RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 PLCE1Q9P212 2302 aa1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 FLG2Q5D862 2391 aaPredicted RBP1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 K7EIL1 84 aa1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 ZANQ9Y493 2812 aa1.91□□□□□ -2.1
R3HDM1-217ENST00000486532 SVEP1Q4LDE5 3571 aa1.9□□□□□ -2.1
R3HDM1-217ENST00000486532 HERC2O95714 4834 aa1.9□□□□□ -2.11
R3HDM1-217ENST00000486532 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.11
R3HDM1-217ENST00000486532 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
R3HDM1-217ENST00000486532 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
R3HDM1-217ENST00000486532 Q5VSD8 79 aa1.88□□□□□ -2.11
R3HDM1-217ENST00000486532 PRO0255Q9UI72 69 aa1.88□□□□□ -2.11
R3HDM1-217ENST00000486532 TRRAPQ9Y4A5 3859 aa1.87□□□□□ -2.11
R3HDM1-217ENST00000486532 CD52P31358 61 aa1.87□□□□□ -2.11
R3HDM1-217ENST00000486532 RPL39P5Q59GN2 51 aa1.87□□□□□ -2.11
R3HDM1-217ENST00000486532 LELP1Q5T871 98 aa1.86□□□□□ -2.11
R3HDM1-217ENST00000486532 APLNQ9ULZ1 77 aa1.86□□□□□ -2.11
R3HDM1-217ENST00000486532 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
R3HDM1-217ENST00000486532 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
R3HDM1-217ENST00000486532 STAB2Q8WWQ8 2551 aa1.84□□□□□ -2.11
R3HDM1-217ENST00000486532 SPRR1AP35321 89 aa1.84□□□□□ -2.11
R3HDM1-217ENST00000486532 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
R3HDM1-217ENST00000486532 NOP10Q9NPE3 64 aaKnown RBP1.84□□□□□ -2.11
R3HDM1-217ENST00000486532 COL7A1Q02388 2944 aa1.83□□□□□ -2.12
R3HDM1-217ENST00000486532 WNK2Q9Y3S1 2297 aa1.82□□□□□ -2.12
R3HDM1-217ENST00000486532 DEFB108AA8MXU0 73 aa1.82□□□□□ -2.12
R3HDM1-217ENST00000486532 PRLHP81277 87 aa1.82□□□□□ -2.12
R3HDM1-217ENST00000486532 KLK9Q2XQG4 91 aa1.82□□□□□ -2.12
R3HDM1-217ENST00000486532 HERC1Q15751 4861 aa1.82□□□□□ -2.12
R3HDM1-217ENST00000486532 A8MTW9 85 aa1.81□□□□□ -2.12
R3HDM1-217ENST00000486532 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
R3HDM1-217ENST00000486532 ROS1P08922 2347 aa1.79□□□□□ -2.12
R3HDM1-217ENST00000486532 DEFB104AQ8WTQ1 72 aa1.78□□□□□ -2.12
R3HDM1-217ENST00000486532 S4R3F8 94 aa1.78□□□□□ -2.12
R3HDM1-217ENST00000486532 MUC2Q02817 5179 aa1.78□□□□□ -2.13
R3HDM1-217ENST00000486532 SPRR1BP22528 89 aa1.77□□□□□ -2.13
R3HDM1-217ENST00000486532 ANK3Q12955 4377 aaKnown RBP1.75□□□□□ -2.13
R3HDM1-217ENST00000486532 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
R3HDM1-217ENST00000486532 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
R3HDM1-217ENST00000486532 DMBT1Q9UGM3 2413 aaPredicted RBP1.74□□□□□ -2.13
R3HDM1-217ENST00000486532 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
R3HDM1-217ENST00000486532 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
R3HDM1-217ENST00000486532 SACSQ9NZJ4 4579 aa1.73□□□□□ -2.13
R3HDM1-217ENST00000486532 DNAH1Q9P2D7 4330 aa1.72□□□□□ -2.13
R3HDM1-217ENST00000486532 H3BUX3 64 aa1.71□□□□□ -2.14
R3HDM1-217ENST00000486532 SRRM2Q9UQ35 2752 aaKnown RBP1.71□□□□□ -2.14
R3HDM1-217ENST00000486532 CSMD3Q7Z407 3707 aa1.7□□□□□ -2.14
R3HDM1-217ENST00000486532 SPINK1P00995 79 aa1.7□□□□□ -2.14
R3HDM1-217ENST00000486532 LYSTQ99698 3801 aa1.7□□□□□ -2.14
R3HDM1-217ENST00000486532 FRAS1Q86XX4 4008 aa1.7□□□□□ -2.14
R3HDM1-217ENST00000486532 H0YGG7 62 aa1.68□□□□□ -2.14
R3HDM1-217ENST00000486532 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
R3HDM1-217ENST00000486532 U3KQA8 63 aa1.68□□□□□ -2.14
R3HDM1-217ENST00000486532 COX14Q96I36 57 aa1.67□□□□□ -2.14
R3HDM1-217ENST00000486532 DEFB133Q30KQ1 61 aa1.66□□□□□ -2.14
R3HDM1-217ENST00000486532 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
R3HDM1-217ENST00000486532 HRNRQ86YZ3 2850 aaPredicted RBP1.66□□□□□ -2.14
R3HDM1-217ENST00000486532 M0QZ58 72 aa1.65□□□□□ -2.15
R3HDM1-217ENST00000486532 RNF213Q63HN8 5207 aa1.65□□□□□ -2.15
R3HDM1-217ENST00000486532 FAT4Q6V0I7 4981 aa1.65□□□□□ -2.15
R3HDM1-217ENST00000486532 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
R3HDM1-217ENST00000486532 STATHP02808 62 aa1.64□□□□□ -2.15
R3HDM1-217ENST00000486532 KMT2AQ03164 3969 aa1.64□□□□□ -2.15
R3HDM1-217ENST00000486532 APELAP0DMC3 54 aa1.63□□□□□ -2.15
R3HDM1-217ENST00000486532 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
R3HDM1-217ENST00000486532 A0A0D9SG42 100 aa1.62□□□□□ -2.15
R3HDM1-217ENST00000486532 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
R3HDM1-217ENST00000486532 RHPN1-AS1Q9BWJ2 59 aa1.62□□□□□ -2.15
R3HDM1-217ENST00000486532 DNAH7Q8WXX0 4024 aa1.6□□□□□ -2.15
R3HDM1-217ENST00000486532 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
R3HDM1-217ENST00000486532 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.15
R3HDM1-217ENST00000486532 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
R3HDM1-217ENST00000486532 DNAH9Q9NYC9 4486 aa1.57□□□□□ -2.16
R3HDM1-217ENST00000486532 HMCN2Q8NDA2 5059 aa1.57□□□□□ -2.16
R3HDM1-217ENST00000486532 STARD9Q9P2P6 4700 aa1.56□□□□□ -2.16
R3HDM1-217ENST00000486532 HTN1P15515 57 aa1.55□□□□□ -2.16
R3HDM1-217ENST00000486532 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
R3HDM1-217ENST00000486532 HSPG2P98160 4391 aa1.54□□□□□ -2.16
R3HDM1-217ENST00000486532 SYNE2Q8WXH0 6885 aaKnown RBP1.53□□□□□ -2.16
R3HDM1-217ENST00000486532 DNAH3Q8TD57 4116 aa1.53□□□□□ -2.16
R3HDM1-217ENST00000486532 DNAH10Q8IVF4 4471 aa1.53□□□□□ -2.16
R3HDM1-217ENST00000486532 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
R3HDM1-217ENST00000486532 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
R3HDM1-217ENST00000486532 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
R3HDM1-217ENST00000486532 DEFB1P60022 68 aa1.52□□□□□ -2.17
R3HDM1-217ENST00000486532 NEBP20929 6669 aa1.52□□□□□ -2.17
R3HDM1-217ENST00000486532 PLECQ15149 4684 aaKnown RBP1.52□□□□□ -2.17
R3HDM1-217ENST00000486532 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
R3HDM1-217ENST00000486532 HUWE1Q7Z6Z7 4374 aaKnown RBP1.51□□□□□ -2.17
R3HDM1-217ENST00000486532 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
R3HDM1-217ENST00000486532 FAT2Q9NYQ8 4349 aa1.5□□□□□ -2.17
R3HDM1-217ENST00000486532 DEFB108BQ8NET1 73 aa1.49□□□□□ -2.17
R3HDM1-217ENST00000486532 TNP1P09430 55 aa1.48□□□□□ -2.17
R3HDM1-217ENST00000486532 LRP2P98164 4655 aa1.48□□□□□ -2.17
R3HDM1-217ENST00000486532 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
R3HDM1-217ENST00000486532 DEFB110Q30KQ9 67 aa1.46□□□□□ -2.18
R3HDM1-217ENST00000486532 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
R3HDM1-217ENST00000486532 APOBP04114 4563 aaKnown RBP1.45□□□□□ -2.18
R3HDM1-217ENST00000486532 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms