RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TNXBP22105 4242 aa3.86□□□□□ -1.79
SF3A3-206ENST00000487062 PRR4Q16378 134 aa3.85□□□□□ -1.79
SF3A3-206ENST00000487062 Q1T7F1 81 aa3.84□□□□□ -1.79
SF3A3-206ENST00000487062 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
SF3A3-206ENST00000487062 PCOTHQ58A44 107 aa3.83□□□□□ -1.8
SF3A3-206ENST00000487062 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
SF3A3-206ENST00000487062 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
SF3A3-206ENST00000487062 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
SF3A3-206ENST00000487062 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
SF3A3-206ENST00000487062 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
SF3A3-206ENST00000487062 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
SF3A3-206ENST00000487062 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
SF3A3-206ENST00000487062 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
SF3A3-206ENST00000487062 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
SF3A3-206ENST00000487062 C7orf65Q6ZTY9 151 aa3.8□□□□□ -1.8
SF3A3-206ENST00000487062 RPL37P61927 97 aaKnown RBP3.79□□□□□ -1.8
SF3A3-206ENST00000487062 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
SF3A3-206ENST00000487062 HERC2O95714 4834 aa3.78□□□□□ -1.8
SF3A3-206ENST00000487062 HRES1P13985 223 aa3.77□□□□□ -1.81
SF3A3-206ENST00000487062 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
SF3A3-206ENST00000487062 SPINK7P58062 85 aa3.74□□□□□ -1.81
SF3A3-206ENST00000487062 ACYP2P14621 99 aa3.73□□□□□ -1.81
SF3A3-206ENST00000487062 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
SF3A3-206ENST00000487062 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
SF3A3-206ENST00000487062 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
SF3A3-206ENST00000487062 COA5Q86WW8 74 aa3.71□□□□□ -1.82
SF3A3-206ENST00000487062 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
SF3A3-206ENST00000487062 A8MUN3 132 aa3.7□□□□□ -1.82
SF3A3-206ENST00000487062 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SF3A3-206ENST00000487062 Q5VV11 94 aa3.68□□□□□ -1.82
SF3A3-206ENST00000487062 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
SF3A3-206ENST00000487062 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
SF3A3-206ENST00000487062 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
SF3A3-206ENST00000487062 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
SF3A3-206ENST00000487062 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
SF3A3-206ENST00000487062 A6NED7 52 aa3.62□□□□□ -1.83
SF3A3-206ENST00000487062 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
SF3A3-206ENST00000487062 RBM12B-AS1Q9P1G2 102 aa3.62□□□□□ -1.83
SF3A3-206ENST00000487062 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
SF3A3-206ENST00000487062 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
SF3A3-206ENST00000487062 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
SF3A3-206ENST00000487062 LPAP08519 4548 aa3.58□□□□□ -1.84
SF3A3-206ENST00000487062 LRP2P98164 4655 aa3.58□□□□□ -1.84
SF3A3-206ENST00000487062 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
SF3A3-206ENST00000487062 LCA10Q71F78 164 aa3.57□□□□□ -1.84
SF3A3-206ENST00000487062 S4R3F8 94 aa3.56□□□□□ -1.84
SF3A3-206ENST00000487062 A6NN06 94 aa3.55□□□□□ -1.84
SF3A3-206ENST00000487062 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
SF3A3-206ENST00000487062 A0A1B0GU69 56 aa3.52□□□□□ -1.85
SF3A3-206ENST00000487062 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
SF3A3-206ENST00000487062 A8MU10 97 aa3.5□□□□□ -1.85
SF3A3-206ENST00000487062 HERC1Q15751 4861 aa3.48□□□□□ -1.85
SF3A3-206ENST00000487062 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
SF3A3-206ENST00000487062 CSAG1Q6PB30 78 aa3.47□□□□□ -1.85
SF3A3-206ENST00000487062 UQCR11O14957 56 aa3.46□□□□□ -1.86
SF3A3-206ENST00000487062 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
SF3A3-206ENST00000487062 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
SF3A3-206ENST00000487062 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
SF3A3-206ENST00000487062 A0A1B0GU33 70 aa3.4□□□□□ -1.87
SF3A3-206ENST00000487062 H0YAA0 97 aa3.4□□□□□ -1.87
SF3A3-206ENST00000487062 ADM2Q7Z4H4 148 aa3.38□□□□□ -1.87
SF3A3-206ENST00000487062 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
SF3A3-206ENST00000487062 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
SF3A3-206ENST00000487062 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
SF3A3-206ENST00000487062 P0C880 135 aa3.34□□□□□ -1.87
SF3A3-206ENST00000487062 M0R2T5 61 aa3.32□□□□□ -1.88
SF3A3-206ENST00000487062 M0QZ58 72 aa3.31□□□□□ -1.88
SF3A3-206ENST00000487062 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SF3A3-206ENST00000487062 MT1HP80294 61 aa3.29□□□□□ -1.88
SF3A3-206ENST00000487062 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
SF3A3-206ENST00000487062 K7ERS5 55 aa3.28□□□□□ -1.88
SF3A3-206ENST00000487062 R4GN34 69 aa3.28□□□□□ -1.88
SF3A3-206ENST00000487062 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
SF3A3-206ENST00000487062 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
SF3A3-206ENST00000487062 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
SF3A3-206ENST00000487062 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SF3A3-206ENST00000487062 A0A0D9SG42 100 aa3.24□□□□□ -1.89
SF3A3-206ENST00000487062 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
SF3A3-206ENST00000487062 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
SF3A3-206ENST00000487062 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
SF3A3-206ENST00000487062 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
SF3A3-206ENST00000487062 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
SF3A3-206ENST00000487062 MT2AP02795 61 aa3.17□□□□□ -1.9
SF3A3-206ENST00000487062 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
SF3A3-206ENST00000487062 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
SF3A3-206ENST00000487062 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
SF3A3-206ENST00000487062 ROMO1P60602 79 aa3.15□□□□□ -1.91
SF3A3-206ENST00000487062 MT1FP04733 61 aa3.14□□□□□ -1.91
SF3A3-206ENST00000487062 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
SF3A3-206ENST00000487062 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SF3A3-206ENST00000487062 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
SF3A3-206ENST00000487062 MT3P25713 68 aa3.05□□□□□ -1.92
SF3A3-206ENST00000487062 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
SF3A3-206ENST00000487062 MT1BP07438 61 aa2.99□□□□□ -1.93
SF3A3-206ENST00000487062 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
SF3A3-206ENST00000487062 TNP1P09430 55 aa2.94□□□□□ -1.94
SF3A3-206ENST00000487062 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
SF3A3-206ENST00000487062 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SF3A3-206ENST00000487062 MT1XP80297 61 aa2.9□□□□□ -1.95
SF3A3-206ENST00000487062 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms