RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KRTAP19-8Q3LI54 63 aa10.99□□□□□ -0.65
LIME1-206ENST00000487026 MT-ATP8P03928 68 aa10.96□□□□□ -0.65
LIME1-206ENST00000487026 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
LIME1-206ENST00000487026 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
LIME1-206ENST00000487026 UQCRQO14949 82 aa10.92□□□□□ -0.66
LIME1-206ENST00000487026 KLKP1Q107X0 134 aa10.92□□□□□ -0.66
LIME1-206ENST00000487026 CYP4F30PQ9H0H9 118 aa10.9□□□□□ -0.66
LIME1-206ENST00000487026 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
LIME1-206ENST00000487026 KRTAP10-5P60370 271 aa10.85□□□□□ -0.67
LIME1-206ENST00000487026 ATOX1O00244 68 aa10.84□□□□□ -0.67
LIME1-206ENST00000487026 MUC12Q9UKN1 5478 aa10.8□□□□□ -0.68
LIME1-206ENST00000487026 OCR1Q9BZK8 76 aa10.8□□□□□ -0.68
LIME1-206ENST00000487026 NEBP20929 6669 aa10.78□□□□□ -0.68
LIME1-206ENST00000487026 H0Y9P7 68 aa10.78□□□□□ -0.68
LIME1-206ENST00000487026 SMIM20Q8N5G0 67 aa10.78□□□□□ -0.68
LIME1-206ENST00000487026 LOC101927531A0A1B0GV80 90 aa10.77□□□□□ -0.69
LIME1-206ENST00000487026 MP68P56378 58 aa10.77□□□□□ -0.69
LIME1-206ENST00000487026 CRIPTQ9P021 101 aa10.71□□□□□ -0.69
LIME1-206ENST00000487026 H3BPC8 53 aa10.68□□□□□ -0.7
LIME1-206ENST00000487026 TRAV7A0A075B6U4 112 aa10.66□□□□□ -0.7
LIME1-206ENST00000487026 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
LIME1-206ENST00000487026 NDUFC1O43677 76 aa10.61□□□□□ -0.71
LIME1-206ENST00000487026 KRTAP5-9P26371 169 aa10.58□□□□□ -0.72
LIME1-206ENST00000487026 H0YAA0 97 aa10.54□□□□□ -0.72
LIME1-206ENST00000487026 KMT2DO14686 5537 aa10.53□□□□□ -0.72
LIME1-206ENST00000487026 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
LIME1-206ENST00000487026 KRTAP20-1Q3LI63 56 aa10.5□□□□□ -0.73
LIME1-206ENST00000487026 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
LIME1-206ENST00000487026 MDN1Q9NU22 5596 aa10.49□□□□□ -0.73
LIME1-206ENST00000487026 A8MUN3 132 aa10.44□□□□□ -0.74
LIME1-206ENST00000487026 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
LIME1-206ENST00000487026 COX7CP15954 63 aa10.34□□□□□ -0.75
LIME1-206ENST00000487026 MT1XP80297 61 aa10.33□□□□□ -0.76
LIME1-206ENST00000487026 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
LIME1-206ENST00000487026 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
LIME1-206ENST00000487026 PRO2289Q9P1D8 64 aa10.3□□□□□ -0.76
LIME1-206ENST00000487026 PLAC4Q8WY50 150 aa10.28□□□□□ -0.76
LIME1-206ENST00000487026 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
LIME1-206ENST00000487026 P0C880 135 aa10.25□□□□□ -0.77
LIME1-206ENST00000487026 R4GN34 69 aa10.23□□□□□ -0.77
LIME1-206ENST00000487026 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
LIME1-206ENST00000487026 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
LIME1-206ENST00000487026 KRTAP2-3P0C7H8 128 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 ACYP2P14621 99 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 SPRR2EP22531 72 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 SPRR2BP35325 72 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 SPRR2AP35326 72 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 KRTAP2-4Q9BYR9 128 aa10.16□□□□□ -0.78
LIME1-206ENST00000487026 M0QZ58 72 aa10.15□□□□□ -0.78
LIME1-206ENST00000487026 KRTAP8-1Q8IUC2 63 aa10.14□□□□□ -0.79
LIME1-206ENST00000487026 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
LIME1-206ENST00000487026 KRTAP12-2P59991 146 aa10.07□□□□□ -0.8
LIME1-206ENST00000487026 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
LIME1-206ENST00000487026 H7BZZ5 65 aa10.01□□□□□ -0.81
LIME1-206ENST00000487026 KRTAP4-8A0A0G2JLE6 195 aa10□□□□□ -0.81
LIME1-206ENST00000487026 KRTAP4-8Q9BYQ9 185 aa10□□□□□ -0.81
LIME1-206ENST00000487026 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
LIME1-206ENST00000487026 CCDC179H3BU77 68 aa9.99□□□□□ -0.81
LIME1-206ENST00000487026 LCE1AQ5T7P2 110 aa9.99□□□□□ -0.81
LIME1-206ENST00000487026 SPTSSBQ8NFR3 76 aa9.99□□□□□ -0.81
LIME1-206ENST00000487026 CYSTM1Q9H1C7 97 aa9.94□□□□□ -0.82
LIME1-206ENST00000487026 KRTAP10-7P60409 375 aaPredicted RBP9.88□□□□□ -0.83
LIME1-206ENST00000487026 ATP5EP56381 51 aaPredicted RBP9.84□□□□□ -0.83
LIME1-206ENST00000487026 SPRR2DP22532 72 aa9.83□□□□□ -0.84
LIME1-206ENST00000487026 COA5Q86WW8 74 aa9.82□□□□□ -0.84
LIME1-206ENST00000487026 KRTAP2-2Q9BYT5 123 aa9.82□□□□□ -0.84
LIME1-206ENST00000487026 KRTAP2-1Q9BYU5 128 aa9.82□□□□□ -0.84
LIME1-206ENST00000487026 KRTAP10-12P60413 245 aa9.78□□□□□ -0.84
LIME1-206ENST00000487026 TMEM258P61165 79 aa9.75□□□□□ -0.85
LIME1-206ENST00000487026 PCP4P48539 62 aa9.58□□□□□ -0.88
LIME1-206ENST00000487026 SEC61GP60059 68 aa9.57□□□□□ -0.88
LIME1-206ENST00000487026 LCE3BQ5TA77 95 aa9.57□□□□□ -0.88
LIME1-206ENST00000487026 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.89
LIME1-206ENST00000487026 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
LIME1-206ENST00000487026 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
LIME1-206ENST00000487026 A0A1B0GU69 56 aa9.36□□□□□ -0.91
LIME1-206ENST00000487026 PRR15LQ9BU68 103 aa9.33□□□□□ -0.92
LIME1-206ENST00000487026 A0A1B0GU33 70 aa9.26□□□□□ -0.93
LIME1-206ENST00000487026 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
LIME1-206ENST00000487026 KRTAP19-7Q3SYF9 63 aa9.23□□□□□ -0.93
LIME1-206ENST00000487026 V9GYY9 64 aa9.19□□□□□ -0.94
LIME1-206ENST00000487026 A0A0D9SG42 100 aa9.18□□□□□ -0.94
LIME1-206ENST00000487026 LCE5AQ5TCM9 118 aa9.17□□□□□ -0.94
LIME1-206ENST00000487026 MT1EP04732 61 aa9.16□□□□□ -0.94
LIME1-206ENST00000487026 RPS28P62857 69 aaKnown RBP9.15□□□□□ -0.94
LIME1-206ENST00000487026 DSTQ03001 7570 aaKnown RBP9.15□□□□□ -0.95
LIME1-206ENST00000487026 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
LIME1-206ENST00000487026 KRTAP19-3Q7Z4W3 81 aa9.11□□□□□ -0.95
LIME1-206ENST00000487026 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
LIME1-206ENST00000487026 Q1T7F1 81 aa9.07□□□□□ -0.96
LIME1-206ENST00000487026 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
LIME1-206ENST00000487026 KRTAP4-9Q9BYQ8 210 aa9.03□□□□□ -0.96
LIME1-206ENST00000487026 UQCR11O14957 56 aa8.98□□□□□ -0.97
LIME1-206ENST00000487026 KRTAP19-5Q3LI72 72 aa8.97□□□□□ -0.97
LIME1-206ENST00000487026 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
LIME1-206ENST00000487026 PSPHP1O15172 72 aa8.92□□□□□ -0.98
LIME1-206ENST00000487026 GPR98Q8WXG9 6306 aa8.9□□□□□ -0.98
LIME1-206ENST00000487026 MT1GP13640 62 aa8.87□□□□□ -0.99
LIME1-206ENST00000487026 A8MU10 97 aa8.81□□□□□ -1
LIME1-206ENST00000487026 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms