RNA–Protein interactions for RNA: ENST00000486575.1

RANBP1-213, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 2,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-213ENST00000486575 RBM12B-AS1Q9P1G2 102 aa11.03□□□□□ -0.64
RANBP1-213ENST00000486575 H0YAA0 97 aa11.03□□□□□ -0.64
RANBP1-213ENST00000486575 MT1HL1P0DM35 61 aa11.02□□□□□ -0.65
RANBP1-213ENST00000486575 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.65
RANBP1-213ENST00000486575 A0A1B0GU33 70 aa11.01□□□□□ -0.65
RANBP1-213ENST00000486575 H1FX-AS1Q4G0G2 97 aa11□□□□□ -0.65
RANBP1-213ENST00000486575 KIAA1109Q2LD37 5005 aa10.99□□□□□ -0.65
RANBP1-213ENST00000486575 ADM2Q7Z4H4 148 aa10.9□□□□□ -0.66
RANBP1-213ENST00000486575 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
RANBP1-213ENST00000486575 PRAC1Q96KF2 57 aa10.89□□□□□ -0.67
RANBP1-213ENST00000486575 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
RANBP1-213ENST00000486575 HERC2O95714 4834 aa10.84□□□□□ -0.67
RANBP1-213ENST00000486575 S4R3F8 94 aa10.81□□□□□ -0.68
RANBP1-213ENST00000486575 TPRXLQ17RH7 258 aa10.77□□□□□ -0.69
RANBP1-213ENST00000486575 KRTAP10-6P60371 365 aaPredicted RBP10.76□□□□□ -0.69
RANBP1-213ENST00000486575 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
RANBP1-213ENST00000486575 PCLOQ9Y6V0 5065 aa10.66□□□□□ -0.7
RANBP1-213ENST00000486575 ABCA13Q86UQ4 5058 aa10.63□□□□□ -0.71
RANBP1-213ENST00000486575 CSAG1Q6PB30 78 aa10.62□□□□□ -0.71
RANBP1-213ENST00000486575 K7ERS5 55 aa10.62□□□□□ -0.71
RANBP1-213ENST00000486575 KRTAP4-5Q9BYR2 181 aa10.62□□□□□ -0.71
RANBP1-213ENST00000486575 KRTAP13-4Q3LI77 160 aa10.6□□□□□ -0.71
RANBP1-213ENST00000486575 LRP2P98164 4655 aa10.58□□□□□ -0.72
RANBP1-213ENST00000486575 LPAP08519 4548 aa10.55□□□□□ -0.72
RANBP1-213ENST00000486575 P0C880 135 aa10.54□□□□□ -0.72
RANBP1-213ENST00000486575 LINC01554Q52M75 96 aa10.52□□□□□ -0.72
RANBP1-213ENST00000486575 A0A0D9SG42 100 aa10.45□□□□□ -0.74
RANBP1-213ENST00000486575 KRTAP25-1Q3LHN0 102 aa10.41□□□□□ -0.74
RANBP1-213ENST00000486575 ROMO1P60602 79 aa10.36□□□□□ -0.75
RANBP1-213ENST00000486575 SEC61BP60468 96 aaKnown RBP10.35□□□□□ -0.75
RANBP1-213ENST00000486575 M0QZ58 72 aa10.26□□□□□ -0.77
RANBP1-213ENST00000486575 J3QL48 77 aa10.24□□□□□ -0.77
RANBP1-213ENST00000486575 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
RANBP1-213ENST00000486575 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
RANBP1-213ENST00000486575 KRTAP12-1P59990 96 aa10.21□□□□□ -0.78
RANBP1-213ENST00000486575 HERC1Q15751 4861 aa10.2□□□□□ -0.78
RANBP1-213ENST00000486575 CRIPTQ9P021 101 aa10.2□□□□□ -0.78
RANBP1-213ENST00000486575 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
RANBP1-213ENST00000486575 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
RANBP1-213ENST00000486575 KRTAP19-2Q3LHN2 52 aa10.04□□□□□ -0.8
RANBP1-213ENST00000486575 R4GN34 69 aa10□□□□□ -0.81
RANBP1-213ENST00000486575 C10orf95Q9H7T3 257 aa9.92□□□□□ -0.82
RANBP1-213ENST00000486575 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
RANBP1-213ENST00000486575 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
RANBP1-213ENST00000486575 FLGP20930 4061 aaPredicted RBP9.68□□□□□ -0.86
RANBP1-213ENST00000486575 UBR4Q5T4S7 5183 aa9.63□□□□□ -0.87
RANBP1-213ENST00000486575 MUC2Q02817 5179 aa9.6□□□□□ -0.87
RANBP1-213ENST00000486575 H3BS24 57 aa9.58□□□□□ -0.88
RANBP1-213ENST00000486575 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
RANBP1-213ENST00000486575 CAMK2N1Q7Z7J9 78 aa9.46□□□□□ -0.9
RANBP1-213ENST00000486575 KRTAP15-1Q3LI76 137 aa9.45□□□□□ -0.9
RANBP1-213ENST00000486575 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
RANBP1-213ENST00000486575 PP632Q6XCG6 107 aa9.27□□□□□ -0.92
RANBP1-213ENST00000486575 SPRR2GQ9BYE4 73 aa9.23□□□□□ -0.93
RANBP1-213ENST00000486575 MT1HP80294 61 aa9.22□□□□□ -0.93
RANBP1-213ENST00000486575 FAT4Q6V0I7 4981 aa9.2□□□□□ -0.94
RANBP1-213ENST00000486575 M0R2T5 61 aa9.17□□□□□ -0.94
RANBP1-213ENST00000486575 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
RANBP1-213ENST00000486575 TNP1P09430 55 aa9.13□□□□□ -0.95
RANBP1-213ENST00000486575 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
RANBP1-213ENST00000486575 NDUFAF8A1L188 74 aa9.07□□□□□ -0.96
RANBP1-213ENST00000486575 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
RANBP1-213ENST00000486575 MT2AP02795 61 aa9.04□□□□□ -0.96
RANBP1-213ENST00000486575 MT1FP04733 61 aa9.03□□□□□ -0.96
RANBP1-213ENST00000486575 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
RANBP1-213ENST00000486575 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
RANBP1-213ENST00000486575 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
RANBP1-213ENST00000486575 MT1BP07438 61 aa8.72□□□□□ -1.01
RANBP1-213ENST00000486575 LCE3AQ5TA76 89 aa8.65□□□□□ -1.02
RANBP1-213ENST00000486575 LUZP6Q538Z0 58 aa8.63□□□□□ -1.03
RANBP1-213ENST00000486575 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
RANBP1-213ENST00000486575 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
RANBP1-213ENST00000486575 KRTAP10-5P60370 271 aa8.62□□□□□ -1.03
RANBP1-213ENST00000486575 MT1XP80297 61 aa8.61□□□□□ -1.03
RANBP1-213ENST00000486575 SPRR5A0A1B0GTR4 108 aa8.6□□□□□ -1.03
RANBP1-213ENST00000486575 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
RANBP1-213ENST00000486575 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
RANBP1-213ENST00000486575 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
RANBP1-213ENST00000486575 PRO2289Q9P1D8 64 aa8.33□□□□□ -1.08
RANBP1-213ENST00000486575 KRTAP10-7P60409 375 aaPredicted RBP8.32□□□□□ -1.08
RANBP1-213ENST00000486575 LCE2BO14633 110 aa8.28□□□□□ -1.08
RANBP1-213ENST00000486575 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
RANBP1-213ENST00000486575 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
RANBP1-213ENST00000486575 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
RANBP1-213ENST00000486575 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
RANBP1-213ENST00000486575 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
RANBP1-213ENST00000486575 USH2AO75445 5202 aa7.89□□□□□ -1.15
RANBP1-213ENST00000486575 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
RANBP1-213ENST00000486575 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
RANBP1-213ENST00000486575 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
RANBP1-213ENST00000486575 CRCT1Q9UGL9 99 aa7.81□□□□□ -1.16
RANBP1-213ENST00000486575 LCE3CQ5T5A8 94 aa7.77□□□□□ -1.17
RANBP1-213ENST00000486575 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
RANBP1-213ENST00000486575 KMT2DO14686 5537 aa7.7□□□□□ -1.18
RANBP1-213ENST00000486575 KRTAP19-7Q3SYF9 63 aa7.69□□□□□ -1.18
RANBP1-213ENST00000486575 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
RANBP1-213ENST00000486575 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
RANBP1-213ENST00000486575 MT1EP04732 61 aa7.47□□□□□ -1.21
RANBP1-213ENST00000486575 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.21
RANBP1-213ENST00000486575 KRTAP9-6A8MVA2 160 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms