RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
USP41-204ENST00000486536 UQCRQO14949 82 aa3.24□□□□□ -1.89
USP41-204ENST00000486536 COX7CP15954 63 aa3.23□□□□□ -1.89
USP41-204ENST00000486536 TNXBP22105 4242 aa3.23□□□□□ -1.89
USP41-204ENST00000486536 LRP2P98164 4655 aa3.23□□□□□ -1.89
USP41-204ENST00000486536 TPRXLQ17RH7 258 aa3.21□□□□□ -1.9
USP41-204ENST00000486536 C20orf166-AS1Q96NR2 134 aa3.21□□□□□ -1.9
USP41-204ENST00000486536 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 A8MUU9 505 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 H3BPC8 53 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 MP68P56378 58 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
USP41-204ENST00000486536 TRAV22A0A0B4J277 110 aa3.19□□□□□ -1.9
USP41-204ENST00000486536 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
USP41-204ENST00000486536 H0Y9P7 68 aa3.18□□□□□ -1.9
USP41-204ENST00000486536 KLKP1Q107X0 134 aa3.18□□□□□ -1.9
USP41-204ENST00000486536 CCDC179H3BU77 68 aa3.17□□□□□ -1.9
USP41-204ENST00000486536 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
USP41-204ENST00000486536 ZCCHC13Q8WW36 166 aaKnown RBP3.17□□□□□ -1.9
USP41-204ENST00000486536 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
USP41-204ENST00000486536 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
USP41-204ENST00000486536 LOC101927531A0A1B0GV80 90 aa3.15□□□□□ -1.91
USP41-204ENST00000486536 NDUFC1O43677 76 aa3.15□□□□□ -1.91
USP41-204ENST00000486536 ATP11AUNQ6ZP68 121 aa3.15□□□□□ -1.91
USP41-204ENST00000486536 C1orf64Q8NEQ6 169 aa3.15□□□□□ -1.91
USP41-204ENST00000486536 LINC00208Q96KT6 92 aa3.15□□□□□ -1.91
USP41-204ENST00000486536 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
USP41-204ENST00000486536 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
USP41-204ENST00000486536 CYP4F30PQ9H0H9 118 aa3.12□□□□□ -1.91
USP41-204ENST00000486536 H7BZZ5 65 aa3.11□□□□□ -1.91
USP41-204ENST00000486536 C7orf65Q6ZTY9 151 aa3.11□□□□□ -1.91
USP41-204ENST00000486536 K7ERS5 55 aa3.1□□□□□ -1.91
USP41-204ENST00000486536 TMEM258P61165 79 aa3.1□□□□□ -1.91
USP41-204ENST00000486536 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
USP41-204ENST00000486536 LPAP08519 4548 aa3.1□□□□□ -1.91
USP41-204ENST00000486536 ATP5EP56381 51 aaPredicted RBP3.08□□□□□ -1.92
USP41-204ENST00000486536 SPINK7P58062 85 aa3.08□□□□□ -1.92
USP41-204ENST00000486536 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
USP41-204ENST00000486536 MUC2Q02817 5179 aa3.06□□□□□ -1.92
USP41-204ENST00000486536 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
USP41-204ENST00000486536 FAM236DA0A1B0GTK5 79 aa3.05□□□□□ -1.92
USP41-204ENST00000486536 FAM236CP0DP71 79 aa3.05□□□□□ -1.92
USP41-204ENST00000486536 HRES1P13985 223 aa3.05□□□□□ -1.92
USP41-204ENST00000486536 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
USP41-204ENST00000486536 A8MUN3 132 aa3.03□□□□□ -1.92
USP41-204ENST00000486536 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
USP41-204ENST00000486536 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
USP41-204ENST00000486536 ACYP2P14621 99 aa3.01□□□□□ -1.93
USP41-204ENST00000486536 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
USP41-204ENST00000486536 COX6B2Q6YFQ2 88 aa3.01□□□□□ -1.93
USP41-204ENST00000486536 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
USP41-204ENST00000486536 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
USP41-204ENST00000486536 A6NED7 52 aa2.99□□□□□ -1.93
USP41-204ENST00000486536 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
USP41-204ENST00000486536 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
USP41-204ENST00000486536 SERP1Q9Y6X1 66 aa2.99□□□□□ -1.93
USP41-204ENST00000486536 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
USP41-204ENST00000486536 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
USP41-204ENST00000486536 COA5Q86WW8 74 aa2.96□□□□□ -1.94
USP41-204ENST00000486536 CHKB-CPT1BH3BT56 60 aa2.95□□□□□ -1.94
USP41-204ENST00000486536 H1FX-AS1Q4G0G2 97 aa2.95□□□□□ -1.94
USP41-204ENST00000486536 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
USP41-204ENST00000486536 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
USP41-204ENST00000486536 SPTSSBQ8NFR3 76 aa2.93□□□□□ -1.94
USP41-204ENST00000486536 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
USP41-204ENST00000486536 S4R3F8 94 aa2.91□□□□□ -1.94
USP41-204ENST00000486536 LCA10Q71F78 164 aa2.89□□□□□ -1.95
USP41-204ENST00000486536 R4GN34 69 aa2.89□□□□□ -1.95
USP41-204ENST00000486536 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
USP41-204ENST00000486536 Q1T7F1 81 aa2.87□□□□□ -1.95
USP41-204ENST00000486536 CSAG1Q6PB30 78 aa2.87□□□□□ -1.95
USP41-204ENST00000486536 A0A1B0GU33 70 aa2.86□□□□□ -1.95
USP41-204ENST00000486536 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
USP41-204ENST00000486536 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
USP41-204ENST00000486536 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
USP41-204ENST00000486536 PRR15LQ9BU68 103 aa2.83□□□□□ -1.96
USP41-204ENST00000486536 H0YAA0 97 aa2.82□□□□□ -1.96
USP41-204ENST00000486536 A0A1B0GU69 56 aa2.81□□□□□ -1.96
USP41-204ENST00000486536 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
USP41-204ENST00000486536 MT1HP80294 61 aa2.8□□□□□ -1.96
USP41-204ENST00000486536 M0R2T5 61 aa2.77□□□□□ -1.97
USP41-204ENST00000486536 Q5VV11 94 aa2.77□□□□□ -1.97
USP41-204ENST00000486536 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
USP41-204ENST00000486536 UQCR11O14957 56 aa2.74□□□□□ -1.97
USP41-204ENST00000486536 P0C880 135 aa2.73□□□□□ -1.97
USP41-204ENST00000486536 FLGP20930 4061 aaPredicted RBP2.73□□□□□ -1.97
USP41-204ENST00000486536 M0QZ58 72 aa2.72□□□□□ -1.97
USP41-204ENST00000486536 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
USP41-204ENST00000486536 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
USP41-204ENST00000486536 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
USP41-204ENST00000486536 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
USP41-204ENST00000486536 MT2AP02795 61 aa2.68□□□□□ -1.98
USP41-204ENST00000486536 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
USP41-204ENST00000486536 USH2AO75445 5202 aa2.66□□□□□ -1.98
USP41-204ENST00000486536 MT1FP04733 61 aa2.66□□□□□ -1.98
USP41-204ENST00000486536 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
USP41-204ENST00000486536 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
USP41-204ENST00000486536 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
USP41-204ENST00000486536 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms