490800 A8MU10 97 aa3.35□□□□□ -1.87
CLDN1-202ENST00000490800 CDC42SE1Q9NRR8 79 aa3.35□□□□□ -1.87
CLDN1-202ENST00000490800 A0A0D9SG42 100 aa3.33□□□□□ -1.88
CLDN1-202ENST00000490800 MT1BP07438 61 aa3.33□□□□□ -1.88
CLDN1-202ENST00000490800 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
CLDN1-202ENST00000490800 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
CLDN1-202ENST00000490800 A6NN06 94 aa3.32□□□□□ -1.88
CLDN1-202ENST00000490800 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
CLDN1-202ENST00000490800 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
CLDN1-202ENST00000490800 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
CLDN1-202ENST00000490800 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms