RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 A8MUU9 505 aa5.92□□□□□ -1.46
COL21A1-211ENST00000488912 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
COL21A1-211ENST00000488912 LPAP08519 4548 aa5.9□□□□□ -1.46
COL21A1-211ENST00000488912 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
COL21A1-211ENST00000488912 XP32Q5T750 250 aa5.9□□□□□ -1.46
COL21A1-211ENST00000488912 HERC1Q15751 4861 aa5.89□□□□□ -1.47
COL21A1-211ENST00000488912 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
COL21A1-211ENST00000488912 LRP2P98164 4655 aa5.85□□□□□ -1.47
COL21A1-211ENST00000488912 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
COL21A1-211ENST00000488912 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
COL21A1-211ENST00000488912 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
COL21A1-211ENST00000488912 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
COL21A1-211ENST00000488912 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
COL21A1-211ENST00000488912 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
COL21A1-211ENST00000488912 ACYP2P14621 99 aa5.76□□□□□ -1.49
COL21A1-211ENST00000488912 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
COL21A1-211ENST00000488912 A0A1B0GU69 56 aa5.73□□□□□ -1.49
COL21A1-211ENST00000488912 UQCR11O14957 56 aa5.73□□□□□ -1.49
COL21A1-211ENST00000488912 DMAC1Q96GE9 116 aa5.71□□□□□ -1.5
COL21A1-211ENST00000488912 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
COL21A1-211ENST00000488912 MUC17Q685J3 4493 aa5.65□□□□□ -1.5
COL21A1-211ENST00000488912 ROMO1P60602 79 aa5.64□□□□□ -1.51
COL21A1-211ENST00000488912 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
COL21A1-211ENST00000488912 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
COL21A1-211ENST00000488912 MUC2Q02817 5179 aa5.57□□□□□ -1.52
COL21A1-211ENST00000488912 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
COL21A1-211ENST00000488912 KRTAP3-1Q9BYR8 98 aa5.57□□□□□ -1.52
COL21A1-211ENST00000488912 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
COL21A1-211ENST00000488912 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
COL21A1-211ENST00000488912 P0C880 135 aa5.48□□□□□ -1.53
COL21A1-211ENST00000488912 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
COL21A1-211ENST00000488912 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
COL21A1-211ENST00000488912 H0YAA0 97 aa5.42□□□□□ -1.54
COL21A1-211ENST00000488912 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.54
COL21A1-211ENST00000488912 KRTAP3-2Q9BYR7 98 aa5.4□□□□□ -1.54
COL21A1-211ENST00000488912 S4R3F8 94 aa5.4□□□□□ -1.54
COL21A1-211ENST00000488912 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
COL21A1-211ENST00000488912 LCE2CQ5TA81 110 aa5.34□□□□□ -1.56
COL21A1-211ENST00000488912 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
COL21A1-211ENST00000488912 A0A1B0GU33 70 aa5.31□□□□□ -1.56
COL21A1-211ENST00000488912 K7ERS5 55 aa5.26□□□□□ -1.57
COL21A1-211ENST00000488912 A0A0A0MQY5 61 aa5.25□□□□□ -1.57
COL21A1-211ENST00000488912 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
COL21A1-211ENST00000488912 CRIPTQ9P021 101 aa5.25□□□□□ -1.57
COL21A1-211ENST00000488912 MT1HP80294 61 aa5.23□□□□□ -1.57
COL21A1-211ENST00000488912 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
COL21A1-211ENST00000488912 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
COL21A1-211ENST00000488912 M0R2T5 61 aa5.17□□□□□ -1.58
COL21A1-211ENST00000488912 KRTAP10-6P60371 365 aaPredicted RBP5.15□□□□□ -1.59
COL21A1-211ENST00000488912 LCE2AQ5TA79 106 aaPredicted RBP5.07□□□□□ -1.6
COL21A1-211ENST00000488912 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
COL21A1-211ENST00000488912 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
COL21A1-211ENST00000488912 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
COL21A1-211ENST00000488912 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
COL21A1-211ENST00000488912 MT2AP02795 61 aa5.01□□□□□ -1.61
COL21A1-211ENST00000488912 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
COL21A1-211ENST00000488912 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
COL21A1-211ENST00000488912 MT1FP04733 61 aa4.99□□□□□ -1.61
COL21A1-211ENST00000488912 R4GN34 69 aa4.97□□□□□ -1.61
COL21A1-211ENST00000488912 M0QZ58 72 aa4.97□□□□□ -1.61
COL21A1-211ENST00000488912 KRTAP10-10P60014 251 aa4.96□□□□□ -1.61
COL21A1-211ENST00000488912 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
COL21A1-211ENST00000488912 A0A0D9SG42 100 aa4.95□□□□□ -1.62
COL21A1-211ENST00000488912 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
COL21A1-211ENST00000488912 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
COL21A1-211ENST00000488912 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
COL21A1-211ENST00000488912 KRTAP9-3Q9BYQ3 159 aa4.85□□□□□ -1.63
COL21A1-211ENST00000488912 KRTAP12-1P59990 96 aa4.84□□□□□ -1.64
COL21A1-211ENST00000488912 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
COL21A1-211ENST00000488912 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
COL21A1-211ENST00000488912 LCE2BO14633 110 aa4.73□□□□□ -1.65
COL21A1-211ENST00000488912 MT1BP07438 61 aa4.71□□□□□ -1.66
COL21A1-211ENST00000488912 USH2AO75445 5202 aa4.66□□□□□ -1.66
COL21A1-211ENST00000488912 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.66
COL21A1-211ENST00000488912 MT1XP80297 61 aa4.55□□□□□ -1.68
COL21A1-211ENST00000488912 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
COL21A1-211ENST00000488912 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
COL21A1-211ENST00000488912 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
COL21A1-211ENST00000488912 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
COL21A1-211ENST00000488912 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
COL21A1-211ENST00000488912 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
COL21A1-211ENST00000488912 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
COL21A1-211ENST00000488912 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
COL21A1-211ENST00000488912 TNP1P09430 55 aa4.4□□□□□ -1.7
COL21A1-211ENST00000488912 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.7
COL21A1-211ENST00000488912 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
COL21A1-211ENST00000488912 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
COL21A1-211ENST00000488912 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
COL21A1-211ENST00000488912 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
COL21A1-211ENST00000488912 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
COL21A1-211ENST00000488912 KMT2DO14686 5537 aa4.28□□□□□ -1.72
COL21A1-211ENST00000488912 INE1O15225 51 aa4.28□□□□□ -1.72
COL21A1-211ENST00000488912 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
COL21A1-211ENST00000488912 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
COL21A1-211ENST00000488912 KRTAP9-6A0A140TA67 174 aa4.25□□□□□ -1.73
COL21A1-211ENST00000488912 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
COL21A1-211ENST00000488912 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
COL21A1-211ENST00000488912 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
COL21A1-211ENST00000488912 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
COL21A1-211ENST00000488912 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms