RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 C4orf26Q17RF5 130 aa3.43□□□□□ -1.86
UBE4B-209ENST00000487244 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
UBE4B-209ENST00000487244 A0A1B0GV90 55 aa3.42□□□□□ -1.86
UBE4B-209ENST00000487244 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
UBE4B-209ENST00000487244 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
UBE4B-209ENST00000487244 ACYP1P07311 99 aa3.39□□□□□ -1.87
UBE4B-209ENST00000487244 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
UBE4B-209ENST00000487244 ATP5EP2Q5VTU8 51 aa3.37□□□□□ -1.87
UBE4B-209ENST00000487244 A0A087WVE0 104 aa3.36□□□□□ -1.87
UBE4B-209ENST00000487244 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
UBE4B-209ENST00000487244 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
UBE4B-209ENST00000487244 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
UBE4B-209ENST00000487244 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
UBE4B-209ENST00000487244 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.87
UBE4B-209ENST00000487244 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
UBE4B-209ENST00000487244 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
UBE4B-209ENST00000487244 LCA10Q71F78 164 aa3.33□□□□□ -1.88
UBE4B-209ENST00000487244 LINC00643Q86TS7 51 aa3.33□□□□□ -1.88
UBE4B-209ENST00000487244 S4R3F8 94 aa3.33□□□□□ -1.88
UBE4B-209ENST00000487244 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
UBE4B-209ENST00000487244 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
UBE4B-209ENST00000487244 H0Y9P7 68 aa3.3□□□□□ -1.88
UBE4B-209ENST00000487244 UQCRQO14949 82 aa3.3□□□□□ -1.88
UBE4B-209ENST00000487244 ATOX1O00244 68 aa3.27□□□□□ -1.89
UBE4B-209ENST00000487244 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
UBE4B-209ENST00000487244 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
UBE4B-209ENST00000487244 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
UBE4B-209ENST00000487244 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
UBE4B-209ENST00000487244 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
UBE4B-209ENST00000487244 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
UBE4B-209ENST00000487244 LINC00208Q96KT6 92 aa3.25□□□□□ -1.89
UBE4B-209ENST00000487244 J3QR89 54 aa3.24□□□□□ -1.89
UBE4B-209ENST00000487244 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
UBE4B-209ENST00000487244 MT1BP07438 61 aa3.21□□□□□ -1.9
UBE4B-209ENST00000487244 MP68P56378 58 aa3.21□□□□□ -1.9
UBE4B-209ENST00000487244 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
UBE4B-209ENST00000487244 MT-ATP8P03928 68 aa3.2□□□□□ -1.9
UBE4B-209ENST00000487244 KRTAP19-8Q3LI54 63 aa3.19□□□□□ -1.9
UBE4B-209ENST00000487244 A8MUN3 132 aa3.18□□□□□ -1.9
UBE4B-209ENST00000487244 NDUFC1O43677 76 aa3.18□□□□□ -1.9
UBE4B-209ENST00000487244 SCGB1A1P11684 91 aa3.18□□□□□ -1.9
UBE4B-209ENST00000487244 Q5VV11 94 aa3.17□□□□□ -1.9
UBE4B-209ENST00000487244 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
UBE4B-209ENST00000487244 H3BPC8 53 aa3.16□□□□□ -1.9
UBE4B-209ENST00000487244 K7ERU9 68 aa3.16□□□□□ -1.9
UBE4B-209ENST00000487244 IMUPQ9GZP8 106 aa3.16□□□□□ -1.9
UBE4B-209ENST00000487244 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
UBE4B-209ENST00000487244 H0YAA0 97 aa3.14□□□□□ -1.91
UBE4B-209ENST00000487244 ADM2Q7Z4H4 148 aa3.14□□□□□ -1.91
UBE4B-209ENST00000487244 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
UBE4B-209ENST00000487244 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
UBE4B-209ENST00000487244 TRAV7A0A075B6U4 112 aa3.12□□□□□ -1.91
UBE4B-209ENST00000487244 A6NN06 94 aa3.12□□□□□ -1.91
UBE4B-209ENST00000487244 CRIPTQ9P021 101 aa3.12□□□□□ -1.91
UBE4B-209ENST00000487244 P0C880 135 aa3.11□□□□□ -1.91
UBE4B-209ENST00000487244 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
UBE4B-209ENST00000487244 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
UBE4B-209ENST00000487244 SMIM20Q8N5G0 67 aa3.08□□□□□ -1.92
UBE4B-209ENST00000487244 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
UBE4B-209ENST00000487244 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
UBE4B-209ENST00000487244 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
UBE4B-209ENST00000487244 M0QZ58 72 aa3.04□□□□□ -1.92
UBE4B-209ENST00000487244 ACYP2P14621 99 aa3.04□□□□□ -1.92
UBE4B-209ENST00000487244 R4GN34 69 aa3.04□□□□□ -1.92
UBE4B-209ENST00000487244 C20orf197Q8N268 126 aa3.03□□□□□ -1.92
UBE4B-209ENST00000487244 SERP2Q8N6R1 65 aa3.03□□□□□ -1.92
UBE4B-209ENST00000487244 MT1XP80297 61 aa3.02□□□□□ -1.93
UBE4B-209ENST00000487244 LINC01554Q52M75 96 aa3□□□□□ -1.93
UBE4B-209ENST00000487244 PRAC1Q96KF2 57 aa3□□□□□ -1.93
UBE4B-209ENST00000487244 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
UBE4B-209ENST00000487244 SPANXA2-OT1Q8N9U9 137 aa2.99□□□□□ -1.93
UBE4B-209ENST00000487244 SPTSSBQ8NFR3 76 aa2.98□□□□□ -1.93
UBE4B-209ENST00000487244 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
UBE4B-209ENST00000487244 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
UBE4B-209ENST00000487244 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
UBE4B-209ENST00000487244 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
UBE4B-209ENST00000487244 KMT2DO14686 5537 aa2.95□□□□□ -1.94
UBE4B-209ENST00000487244 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
UBE4B-209ENST00000487244 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
UBE4B-209ENST00000487244 NEBP20929 6669 aa2.94□□□□□ -1.94
UBE4B-209ENST00000487244 COX7CP15954 63 aa2.94□□□□□ -1.94
UBE4B-209ENST00000487244 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
UBE4B-209ENST00000487244 KRTAP13-4Q3LI77 160 aa2.93□□□□□ -1.94
UBE4B-209ENST00000487244 COA5Q86WW8 74 aa2.93□□□□□ -1.94
UBE4B-209ENST00000487244 H7BZZ5 65 aa2.91□□□□□ -1.94
UBE4B-209ENST00000487244 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
UBE4B-209ENST00000487244 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
UBE4B-209ENST00000487244 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
UBE4B-209ENST00000487244 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
UBE4B-209ENST00000487244 ANAPC13Q9BS18 74 aa2.87□□□□□ -1.95
UBE4B-209ENST00000487244 CCDC179H3BU77 68 aa2.84□□□□□ -1.95
UBE4B-209ENST00000487244 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
UBE4B-209ENST00000487244 SPRR2EP22531 72 aa2.83□□□□□ -1.96
UBE4B-209ENST00000487244 SPRR2BP35325 72 aa2.83□□□□□ -1.96
UBE4B-209ENST00000487244 SPRR2AP35326 72 aa2.83□□□□□ -1.96
UBE4B-209ENST00000487244 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
UBE4B-209ENST00000487244 A0A0D9SG42 100 aa2.82□□□□□ -1.96
UBE4B-209ENST00000487244 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
UBE4B-209ENST00000487244 SEC61GP60059 68 aa2.81□□□□□ -1.96
UBE4B-209ENST00000487244 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms