RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 KRTAP16-1A8MUX0 517 aa1.49□□□□□ -2.17
C9orf72-205ENST00000488117 KRTAP13-3Q3SY46 172 aa1.49□□□□□ -2.17
C9orf72-205ENST00000488117 A0A1B0GVY2 172 aa1.49□□□□□ -2.17
C9orf72-205ENST00000488117 HERC1Q15751 4861 aa1.48□□□□□ -2.17
C9orf72-205ENST00000488117 UQCR11O14957 56 aa1.48□□□□□ -2.17
C9orf72-205ENST00000488117 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
C9orf72-205ENST00000488117 Q5VSD8 79 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 Q8N1X5 172 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 COL6A5A8TX70 2615 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 MIR22HGQ0VDD5 57 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 A8MUU9 505 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 C20orf166-AS1Q96NR2 134 aa1.47□□□□□ -2.17
C9orf72-205ENST00000488117 LCE1DQ5T752 114 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 K7ERS5 55 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 NOTCH1P46531 2555 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 SPINK7P58062 85 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 KTN1-AS1Q86SY8 53 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 NBEAL1Q6ZS30 2694 aa1.46□□□□□ -2.18
C9orf72-205ENST00000488117 MGAM2Q2M2H8 2515 aa1.45□□□□□ -2.18
C9orf72-205ENST00000488117 LCA10Q71F78 164 aa1.45□□□□□ -2.18
C9orf72-205ENST00000488117 LRP1BQ9NZR2 4599 aa1.44□□□□□ -2.18
C9orf72-205ENST00000488117 COX6B2Q6YFQ2 88 aa1.44□□□□□ -2.18
C9orf72-205ENST00000488117 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
C9orf72-205ENST00000488117 RPL37P61927 97 aaKnown RBP1.43□□□□□ -2.18
C9orf72-205ENST00000488117 KRTAP19-1Q8IUB9 90 aa1.43□□□□□ -2.18
C9orf72-205ENST00000488117 KRTAP4-11Q9BYQ6 195 aa1.43□□□□□ -2.18
C9orf72-205ENST00000488117 A0A1B0GU33 70 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 A6NN06 94 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
C9orf72-205ENST00000488117 S4R3F8 94 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 RBM12B-AS1Q9P1G2 102 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 KRTAP10-8P60410 259 aa1.42□□□□□ -2.18
C9orf72-205ENST00000488117 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
C9orf72-205ENST00000488117 TENM2Q9NT68 2774 aa1.41□□□□□ -2.18
C9orf72-205ENST00000488117 A8MU10 97 aa1.41□□□□□ -2.18
C9orf72-205ENST00000488117 LCE2CQ5TA81 110 aa1.4□□□□□ -2.18
C9orf72-205ENST00000488117 FAT1Q14517 4588 aa1.4□□□□□ -2.19
C9orf72-205ENST00000488117 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
C9orf72-205ENST00000488117 SEC61BP60468 96 aaKnown RBP1.38□□□□□ -2.19
C9orf72-205ENST00000488117 TPRXLQ17RH7 258 aa1.38□□□□□ -2.19
C9orf72-205ENST00000488117 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
C9orf72-205ENST00000488117 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
C9orf72-205ENST00000488117 KRTAP3-1Q9BYR8 98 aa1.37□□□□□ -2.19
C9orf72-205ENST00000488117 LPAP08519 4548 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 H0YAA0 97 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 A0A0D9SG42 100 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 PRAC1Q96KF2 57 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 ADM2Q7Z4H4 148 aa1.36□□□□□ -2.19
C9orf72-205ENST00000488117 MT1HL1P0DM35 61 aa1.35□□□□□ -2.19
C9orf72-205ENST00000488117 ROMO1P60602 79 aa1.35□□□□□ -2.19
C9orf72-205ENST00000488117 LINC01554Q52M75 96 aa1.35□□□□□ -2.19
C9orf72-205ENST00000488117 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.19
C9orf72-205ENST00000488117 M0QZ58 72 aa1.34□□□□□ -2.19
C9orf72-205ENST00000488117 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.2
C9orf72-205ENST00000488117 MUC2Q02817 5179 aa1.34□□□□□ -2.2
C9orf72-205ENST00000488117 SPINT4Q6UDR6 99 aa1.33□□□□□ -2.2
C9orf72-205ENST00000488117 CRIPTQ9P021 101 aa1.33□□□□□ -2.2
C9orf72-205ENST00000488117 KRTAP25-1Q3LHN0 102 aa1.32□□□□□ -2.2
C9orf72-205ENST00000488117 LRP1Q07954 4544 aaKnown RBP1.32□□□□□ -2.2
C9orf72-205ENST00000488117 R4GN34 69 aa1.32□□□□□ -2.2
C9orf72-205ENST00000488117 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
C9orf72-205ENST00000488117 KRTAP10-6P60371 365 aaPredicted RBP1.31□□□□□ -2.2
C9orf72-205ENST00000488117 P0C880 135 aa1.3□□□□□ -2.2
C9orf72-205ENST00000488117 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
C9orf72-205ENST00000488117 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
C9orf72-205ENST00000488117 KRTAP13-4Q3LI77 160 aa1.28□□□□□ -2.2
C9orf72-205ENST00000488117 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
C9orf72-205ENST00000488117 CAMK2N1Q7Z7J9 78 aa1.27□□□□□ -2.21
C9orf72-205ENST00000488117 LRP2P98164 4655 aa1.27□□□□□ -2.21
C9orf72-205ENST00000488117 KRTAP12-2P59991 146 aa1.27□□□□□ -2.21
C9orf72-205ENST00000488117 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
C9orf72-205ENST00000488117 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
C9orf72-205ENST00000488117 M0R2T5 61 aa1.25□□□□□ -2.21
C9orf72-205ENST00000488117 NDUFAF8A1L188 74 aa1.24□□□□□ -2.21
C9orf72-205ENST00000488117 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
C9orf72-205ENST00000488117 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
C9orf72-205ENST00000488117 PP632Q6XCG6 107 aa1.23□□□□□ -2.21
C9orf72-205ENST00000488117 KRTAP4-1Q9BYQ7 146 aa1.22□□□□□ -2.21
C9orf72-205ENST00000488117 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
C9orf72-205ENST00000488117 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
C9orf72-205ENST00000488117 LCE5AQ5TCM9 118 aa1.22□□□□□ -2.21
C9orf72-205ENST00000488117 TNP1P09430 55 aa1.21□□□□□ -2.22
C9orf72-205ENST00000488117 DMBT1Q9UGM3 2413 aaPredicted RBP1.2□□□□□ -2.22
C9orf72-205ENST00000488117 LUZP6Q538Z0 58 aa1.18□□□□□ -2.22
C9orf72-205ENST00000488117 KRTAP10-10P60014 251 aa1.18□□□□□ -2.22
C9orf72-205ENST00000488117 KRTAP19-2Q3LHN2 52 aa1.17□□□□□ -2.22
C9orf72-205ENST00000488117 KRTAP23-1A1A580 65 aa1.16□□□□□ -2.22
C9orf72-205ENST00000488117 KRTAP15-1Q3LI76 137 aa1.16□□□□□ -2.22
C9orf72-205ENST00000488117 MT3P25713 68 aa1.16□□□□□ -2.22
C9orf72-205ENST00000488117 MT1HP80294 61 aa1.15□□□□□ -2.23
C9orf72-205ENST00000488117 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
C9orf72-205ENST00000488117 KRTAP9-3Q9BYQ3 159 aa1.15□□□□□ -2.23
C9orf72-205ENST00000488117 SPRR2GQ9BYE4 73 aa1.14□□□□□ -2.23
C9orf72-205ENST00000488117 PRO2289Q9P1D8 64 aa1.14□□□□□ -2.23
C9orf72-205ENST00000488117 MT2AP02795 61 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms