RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
RAPGEF3-211ENST00000488250 A8MU10 97 aa8.31□□□□□ -1.08
RAPGEF3-211ENST00000488250 J3QL48 77 aa8.22□□□□□ -1.09
RAPGEF3-211ENST00000488250 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
RAPGEF3-211ENST00000488250 SEC61GP60059 68 aa8.21□□□□□ -1.1
RAPGEF3-211ENST00000488250 UQCR11O14957 56 aa8.19□□□□□ -1.1
RAPGEF3-211ENST00000488250 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
RAPGEF3-211ENST00000488250 HERC1Q15751 4861 aa8.13□□□□□ -1.11
RAPGEF3-211ENST00000488250 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
RAPGEF3-211ENST00000488250 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
RAPGEF3-211ENST00000488250 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
RAPGEF3-211ENST00000488250 LRP2P98164 4655 aa8.08□□□□□ -1.12
RAPGEF3-211ENST00000488250 S4R3F8 94 aa8.07□□□□□ -1.12
RAPGEF3-211ENST00000488250 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
RAPGEF3-211ENST00000488250 A6NN06 94 aa8.05□□□□□ -1.12
RAPGEF3-211ENST00000488250 A0A1B0GU33 70 aa8.02□□□□□ -1.13
RAPGEF3-211ENST00000488250 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
RAPGEF3-211ENST00000488250 LPAP08519 4548 aa8.01□□□□□ -1.13
RAPGEF3-211ENST00000488250 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
RAPGEF3-211ENST00000488250 H0YAA0 97 aa7.96□□□□□ -1.13
RAPGEF3-211ENST00000488250 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
RAPGEF3-211ENST00000488250 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
RAPGEF3-211ENST00000488250 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
RAPGEF3-211ENST00000488250 KTN1-AS1Q86SY8 53 aa7.9□□□□□ -1.14
RAPGEF3-211ENST00000488250 CSAG1Q6PB30 78 aa7.85□□□□□ -1.15
RAPGEF3-211ENST00000488250 KRTAP4-1Q9BYQ7 146 aa7.82□□□□□ -1.16
RAPGEF3-211ENST00000488250 MUC17Q685J3 4493 aa7.81□□□□□ -1.16
RAPGEF3-211ENST00000488250 P0C880 135 aa7.77□□□□□ -1.17
RAPGEF3-211ENST00000488250 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
RAPGEF3-211ENST00000488250 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
RAPGEF3-211ENST00000488250 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
RAPGEF3-211ENST00000488250 K7ERS5 55 aa7.67□□□□□ -1.18
RAPGEF3-211ENST00000488250 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
RAPGEF3-211ENST00000488250 M0QZ58 72 aa7.62□□□□□ -1.19
RAPGEF3-211ENST00000488250 MUC2Q02817 5179 aa7.59□□□□□ -1.19
RAPGEF3-211ENST00000488250 A0A0D9SG42 100 aa7.58□□□□□ -1.2
RAPGEF3-211ENST00000488250 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
RAPGEF3-211ENST00000488250 RNF213Q63HN8 5207 aa7.53□□□□□ -1.2
RAPGEF3-211ENST00000488250 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
RAPGEF3-211ENST00000488250 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
RAPGEF3-211ENST00000488250 FLGP20930 4061 aaPredicted RBP7.47□□□□□ -1.21
RAPGEF3-211ENST00000488250 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
RAPGEF3-211ENST00000488250 KRTAP12-2P59991 146 aa7.46□□□□□ -1.21
RAPGEF3-211ENST00000488250 R4GN34 69 aa7.44□□□□□ -1.22
RAPGEF3-211ENST00000488250 ROMO1P60602 79 aa7.44□□□□□ -1.22
RAPGEF3-211ENST00000488250 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
RAPGEF3-211ENST00000488250 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
RAPGEF3-211ENST00000488250 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
RAPGEF3-211ENST00000488250 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
RAPGEF3-211ENST00000488250 LINC01554Q52M75 96 aa7.31□□□□□ -1.24
RAPGEF3-211ENST00000488250 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
RAPGEF3-211ENST00000488250 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
RAPGEF3-211ENST00000488250 MT1HP80294 61 aa7.19□□□□□ -1.26
RAPGEF3-211ENST00000488250 H3BS24 57 aa7.15□□□□□ -1.27
RAPGEF3-211ENST00000488250 M0R2T5 61 aa7.11□□□□□ -1.27
RAPGEF3-211ENST00000488250 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
RAPGEF3-211ENST00000488250 C10orf95Q9H7T3 257 aa7.05□□□□□ -1.28
RAPGEF3-211ENST00000488250 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
RAPGEF3-211ENST00000488250 MT2AP02795 61 aa6.99□□□□□ -1.29
RAPGEF3-211ENST00000488250 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
RAPGEF3-211ENST00000488250 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
RAPGEF3-211ENST00000488250 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
RAPGEF3-211ENST00000488250 MT1FP04733 61 aa6.95□□□□□ -1.3
RAPGEF3-211ENST00000488250 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
RAPGEF3-211ENST00000488250 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
RAPGEF3-211ENST00000488250 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
RAPGEF3-211ENST00000488250 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
RAPGEF3-211ENST00000488250 TNP1P09430 55 aa6.75□□□□□ -1.33
RAPGEF3-211ENST00000488250 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
RAPGEF3-211ENST00000488250 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
RAPGEF3-211ENST00000488250 MT1BP07438 61 aa6.68□□□□□ -1.34
RAPGEF3-211ENST00000488250 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
RAPGEF3-211ENST00000488250 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
RAPGEF3-211ENST00000488250 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
RAPGEF3-211ENST00000488250 MT1XP80297 61 aa6.54□□□□□ -1.36
RAPGEF3-211ENST00000488250 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
RAPGEF3-211ENST00000488250 LCE2BO14633 110 aa6.46□□□□□ -1.37
RAPGEF3-211ENST00000488250 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
RAPGEF3-211ENST00000488250 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
RAPGEF3-211ENST00000488250 LCE3AQ5TA76 89 aa6.4□□□□□ -1.39
RAPGEF3-211ENST00000488250 USH2AO75445 5202 aa6.36□□□□□ -1.39
RAPGEF3-211ENST00000488250 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
RAPGEF3-211ENST00000488250 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
RAPGEF3-211ENST00000488250 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
RAPGEF3-211ENST00000488250 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
RAPGEF3-211ENST00000488250 FSIP2Q5CZC0 6907 aa6.3□□□□□ -1.4
RAPGEF3-211ENST00000488250 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
RAPGEF3-211ENST00000488250 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
RAPGEF3-211ENST00000488250 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
RAPGEF3-211ENST00000488250 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
RAPGEF3-211ENST00000488250 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
RAPGEF3-211ENST00000488250 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
RAPGEF3-211ENST00000488250 KRTAP12-3P60328 96 aa6.15□□□□□ -1.43
RAPGEF3-211ENST00000488250 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
RAPGEF3-211ENST00000488250 LUZP6Q538Z0 58 aa6.09□□□□□ -1.44
RAPGEF3-211ENST00000488250 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
RAPGEF3-211ENST00000488250 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
RAPGEF3-211ENST00000488250 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
RAPGEF3-211ENST00000488250 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
RAPGEF3-211ENST00000488250 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms