RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 C8orf17Q9NRJ1 99 aa2.47□□□□□ -2.01
COL4A3-206ENST00000487633 FAM240AA0A1B0GVK7 77 aa2.46□□□□□ -2.02
COL4A3-206ENST00000487633 K7EQZ3 153 aa2.46□□□□□ -2.02
COL4A3-206ENST00000487633 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
COL4A3-206ENST00000487633 NDUFS5O43920 106 aa2.45□□□□□ -2.02
COL4A3-206ENST00000487633 MT4P47944 62 aa2.45□□□□□ -2.02
COL4A3-206ENST00000487633 PCP4P48539 62 aa2.45□□□□□ -2.02
COL4A3-206ENST00000487633 Q8N9L7 120 aa2.45□□□□□ -2.02
COL4A3-206ENST00000487633 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
COL4A3-206ENST00000487633 ACYP1P07311 99 aa2.44□□□□□ -2.02
COL4A3-206ENST00000487633 TMEM254Q8TBM7 123 aa2.44□□□□□ -2.02
COL4A3-206ENST00000487633 MRPL34Q9BQ48 92 aaKnown RBP2.44□□□□□ -2.02
COL4A3-206ENST00000487633 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 FAM236AA0A1B0GUQ0 79 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 FAM236BA0A1B0GV22 79 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 CASC2Q6XLA1 102 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 LINC00643Q86TS7 51 aa2.43□□□□□ -2.02
COL4A3-206ENST00000487633 ZCCHC13Q8WW36 166 aaKnown RBP2.43□□□□□ -2.02
COL4A3-206ENST00000487633 A0A087WVE0 104 aa2.42□□□□□ -2.02
COL4A3-206ENST00000487633 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
COL4A3-206ENST00000487633 SCGB1A1P11684 91 aa2.41□□□□□ -2.02
COL4A3-206ENST00000487633 CXCL6P80162 114 aa2.41□□□□□ -2.02
COL4A3-206ENST00000487633 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
COL4A3-206ENST00000487633 HIST1H4AP62805 103 aaKnown RBP2.4□□□□□ -2.03
COL4A3-206ENST00000487633 IGKV2D-30A0A075B6S6 120 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 IGKV2-30P06310 120 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 C5orf47Q569G3 176 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 ATP5EP2Q5VTU8 51 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
COL4A3-206ENST00000487633 CCDC179H3BU77 68 aa2.38□□□□□ -2.03
COL4A3-206ENST00000487633 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
COL4A3-206ENST00000487633 Q5W150 140 aa2.37□□□□□ -2.03
COL4A3-206ENST00000487633 ANAPC13Q9BS18 74 aa2.37□□□□□ -2.03
COL4A3-206ENST00000487633 TP53AIP1Q9HCN2 124 aa2.37□□□□□ -2.03
COL4A3-206ENST00000487633 KLKP1Q107X0 134 aa2.35□□□□□ -2.03
COL4A3-206ENST00000487633 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
COL4A3-206ENST00000487633 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
COL4A3-206ENST00000487633 ATOX1O00244 68 aa2.33□□□□□ -2.04
COL4A3-206ENST00000487633 TRAV22A0A0B4J277 110 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 UQCRQO14949 82 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 COX7CP15954 63 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 KRTAP3-1Q9BYR8 98 aa2.32□□□□□ -2.04
COL4A3-206ENST00000487633 H0Y9P7 68 aa2.31□□□□□ -2.04
COL4A3-206ENST00000487633 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
COL4A3-206ENST00000487633 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
COL4A3-206ENST00000487633 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
COL4A3-206ENST00000487633 LOC101927531A0A1B0GV80 90 aa2.3□□□□□ -2.04
COL4A3-206ENST00000487633 MP68P56378 58 aa2.3□□□□□ -2.04
COL4A3-206ENST00000487633 OCR1Q9BZK8 76 aa2.3□□□□□ -2.04
COL4A3-206ENST00000487633 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 LCA10Q71F78 164 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 C20orf197Q8N268 126 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 SNURFQ9Y675 71 aa2.29□□□□□ -2.04
COL4A3-206ENST00000487633 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
COL4A3-206ENST00000487633 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
COL4A3-206ENST00000487633 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
COL4A3-206ENST00000487633 KRTAP3-3Q9BYR6 98 aa2.27□□□□□ -2.05
COL4A3-206ENST00000487633 H7BZZ5 65 aa2.25□□□□□ -2.05
COL4A3-206ENST00000487633 SMIM20Q8N5G0 67 aa2.25□□□□□ -2.05
COL4A3-206ENST00000487633 S4R3F8 94 aa2.25□□□□□ -2.05
COL4A3-206ENST00000487633 H3BPC8 53 aa2.24□□□□□ -2.05
COL4A3-206ENST00000487633 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
COL4A3-206ENST00000487633 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
COL4A3-206ENST00000487633 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
COL4A3-206ENST00000487633 A8MUN3 132 aa2.21□□□□□ -2.06
COL4A3-206ENST00000487633 NDUFC1O43677 76 aa2.21□□□□□ -2.06
COL4A3-206ENST00000487633 TMEM258P61165 79 aa2.21□□□□□ -2.06
COL4A3-206ENST00000487633 MT1EP04732 61 aa2.2□□□□□ -2.06
COL4A3-206ENST00000487633 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
COL4A3-206ENST00000487633 CRIPTQ9P021 101 aa2.19□□□□□ -2.06
COL4A3-206ENST00000487633 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
COL4A3-206ENST00000487633 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
COL4A3-206ENST00000487633 DMAC1Q96GE9 116 aa2.17□□□□□ -2.06
COL4A3-206ENST00000487633 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
COL4A3-206ENST00000487633 ACYP2P14621 99 aa2.16□□□□□ -2.06
COL4A3-206ENST00000487633 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
COL4A3-206ENST00000487633 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
COL4A3-206ENST00000487633 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
COL4A3-206ENST00000487633 ATP5EP56381 51 aaPredicted RBP2.14□□□□□ -2.07
COL4A3-206ENST00000487633 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
COL4A3-206ENST00000487633 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
COL4A3-206ENST00000487633 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
COL4A3-206ENST00000487633 H0YAA0 97 aa2.13□□□□□ -2.07
COL4A3-206ENST00000487633 ADM2Q7Z4H4 148 aa2.13□□□□□ -2.07
COL4A3-206ENST00000487633 SPANXA2-OT1Q8N9U9 137 aa2.13□□□□□ -2.07
COL4A3-206ENST00000487633 MT1MQ8N339 61 aa2.12□□□□□ -2.07
COL4A3-206ENST00000487633 KRTAP4-7Q9BYR0 210 aa2.12□□□□□ -2.07
COL4A3-206ENST00000487633 COA5Q86WW8 74 aa2.11□□□□□ -2.07
COL4A3-206ENST00000487633 SMIM26A0A096LP01 95 aa2.1□□□□□ -2.07
COL4A3-206ENST00000487633 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
COL4A3-206ENST00000487633 MT1GP13640 62 aa2.09□□□□□ -2.07
COL4A3-206ENST00000487633 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
COL4A3-206ENST00000487633 R4GN34 69 aa2.08□□□□□ -2.08
COL4A3-206ENST00000487633 M0QZ58 72 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms