RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
SKA1-204ENST00000488454 FAM236BA0A1B0GV22 79 aa5.23□□□□□ -1.57
SKA1-204ENST00000488454 H0Y9P7 68 aa5.23□□□□□ -1.57
SKA1-204ENST00000488454 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
SKA1-204ENST00000488454 LOC101927531A0A1B0GV80 90 aa5.22□□□□□ -1.57
SKA1-204ENST00000488454 MP68P56378 58 aa5.22□□□□□ -1.57
SKA1-204ENST00000488454 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
SKA1-204ENST00000488454 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
SKA1-204ENST00000488454 SMIM20Q8N5G0 67 aa5.21□□□□□ -1.58
SKA1-204ENST00000488454 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
SKA1-204ENST00000488454 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
SKA1-204ENST00000488454 CYP4F30PQ9H0H9 118 aa5.19□□□□□ -1.58
SKA1-204ENST00000488454 LINC00208Q96KT6 92 aa5.18□□□□□ -1.58
SKA1-204ENST00000488454 TRAV7A0A075B6U4 112 aa5.17□□□□□ -1.58
SKA1-204ENST00000488454 H3BPC8 53 aa5.17□□□□□ -1.58
SKA1-204ENST00000488454 M0R2T5 61 aa5.16□□□□□ -1.58
SKA1-204ENST00000488454 C4orf26Q17RF5 130 aa5.16□□□□□ -1.58
SKA1-204ENST00000488454 MT1HP80294 61 aa5.14□□□□□ -1.59
SKA1-204ENST00000488454 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
SKA1-204ENST00000488454 SERP2Q8N6R1 65 aa5.09□□□□□ -1.59
SKA1-204ENST00000488454 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
SKA1-204ENST00000488454 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
SKA1-204ENST00000488454 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
SKA1-204ENST00000488454 C20orf197Q8N268 126 aa5.03□□□□□ -1.6
SKA1-204ENST00000488454 A8MUN3 132 aa5.02□□□□□ -1.61
SKA1-204ENST00000488454 SNURFQ9Y675 71 aa5.02□□□□□ -1.61
SKA1-204ENST00000488454 COX7CP15954 63 aa5.01□□□□□ -1.61
SKA1-204ENST00000488454 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
SKA1-204ENST00000488454 ANAPC13Q9BS18 74 aa5.01□□□□□ -1.61
SKA1-204ENST00000488454 S4R3F8 94 aa5.01□□□□□ -1.61
SKA1-204ENST00000488454 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
SKA1-204ENST00000488454 LCA10Q71F78 164 aa4.96□□□□□ -1.62
SKA1-204ENST00000488454 NDUFC1O43677 76 aa4.94□□□□□ -1.62
SKA1-204ENST00000488454 DMAC1Q96GE9 116 aa4.94□□□□□ -1.62
SKA1-204ENST00000488454 ACYP2P14621 99 aa4.93□□□□□ -1.62
SKA1-204ENST00000488454 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
SKA1-204ENST00000488454 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SKA1-204ENST00000488454 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
SKA1-204ENST00000488454 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
SKA1-204ENST00000488454 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
SKA1-204ENST00000488454 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
SKA1-204ENST00000488454 MT2AP02795 61 aa4.86□□□□□ -1.63
SKA1-204ENST00000488454 H7BZZ5 65 aa4.85□□□□□ -1.63
SKA1-204ENST00000488454 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
SKA1-204ENST00000488454 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
SKA1-204ENST00000488454 MT1FP04733 61 aa4.82□□□□□ -1.64
SKA1-204ENST00000488454 H0YAA0 97 aa4.77□□□□□ -1.65
SKA1-204ENST00000488454 COA5Q86WW8 74 aa4.77□□□□□ -1.65
SKA1-204ENST00000488454 ATP5EP56381 51 aaPredicted RBP4.75□□□□□ -1.65
SKA1-204ENST00000488454 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
SKA1-204ENST00000488454 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
SKA1-204ENST00000488454 TMEM258P61165 79 aa4.71□□□□□ -1.66
SKA1-204ENST00000488454 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
SKA1-204ENST00000488454 MT3P25713 68 aa4.69□□□□□ -1.66
SKA1-204ENST00000488454 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
SKA1-204ENST00000488454 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SKA1-204ENST00000488454 SEC61GP60059 68 aa4.65□□□□□ -1.67
SKA1-204ENST00000488454 P0C880 135 aa4.64□□□□□ -1.67
SKA1-204ENST00000488454 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
SKA1-204ENST00000488454 SERP1Q9Y6X1 66 aa4.63□□□□□ -1.67
SKA1-204ENST00000488454 R4GN34 69 aa4.63□□□□□ -1.67
SKA1-204ENST00000488454 USH2AO75445 5202 aa4.62□□□□□ -1.67
SKA1-204ENST00000488454 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
SKA1-204ENST00000488454 M0QZ58 72 aa4.59□□□□□ -1.67
SKA1-204ENST00000488454 Q5VV11 94 aa4.57□□□□□ -1.68
SKA1-204ENST00000488454 NEBP20929 6669 aa4.57□□□□□ -1.68
SKA1-204ENST00000488454 A0A1B0GU69 56 aa4.56□□□□□ -1.68
SKA1-204ENST00000488454 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
SKA1-204ENST00000488454 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
SKA1-204ENST00000488454 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
SKA1-204ENST00000488454 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
SKA1-204ENST00000488454 A0A1B0GU33 70 aa4.5□□□□□ -1.69
SKA1-204ENST00000488454 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
SKA1-204ENST00000488454 MT1BP07438 61 aa4.49□□□□□ -1.69
SKA1-204ENST00000488454 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
SKA1-204ENST00000488454 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
SKA1-204ENST00000488454 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
SKA1-204ENST00000488454 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
SKA1-204ENST00000488454 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
SKA1-204ENST00000488454 V9GYY9 64 aa4.45□□□□□ -1.7
SKA1-204ENST00000488454 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
SKA1-204ENST00000488454 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
SKA1-204ENST00000488454 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SKA1-204ENST00000488454 A6NN06 94 aa4.4□□□□□ -1.71
SKA1-204ENST00000488454 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
SKA1-204ENST00000488454 A0A0D9SG42 100 aa4.39□□□□□ -1.71
SKA1-204ENST00000488454 Q1T7F1 81 aa4.39□□□□□ -1.71
SKA1-204ENST00000488454 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
SKA1-204ENST00000488454 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
SKA1-204ENST00000488454 UQCR11O14957 56 aa4.36□□□□□ -1.71
SKA1-204ENST00000488454 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
SKA1-204ENST00000488454 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
SKA1-204ENST00000488454 PSPHP1O15172 72 aa4.34□□□□□ -1.71
SKA1-204ENST00000488454 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
SKA1-204ENST00000488454 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
SKA1-204ENST00000488454 A8MU10 97 aa4.3□□□□□ -1.72
SKA1-204ENST00000488454 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
SKA1-204ENST00000488454 MT1XP80297 61 aa4.28□□□□□ -1.72
SKA1-204ENST00000488454 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
SKA1-204ENST00000488454 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms