RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 TNXBP22105 4242 aa10.37□□□□□ -0.75
SYNGR1-207ENST00000489206 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
SYNGR1-207ENST00000489206 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
SYNGR1-207ENST00000489206 RPL37P61927 97 aaKnown RBP10.28□□□□□ -0.76
SYNGR1-207ENST00000489206 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
SYNGR1-207ENST00000489206 MYCBP2O75592 4640 aa10.22□□□□□ -0.77
SYNGR1-207ENST00000489206 XP32Q5T750 250 aa10.19□□□□□ -0.78
SYNGR1-207ENST00000489206 A0A1B0GU33 70 aa10.19□□□□□ -0.78
SYNGR1-207ENST00000489206 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
SYNGR1-207ENST00000489206 H0YAA0 97 aa10.16□□□□□ -0.78
SYNGR1-207ENST00000489206 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
SYNGR1-207ENST00000489206 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
SYNGR1-207ENST00000489206 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
SYNGR1-207ENST00000489206 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
SYNGR1-207ENST00000489206 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
SYNGR1-207ENST00000489206 S4R3F8 94 aa9.99□□□□□ -0.81
SYNGR1-207ENST00000489206 HERC1Q15751 4861 aa9.95□□□□□ -0.82
SYNGR1-207ENST00000489206 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
SYNGR1-207ENST00000489206 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
SYNGR1-207ENST00000489206 K7ERS5 55 aa9.89□□□□□ -0.83
SYNGR1-207ENST00000489206 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
SYNGR1-207ENST00000489206 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
SYNGR1-207ENST00000489206 J3QL48 77 aa9.81□□□□□ -0.84
SYNGR1-207ENST00000489206 LINC01554Q52M75 96 aa9.77□□□□□ -0.84
SYNGR1-207ENST00000489206 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
SYNGR1-207ENST00000489206 H3BS24 57 aa9.7□□□□□ -0.86
SYNGR1-207ENST00000489206 P0C880 135 aa9.68□□□□□ -0.86
SYNGR1-207ENST00000489206 LRP2P98164 4655 aa9.67□□□□□ -0.86
SYNGR1-207ENST00000489206 KRTAP25-1Q3LHN0 102 aa9.64□□□□□ -0.87
SYNGR1-207ENST00000489206 A0A0D9SG42 100 aa9.61□□□□□ -0.87
SYNGR1-207ENST00000489206 ROMO1P60602 79 aa9.61□□□□□ -0.87
SYNGR1-207ENST00000489206 LPAP08519 4548 aa9.6□□□□□ -0.87
SYNGR1-207ENST00000489206 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
SYNGR1-207ENST00000489206 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
SYNGR1-207ENST00000489206 M0QZ58 72 aa9.52□□□□□ -0.89
SYNGR1-207ENST00000489206 KRTAP12-2P59991 146 aa9.42□□□□□ -0.9
SYNGR1-207ENST00000489206 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
SYNGR1-207ENST00000489206 MUC17Q685J3 4493 aa9.38□□□□□ -0.91
SYNGR1-207ENST00000489206 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
SYNGR1-207ENST00000489206 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
SYNGR1-207ENST00000489206 SPINT4Q6UDR6 99 aa9.33□□□□□ -0.92
SYNGR1-207ENST00000489206 A0A0A0MQY5 61 aa9.31□□□□□ -0.92
SYNGR1-207ENST00000489206 KRTAP4-1Q9BYQ7 146 aa9.29□□□□□ -0.92
SYNGR1-207ENST00000489206 R4GN34 69 aa9.24□□□□□ -0.93
SYNGR1-207ENST00000489206 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
SYNGR1-207ENST00000489206 RNF213Q63HN8 5207 aa9.17□□□□□ -0.94
SYNGR1-207ENST00000489206 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
SYNGR1-207ENST00000489206 MUC2Q02817 5179 aa9.06□□□□□ -0.96
SYNGR1-207ENST00000489206 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
SYNGR1-207ENST00000489206 FLGP20930 4061 aaPredicted RBP8.93□□□□□ -0.98
SYNGR1-207ENST00000489206 KRTAP15-1Q3LI76 137 aa8.75□□□□□ -1.01
SYNGR1-207ENST00000489206 CAMK2N1Q7Z7J9 78 aa8.75□□□□□ -1.01
SYNGR1-207ENST00000489206 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.02
SYNGR1-207ENST00000489206 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
SYNGR1-207ENST00000489206 PP632Q6XCG6 107 aa8.64□□□□□ -1.03
SYNGR1-207ENST00000489206 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
SYNGR1-207ENST00000489206 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
SYNGR1-207ENST00000489206 TNP1P09430 55 aa8.45□□□□□ -1.06
SYNGR1-207ENST00000489206 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
SYNGR1-207ENST00000489206 KRTAP23-1A1A580 65 aa8.44□□□□□ -1.06
SYNGR1-207ENST00000489206 MT1HP80294 61 aa8.44□□□□□ -1.06
SYNGR1-207ENST00000489206 M0R2T5 61 aa8.43□□□□□ -1.06
SYNGR1-207ENST00000489206 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
SYNGR1-207ENST00000489206 NDUFAF8A1L188 74 aa8.39□□□□□ -1.07
SYNGR1-207ENST00000489206 MT2AP02795 61 aa8.29□□□□□ -1.08
SYNGR1-207ENST00000489206 MT1FP04733 61 aa8.26□□□□□ -1.09
SYNGR1-207ENST00000489206 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
SYNGR1-207ENST00000489206 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
SYNGR1-207ENST00000489206 KRTAP19-8Q3LI54 63 aa8.16□□□□□ -1.1
SYNGR1-207ENST00000489206 LUZP6Q538Z0 58 aa8.05□□□□□ -1.12
SYNGR1-207ENST00000489206 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.12
SYNGR1-207ENST00000489206 MT1BP07438 61 aa7.99□□□□□ -1.13
SYNGR1-207ENST00000489206 SPRR5A0A1B0GTR4 108 aa7.96□□□□□ -1.14
SYNGR1-207ENST00000489206 LCE3AQ5TA76 89 aa7.95□□□□□ -1.14
SYNGR1-207ENST00000489206 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
SYNGR1-207ENST00000489206 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
SYNGR1-207ENST00000489206 MT1XP80297 61 aa7.9□□□□□ -1.15
SYNGR1-207ENST00000489206 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
SYNGR1-207ENST00000489206 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
SYNGR1-207ENST00000489206 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.15
SYNGR1-207ENST00000489206 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
SYNGR1-207ENST00000489206 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
SYNGR1-207ENST00000489206 USH2AO75445 5202 aa7.64□□□□□ -1.19
SYNGR1-207ENST00000489206 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
SYNGR1-207ENST00000489206 LCE2BO14633 110 aa7.62□□□□□ -1.19
SYNGR1-207ENST00000489206 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
SYNGR1-207ENST00000489206 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
SYNGR1-207ENST00000489206 CRCT1Q9UGL9 99 aa7.59□□□□□ -1.19
SYNGR1-207ENST00000489206 SSPOA2VEC9 5147 aa7.54□□□□□ -1.2
SYNGR1-207ENST00000489206 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
SYNGR1-207ENST00000489206 KRTAP19-5Q3LI72 72 aa7.3□□□□□ -1.24
SYNGR1-207ENST00000489206 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
SYNGR1-207ENST00000489206 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
SYNGR1-207ENST00000489206 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
SYNGR1-207ENST00000489206 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
SYNGR1-207ENST00000489206 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
SYNGR1-207ENST00000489206 KRTAP19-4Q3LI73 84 aa7.04□□□□□ -1.28
SYNGR1-207ENST00000489206 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
SYNGR1-207ENST00000489206 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
SYNGR1-207ENST00000489206 KMT2DO14686 5537 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms