RNA–Protein interactions for RNA: ENST00000490363.3

KCNT1-210, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 5

Gene KCNT1, Length 4,065 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-210ENST00000490363 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
KCNT1-210ENST00000490363 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
KCNT1-210ENST00000490363 S4R3F8 94 aa6.94□□□□□ -1.3
KCNT1-210ENST00000490363 RYR1P21817 5038 aa6.94□□□□□ -1.3
KCNT1-210ENST00000490363 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
KCNT1-210ENST00000490363 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
KCNT1-210ENST00000490363 RYR2Q92736 4967 aa6.9□□□□□ -1.3
KCNT1-210ENST00000490363 H0YAA0 97 aa6.9□□□□□ -1.31
KCNT1-210ENST00000490363 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
KCNT1-210ENST00000490363 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
KCNT1-210ENST00000490363 LUZP6Q538Z0 58 aa6.89□□□□□ -1.31
KCNT1-210ENST00000490363 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
KCNT1-210ENST00000490363 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
KCNT1-210ENST00000490363 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.31
KCNT1-210ENST00000490363 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
KCNT1-210ENST00000490363 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
KCNT1-210ENST00000490363 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
KCNT1-210ENST00000490363 R4GN34 69 aa6.81□□□□□ -1.32
KCNT1-210ENST00000490363 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
KCNT1-210ENST00000490363 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
KCNT1-210ENST00000490363 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
KCNT1-210ENST00000490363 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
KCNT1-210ENST00000490363 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
KCNT1-210ENST00000490363 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
KCNT1-210ENST00000490363 M0QZ58 72 aa6.73□□□□□ -1.33
KCNT1-210ENST00000490363 EPPK1P58107 5090 aaKnown RBP6.68□□□□□ -1.34
KCNT1-210ENST00000490363 P0C880 135 aa6.67□□□□□ -1.34
KCNT1-210ENST00000490363 PKD1P98161 4303 aa6.63□□□□□ -1.35
KCNT1-210ENST00000490363 HERC2O95714 4834 aa6.63□□□□□ -1.35
KCNT1-210ENST00000490363 HSPG2P98160 4391 aa6.55□□□□□ -1.36
KCNT1-210ENST00000490363 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
KCNT1-210ENST00000490363 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
KCNT1-210ENST00000490363 LRP2P98164 4655 aa6.42□□□□□ -1.38
KCNT1-210ENST00000490363 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
KCNT1-210ENST00000490363 ABCA13Q86UQ4 5058 aa6.39□□□□□ -1.39
KCNT1-210ENST00000490363 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
KCNT1-210ENST00000490363 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
KCNT1-210ENST00000490363 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
KCNT1-210ENST00000490363 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
KCNT1-210ENST00000490363 LPAP08519 4548 aa6.25□□□□□ -1.41
KCNT1-210ENST00000490363 HERC1Q15751 4861 aa6.22□□□□□ -1.41
KCNT1-210ENST00000490363 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.41
KCNT1-210ENST00000490363 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
KCNT1-210ENST00000490363 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
KCNT1-210ENST00000490363 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
KCNT1-210ENST00000490363 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
KCNT1-210ENST00000490363 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
KCNT1-210ENST00000490363 TNP1P09430 55 aa6.1□□□□□ -1.43
KCNT1-210ENST00000490363 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
KCNT1-210ENST00000490363 TNXBP22105 4242 aa6.08□□□□□ -1.44
KCNT1-210ENST00000490363 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
KCNT1-210ENST00000490363 MUC2Q02817 5179 aa6.03□□□□□ -1.44
KCNT1-210ENST00000490363 UBR4Q5T4S7 5183 aa5.98□□□□□ -1.45
KCNT1-210ENST00000490363 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
KCNT1-210ENST00000490363 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
KCNT1-210ENST00000490363 MT1HP80294 61 aa5.86□□□□□ -1.47
KCNT1-210ENST00000490363 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
KCNT1-210ENST00000490363 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
KCNT1-210ENST00000490363 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
KCNT1-210ENST00000490363 MT2AP02795 61 aa5.68□□□□□ -1.5
KCNT1-210ENST00000490363 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
KCNT1-210ENST00000490363 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
KCNT1-210ENST00000490363 MT1FP04733 61 aa5.66□□□□□ -1.5
KCNT1-210ENST00000490363 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
KCNT1-210ENST00000490363 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
KCNT1-210ENST00000490363 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
KCNT1-210ENST00000490363 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
KCNT1-210ENST00000490363 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
KCNT1-210ENST00000490363 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
KCNT1-210ENST00000490363 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
KCNT1-210ENST00000490363 INE1O15225 51 aa5.29□□□□□ -1.56
KCNT1-210ENST00000490363 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
KCNT1-210ENST00000490363 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
KCNT1-210ENST00000490363 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
KCNT1-210ENST00000490363 MT1BP07438 61 aa5.22□□□□□ -1.57
KCNT1-210ENST00000490363 USH2AO75445 5202 aa5.21□□□□□ -1.58
KCNT1-210ENST00000490363 LCE2BO14633 110 aa5.2□□□□□ -1.58
KCNT1-210ENST00000490363 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
KCNT1-210ENST00000490363 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
KCNT1-210ENST00000490363 MT1XP80297 61 aa5.1□□□□□ -1.59
KCNT1-210ENST00000490363 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.6
KCNT1-210ENST00000490363 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
KCNT1-210ENST00000490363 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
KCNT1-210ENST00000490363 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
KCNT1-210ENST00000490363 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
KCNT1-210ENST00000490363 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
KCNT1-210ENST00000490363 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
KCNT1-210ENST00000490363 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
KCNT1-210ENST00000490363 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
KCNT1-210ENST00000490363 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
KCNT1-210ENST00000490363 KMT2DO14686 5537 aa4.83□□□□□ -1.64
KCNT1-210ENST00000490363 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
KCNT1-210ENST00000490363 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
KCNT1-210ENST00000490363 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
KCNT1-210ENST00000490363 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
KCNT1-210ENST00000490363 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
KCNT1-210ENST00000490363 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
KCNT1-210ENST00000490363 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
KCNT1-210ENST00000490363 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
KCNT1-210ENST00000490363 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms