RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
RAB3GAP1-205ENST00000489858 CHKB-CPT1BH3BT56 60 aa5.32□□□□□ -1.56
RAB3GAP1-205ENST00000489858 FAT1Q14517 4588 aa5.29□□□□□ -1.56
RAB3GAP1-205ENST00000489858 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
RAB3GAP1-205ENST00000489858 A6NED7 52 aa5.27□□□□□ -1.57
RAB3GAP1-205ENST00000489858 A8MUU9 505 aa5.25□□□□□ -1.57
RAB3GAP1-205ENST00000489858 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
RAB3GAP1-205ENST00000489858 C20orf166-AS1Q96NR2 134 aa5.24□□□□□ -1.57
RAB3GAP1-205ENST00000489858 C9orf92A6NGG3 77 aa5.23□□□□□ -1.57
RAB3GAP1-205ENST00000489858 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
RAB3GAP1-205ENST00000489858 Q5VSD8 79 aa5.19□□□□□ -1.58
RAB3GAP1-205ENST00000489858 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
RAB3GAP1-205ENST00000489858 A0A1B0GU69 56 aa5.18□□□□□ -1.58
RAB3GAP1-205ENST00000489858 SPINK7P58062 85 aa5.17□□□□□ -1.58
RAB3GAP1-205ENST00000489858 LCA10Q71F78 164 aa5.17□□□□□ -1.58
RAB3GAP1-205ENST00000489858 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
RAB3GAP1-205ENST00000489858 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
RAB3GAP1-205ENST00000489858 A8MU10 97 aa5.15□□□□□ -1.59
RAB3GAP1-205ENST00000489858 KRTAP10-8P60410 259 aa5.15□□□□□ -1.59
RAB3GAP1-205ENST00000489858 HSPG2P98160 4391 aa5.15□□□□□ -1.59
RAB3GAP1-205ENST00000489858 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
RAB3GAP1-205ENST00000489858 TNXBP22105 4242 aa5.14□□□□□ -1.59
RAB3GAP1-205ENST00000489858 RYR1P21817 5038 aa5.13□□□□□ -1.59
RAB3GAP1-205ENST00000489858 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
RAB3GAP1-205ENST00000489858 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
RAB3GAP1-205ENST00000489858 SEC61GP60059 68 aa5.08□□□□□ -1.6
RAB3GAP1-205ENST00000489858 UQCR11O14957 56 aa5.07□□□□□ -1.6
RAB3GAP1-205ENST00000489858 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.07□□□□□ -1.6
RAB3GAP1-205ENST00000489858 A6NN06 94 aa5.06□□□□□ -1.6
RAB3GAP1-205ENST00000489858 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
RAB3GAP1-205ENST00000489858 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
RAB3GAP1-205ENST00000489858 RYR3Q15413 4870 aa5.06□□□□□ -1.6
RAB3GAP1-205ENST00000489858 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
RAB3GAP1-205ENST00000489858 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
RAB3GAP1-205ENST00000489858 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
RAB3GAP1-205ENST00000489858 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
RAB3GAP1-205ENST00000489858 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
RAB3GAP1-205ENST00000489858 MT1HL1P0DM35 61 aa4.99□□□□□ -1.61
RAB3GAP1-205ENST00000489858 KRTAP5-11Q6L8G4 156 aa4.98□□□□□ -1.61
RAB3GAP1-205ENST00000489858 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
RAB3GAP1-205ENST00000489858 KIAA1109Q2LD37 5005 aa4.94□□□□□ -1.62
RAB3GAP1-205ENST00000489858 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
RAB3GAP1-205ENST00000489858 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
RAB3GAP1-205ENST00000489858 A0A1B0GU33 70 aa4.92□□□□□ -1.62
RAB3GAP1-205ENST00000489858 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
RAB3GAP1-205ENST00000489858 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
RAB3GAP1-205ENST00000489858 S4R3F8 94 aa4.9□□□□□ -1.63
RAB3GAP1-205ENST00000489858 H0YAA0 97 aa4.88□□□□□ -1.63
RAB3GAP1-205ENST00000489858 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
RAB3GAP1-205ENST00000489858 DMBT1Q9UGM3 2413 aaPredicted RBP4.84□□□□□ -1.63
RAB3GAP1-205ENST00000489858 BIRC6Q9NR09 4857 aa4.83□□□□□ -1.64
RAB3GAP1-205ENST00000489858 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
RAB3GAP1-205ENST00000489858 K7ERS5 55 aa4.8□□□□□ -1.64
RAB3GAP1-205ENST00000489858 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
RAB3GAP1-205ENST00000489858 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
RAB3GAP1-205ENST00000489858 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
RAB3GAP1-205ENST00000489858 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
RAB3GAP1-205ENST00000489858 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
RAB3GAP1-205ENST00000489858 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
RAB3GAP1-205ENST00000489858 LRP2P98164 4655 aa4.7□□□□□ -1.66
RAB3GAP1-205ENST00000489858 HERC2O95714 4834 aa4.7□□□□□ -1.66
RAB3GAP1-205ENST00000489858 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
RAB3GAP1-205ENST00000489858 P0C880 135 aa4.69□□□□□ -1.66
RAB3GAP1-205ENST00000489858 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
RAB3GAP1-205ENST00000489858 LPAP08519 4548 aa4.66□□□□□ -1.66
RAB3GAP1-205ENST00000489858 A0A0D9SG42 100 aa4.66□□□□□ -1.66
RAB3GAP1-205ENST00000489858 M0QZ58 72 aa4.62□□□□□ -1.67
RAB3GAP1-205ENST00000489858 ROMO1P60602 79 aa4.62□□□□□ -1.67
RAB3GAP1-205ENST00000489858 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
RAB3GAP1-205ENST00000489858 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
RAB3GAP1-205ENST00000489858 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
RAB3GAP1-205ENST00000489858 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
RAB3GAP1-205ENST00000489858 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
RAB3GAP1-205ENST00000489858 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
RAB3GAP1-205ENST00000489858 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
RAB3GAP1-205ENST00000489858 R4GN34 69 aa4.51□□□□□ -1.69
RAB3GAP1-205ENST00000489858 MT3P25713 68 aa4.49□□□□□ -1.69
RAB3GAP1-205ENST00000489858 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
RAB3GAP1-205ENST00000489858 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
RAB3GAP1-205ENST00000489858 HERC1Q15751 4861 aa4.47□□□□□ -1.69
RAB3GAP1-205ENST00000489858 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
RAB3GAP1-205ENST00000489858 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
RAB3GAP1-205ENST00000489858 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
RAB3GAP1-205ENST00000489858 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
RAB3GAP1-205ENST00000489858 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
RAB3GAP1-205ENST00000489858 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
RAB3GAP1-205ENST00000489858 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
RAB3GAP1-205ENST00000489858 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
RAB3GAP1-205ENST00000489858 M0R2T5 61 aa4.21□□□□□ -1.74
RAB3GAP1-205ENST00000489858 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
RAB3GAP1-205ENST00000489858 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
RAB3GAP1-205ENST00000489858 MT1HP80294 61 aa4.18□□□□□ -1.74
RAB3GAP1-205ENST00000489858 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
RAB3GAP1-205ENST00000489858 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
RAB3GAP1-205ENST00000489858 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
RAB3GAP1-205ENST00000489858 MUC2Q02817 5179 aa4.16□□□□□ -1.74
RAB3GAP1-205ENST00000489858 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
RAB3GAP1-205ENST00000489858 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
RAB3GAP1-205ENST00000489858 MT2AP02795 61 aa4.11□□□□□ -1.75
RAB3GAP1-205ENST00000489858 TNP1P09430 55 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms