RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
LCN2-205ENST00000487719 NDUFC1O43677 76 aa4.39□□□□□ -1.71
LCN2-205ENST00000487719 LCE2BO14633 110 aa4.35□□□□□ -1.71
LCN2-205ENST00000487719 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
LCN2-205ENST00000487719 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
LCN2-205ENST00000487719 USH2AO75445 5202 aa4.32□□□□□ -1.72
LCN2-205ENST00000487719 TRAV7A0A075B6U4 112 aa4.32□□□□□ -1.72
LCN2-205ENST00000487719 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
LCN2-205ENST00000487719 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
LCN2-205ENST00000487719 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
LCN2-205ENST00000487719 H0YAA0 97 aa4.26□□□□□ -1.73
LCN2-205ENST00000487719 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
LCN2-205ENST00000487719 ACYP2P14621 99 aa4.25□□□□□ -1.73
LCN2-205ENST00000487719 C20orf197Q8N268 126 aa4.25□□□□□ -1.73
LCN2-205ENST00000487719 Q5VV11 94 aa4.24□□□□□ -1.73
LCN2-205ENST00000487719 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
LCN2-205ENST00000487719 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
LCN2-205ENST00000487719 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
LCN2-205ENST00000487719 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
LCN2-205ENST00000487719 CHKB-CPT1BH3BT56 60 aa4.21□□□□□ -1.74
LCN2-205ENST00000487719 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
LCN2-205ENST00000487719 SNURFQ9Y675 71 aa4.2□□□□□ -1.74
LCN2-205ENST00000487719 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
LCN2-205ENST00000487719 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
LCN2-205ENST00000487719 R4GN34 69 aa4.17□□□□□ -1.74
LCN2-205ENST00000487719 PCP4P48539 62 aa4.16□□□□□ -1.74
LCN2-205ENST00000487719 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
LCN2-205ENST00000487719 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
LCN2-205ENST00000487719 A6NN06 94 aa4.14□□□□□ -1.75
LCN2-205ENST00000487719 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
LCN2-205ENST00000487719 M0QZ58 72 aa4.11□□□□□ -1.75
LCN2-205ENST00000487719 MT1BP07438 61 aa4.11□□□□□ -1.75
LCN2-205ENST00000487719 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
LCN2-205ENST00000487719 COX7CP15954 63 aa4.1□□□□□ -1.75
LCN2-205ENST00000487719 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
LCN2-205ENST00000487719 P0C880 135 aa4.08□□□□□ -1.76
LCN2-205ENST00000487719 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
LCN2-205ENST00000487719 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
LCN2-205ENST00000487719 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
LCN2-205ENST00000487719 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
LCN2-205ENST00000487719 ANAPC13Q9BS18 74 aa4.05□□□□□ -1.76
LCN2-205ENST00000487719 SEC61GP60059 68 aa4.03□□□□□ -1.76
LCN2-205ENST00000487719 COA5Q86WW8 74 aa4.02□□□□□ -1.77
LCN2-205ENST00000487719 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
LCN2-205ENST00000487719 H7BZZ5 65 aa3.98□□□□□ -1.77
LCN2-205ENST00000487719 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
LCN2-205ENST00000487719 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
LCN2-205ENST00000487719 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
LCN2-205ENST00000487719 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
LCN2-205ENST00000487719 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
LCN2-205ENST00000487719 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
LCN2-205ENST00000487719 MT1XP80297 61 aa3.9□□□□□ -1.79
LCN2-205ENST00000487719 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
LCN2-205ENST00000487719 A0A1B0GU69 56 aa3.87□□□□□ -1.79
LCN2-205ENST00000487719 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
LCN2-205ENST00000487719 A0A1B0GU33 70 aa3.86□□□□□ -1.79
LCN2-205ENST00000487719 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
LCN2-205ENST00000487719 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
LCN2-205ENST00000487719 TMEM258P61165 79 aa3.83□□□□□ -1.8
LCN2-205ENST00000487719 A0A0D9SG42 100 aa3.82□□□□□ -1.8
LCN2-205ENST00000487719 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
LCN2-205ENST00000487719 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
LCN2-205ENST00000487719 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
LCN2-205ENST00000487719 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
LCN2-205ENST00000487719 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
LCN2-205ENST00000487719 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
LCN2-205ENST00000487719 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
LCN2-205ENST00000487719 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
LCN2-205ENST00000487719 KMT2DO14686 5537 aa3.75□□□□□ -1.81
LCN2-205ENST00000487719 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
LCN2-205ENST00000487719 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
LCN2-205ENST00000487719 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
LCN2-205ENST00000487719 NEBP20929 6669 aa3.71□□□□□ -1.82
LCN2-205ENST00000487719 SPRR2EP22531 72 aa3.69□□□□□ -1.82
LCN2-205ENST00000487719 SPRR2BP35325 72 aa3.69□□□□□ -1.82
LCN2-205ENST00000487719 SPRR2AP35326 72 aa3.69□□□□□ -1.82
LCN2-205ENST00000487719 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
LCN2-205ENST00000487719 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
LCN2-205ENST00000487719 UQCR11O14957 56 aa3.67□□□□□ -1.82
LCN2-205ENST00000487719 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
LCN2-205ENST00000487719 V9GYY9 64 aa3.66□□□□□ -1.82
LCN2-205ENST00000487719 A8MU10 97 aa3.65□□□□□ -1.83
LCN2-205ENST00000487719 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
LCN2-205ENST00000487719 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
LCN2-205ENST00000487719 K7ERS5 55 aa3.6□□□□□ -1.83
LCN2-205ENST00000487719 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
LCN2-205ENST00000487719 TNP1P09430 55 aa3.58□□□□□ -1.84
LCN2-205ENST00000487719 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
LCN2-205ENST00000487719 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
LCN2-205ENST00000487719 SPRR2DP22532 72 aa3.57□□□□□ -1.84
LCN2-205ENST00000487719 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
LCN2-205ENST00000487719 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
LCN2-205ENST00000487719 Q1T7F1 81 aa3.55□□□□□ -1.84
LCN2-205ENST00000487719 PSPHP1O15172 72 aa3.54□□□□□ -1.84
LCN2-205ENST00000487719 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
LCN2-205ENST00000487719 A6NED7 52 aa3.48□□□□□ -1.85
LCN2-205ENST00000487719 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
LCN2-205ENST00000487719 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
LCN2-205ENST00000487719 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
LCN2-205ENST00000487719 MT1EP04732 61 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms