RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
ABCA2-219ENST00000488535 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
ABCA2-219ENST00000488535 RYR2Q92736 4967 aa6.99□□□□□ -1.29
ABCA2-219ENST00000488535 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
ABCA2-219ENST00000488535 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
ABCA2-219ENST00000488535 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
ABCA2-219ENST00000488535 TPRXLQ17RH7 258 aa6.96□□□□□ -1.29
ABCA2-219ENST00000488535 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
ABCA2-219ENST00000488535 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
ABCA2-219ENST00000488535 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
ABCA2-219ENST00000488535 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
ABCA2-219ENST00000488535 Q5VSD8 79 aa6.89□□□□□ -1.31
ABCA2-219ENST00000488535 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
ABCA2-219ENST00000488535 RYR1P21817 5038 aa6.84□□□□□ -1.31
ABCA2-219ENST00000488535 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
ABCA2-219ENST00000488535 S4R3F8 94 aa6.77□□□□□ -1.33
ABCA2-219ENST00000488535 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
ABCA2-219ENST00000488535 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
ABCA2-219ENST00000488535 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
ABCA2-219ENST00000488535 HSPG2P98160 4391 aa6.71□□□□□ -1.34
ABCA2-219ENST00000488535 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
ABCA2-219ENST00000488535 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
ABCA2-219ENST00000488535 KRTAP10-8P60410 259 aa6.67□□□□□ -1.34
ABCA2-219ENST00000488535 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
ABCA2-219ENST00000488535 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
ABCA2-219ENST00000488535 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
ABCA2-219ENST00000488535 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
ABCA2-219ENST00000488535 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
ABCA2-219ENST00000488535 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
ABCA2-219ENST00000488535 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
ABCA2-219ENST00000488535 LPAP08519 4548 aa6.54□□□□□ -1.36
ABCA2-219ENST00000488535 MUC2Q02817 5179 aa6.53□□□□□ -1.36
ABCA2-219ENST00000488535 LRP2P98164 4655 aa6.52□□□□□ -1.37
ABCA2-219ENST00000488535 HERC2O95714 4834 aa6.51□□□□□ -1.37
ABCA2-219ENST00000488535 TNXBP22105 4242 aa6.51□□□□□ -1.37
ABCA2-219ENST00000488535 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
ABCA2-219ENST00000488535 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
ABCA2-219ENST00000488535 M0QZ58 72 aa6.49□□□□□ -1.37
ABCA2-219ENST00000488535 J3QL48 77 aa6.48□□□□□ -1.37
ABCA2-219ENST00000488535 XP32Q5T750 250 aa6.48□□□□□ -1.37
ABCA2-219ENST00000488535 HERC1Q15751 4861 aa6.46□□□□□ -1.38
ABCA2-219ENST00000488535 R4GN34 69 aa6.43□□□□□ -1.38
ABCA2-219ENST00000488535 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
ABCA2-219ENST00000488535 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
ABCA2-219ENST00000488535 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
ABCA2-219ENST00000488535 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
ABCA2-219ENST00000488535 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
ABCA2-219ENST00000488535 BIRC6Q9NR09 4857 aa6.21□□□□□ -1.42
ABCA2-219ENST00000488535 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
ABCA2-219ENST00000488535 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
ABCA2-219ENST00000488535 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
ABCA2-219ENST00000488535 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
ABCA2-219ENST00000488535 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
ABCA2-219ENST00000488535 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
ABCA2-219ENST00000488535 TNP1P09430 55 aa5.85□□□□□ -1.47
ABCA2-219ENST00000488535 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
ABCA2-219ENST00000488535 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
ABCA2-219ENST00000488535 M0R2T5 61 aa5.8□□□□□ -1.48
ABCA2-219ENST00000488535 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
ABCA2-219ENST00000488535 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
ABCA2-219ENST00000488535 USH2AO75445 5202 aa5.61□□□□□ -1.51
ABCA2-219ENST00000488535 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
ABCA2-219ENST00000488535 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
ABCA2-219ENST00000488535 KRTAP10-10P60014 251 aa5.49□□□□□ -1.53
ABCA2-219ENST00000488535 MT1HP80294 61 aa5.48□□□□□ -1.53
ABCA2-219ENST00000488535 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
ABCA2-219ENST00000488535 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
ABCA2-219ENST00000488535 MT1FP04733 61 aa5.35□□□□□ -1.55
ABCA2-219ENST00000488535 MT2AP02795 61 aa5.34□□□□□ -1.55
ABCA2-219ENST00000488535 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
ABCA2-219ENST00000488535 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
ABCA2-219ENST00000488535 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
ABCA2-219ENST00000488535 INE1O15225 51 aa5.25□□□□□ -1.57
ABCA2-219ENST00000488535 KMT2DO14686 5537 aa5.25□□□□□ -1.57
ABCA2-219ENST00000488535 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
ABCA2-219ENST00000488535 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
ABCA2-219ENST00000488535 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
ABCA2-219ENST00000488535 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
ABCA2-219ENST00000488535 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
ABCA2-219ENST00000488535 MT1BP07438 61 aa5.04□□□□□ -1.6
ABCA2-219ENST00000488535 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
ABCA2-219ENST00000488535 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
ABCA2-219ENST00000488535 LCE2BO14633 110 aa4.96□□□□□ -1.62
ABCA2-219ENST00000488535 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
ABCA2-219ENST00000488535 MT1XP80297 61 aa4.95□□□□□ -1.62
ABCA2-219ENST00000488535 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
ABCA2-219ENST00000488535 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
ABCA2-219ENST00000488535 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
ABCA2-219ENST00000488535 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
ABCA2-219ENST00000488535 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
ABCA2-219ENST00000488535 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
ABCA2-219ENST00000488535 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
ABCA2-219ENST00000488535 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
ABCA2-219ENST00000488535 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
ABCA2-219ENST00000488535 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
ABCA2-219ENST00000488535 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
ABCA2-219ENST00000488535 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
ABCA2-219ENST00000488535 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
ABCA2-219ENST00000488535 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.66
ABCA2-219ENST00000488535 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms