RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
VTI1A-206ENST00000489142 MT1BP07438 61 aa6.3□□□□□ -1.4
VTI1A-206ENST00000489142 ATP5EP2Q5VTU8 51 aa6.3□□□□□ -1.4
VTI1A-206ENST00000489142 Q5VV11 94 aa6.28□□□□□ -1.4
VTI1A-206ENST00000489142 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
VTI1A-206ENST00000489142 H0Y9P7 68 aa6.27□□□□□ -1.41
VTI1A-206ENST00000489142 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
VTI1A-206ENST00000489142 UQCRQO14949 82 aa6.25□□□□□ -1.41
VTI1A-206ENST00000489142 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
VTI1A-206ENST00000489142 A6NN06 94 aa6.23□□□□□ -1.41
VTI1A-206ENST00000489142 J3QR89 54 aa6.23□□□□□ -1.41
VTI1A-206ENST00000489142 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
VTI1A-206ENST00000489142 ATOX1O00244 68 aa6.21□□□□□ -1.42
VTI1A-206ENST00000489142 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
VTI1A-206ENST00000489142 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
VTI1A-206ENST00000489142 NDUFC1O43677 76 aa6.16□□□□□ -1.42
VTI1A-206ENST00000489142 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
VTI1A-206ENST00000489142 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
VTI1A-206ENST00000489142 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
VTI1A-206ENST00000489142 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
VTI1A-206ENST00000489142 IMUPQ9GZP8 106 aa6.14□□□□□ -1.43
VTI1A-206ENST00000489142 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
VTI1A-206ENST00000489142 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
VTI1A-206ENST00000489142 A8MUN3 132 aa6.09□□□□□ -1.43
VTI1A-206ENST00000489142 MP68P56378 58 aa6.09□□□□□ -1.43
VTI1A-206ENST00000489142 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
VTI1A-206ENST00000489142 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
VTI1A-206ENST00000489142 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
VTI1A-206ENST00000489142 H0YAA0 97 aa6.07□□□□□ -1.44
VTI1A-206ENST00000489142 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
VTI1A-206ENST00000489142 K7ERU9 68 aa6.05□□□□□ -1.44
VTI1A-206ENST00000489142 SEC61GP60059 68 aa6.02□□□□□ -1.45
VTI1A-206ENST00000489142 H3BPC8 53 aa5.96□□□□□ -1.46
VTI1A-206ENST00000489142 P0C880 135 aa5.96□□□□□ -1.46
VTI1A-206ENST00000489142 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
VTI1A-206ENST00000489142 DMAC1Q96GE9 116 aa5.95□□□□□ -1.46
VTI1A-206ENST00000489142 NEBP20929 6669 aa5.92□□□□□ -1.46
VTI1A-206ENST00000489142 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
VTI1A-206ENST00000489142 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
VTI1A-206ENST00000489142 MT1XP80297 61 aa5.91□□□□□ -1.46
VTI1A-206ENST00000489142 R4GN34 69 aa5.91□□□□□ -1.46
VTI1A-206ENST00000489142 M0QZ58 72 aa5.89□□□□□ -1.47
VTI1A-206ENST00000489142 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
VTI1A-206ENST00000489142 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
VTI1A-206ENST00000489142 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
VTI1A-206ENST00000489142 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
VTI1A-206ENST00000489142 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
VTI1A-206ENST00000489142 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
VTI1A-206ENST00000489142 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
VTI1A-206ENST00000489142 KMT2DO14686 5537 aa5.82□□□□□ -1.48
VTI1A-206ENST00000489142 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
VTI1A-206ENST00000489142 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
VTI1A-206ENST00000489142 V9GYY9 64 aa5.8□□□□□ -1.48
VTI1A-206ENST00000489142 ACYP2P14621 99 aa5.78□□□□□ -1.48
VTI1A-206ENST00000489142 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
VTI1A-206ENST00000489142 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
VTI1A-206ENST00000489142 SNURFQ9Y675 71 aa5.74□□□□□ -1.49
VTI1A-206ENST00000489142 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
VTI1A-206ENST00000489142 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
VTI1A-206ENST00000489142 SPRR2EP22531 72 aa5.71□□□□□ -1.5
VTI1A-206ENST00000489142 SPRR2BP35325 72 aa5.71□□□□□ -1.5
VTI1A-206ENST00000489142 SPRR2AP35326 72 aa5.71□□□□□ -1.5
VTI1A-206ENST00000489142 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
VTI1A-206ENST00000489142 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
VTI1A-206ENST00000489142 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
VTI1A-206ENST00000489142 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
VTI1A-206ENST00000489142 RPS28P62857 69 aaKnown RBP5.66□□□□□ -1.5
VTI1A-206ENST00000489142 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
VTI1A-206ENST00000489142 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
VTI1A-206ENST00000489142 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
VTI1A-206ENST00000489142 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
VTI1A-206ENST00000489142 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
VTI1A-206ENST00000489142 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
VTI1A-206ENST00000489142 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
VTI1A-206ENST00000489142 COX7CP15954 63 aa5.57□□□□□ -1.52
VTI1A-206ENST00000489142 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
VTI1A-206ENST00000489142 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
VTI1A-206ENST00000489142 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
VTI1A-206ENST00000489142 SPRR2DP22532 72 aa5.51□□□□□ -1.53
VTI1A-206ENST00000489142 COA5Q86WW8 74 aa5.49□□□□□ -1.53
VTI1A-206ENST00000489142 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
VTI1A-206ENST00000489142 H3BS24 57 aa5.43□□□□□ -1.54
VTI1A-206ENST00000489142 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
VTI1A-206ENST00000489142 KRTAP2-2Q9BYT5 123 aa5.42□□□□□ -1.54
VTI1A-206ENST00000489142 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
VTI1A-206ENST00000489142 A0A0D9SG42 100 aa5.41□□□□□ -1.54
VTI1A-206ENST00000489142 H7BZZ5 65 aa5.41□□□□□ -1.54
VTI1A-206ENST00000489142 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
VTI1A-206ENST00000489142 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
VTI1A-206ENST00000489142 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
VTI1A-206ENST00000489142 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
VTI1A-206ENST00000489142 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
VTI1A-206ENST00000489142 A0A1B0GU33 70 aa5.3□□□□□ -1.56
VTI1A-206ENST00000489142 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
VTI1A-206ENST00000489142 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
VTI1A-206ENST00000489142 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
VTI1A-206ENST00000489142 TMEM258P61165 79 aa5.27□□□□□ -1.57
VTI1A-206ENST00000489142 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
VTI1A-206ENST00000489142 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
VTI1A-206ENST00000489142 MT1EP04732 61 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms