RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
SND1-213ENST00000486037 ZCCHC13Q8WW36 166 aaKnown RBP5.01□□□□□ -1.61
SND1-213ENST00000486037 TRAV22A0A0B4J277 110 aa5□□□□□ -1.61
SND1-213ENST00000486037 C5orf47Q569G3 176 aa5□□□□□ -1.61
SND1-213ENST00000486037 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
SND1-213ENST00000486037 C20orf197Q8N268 126 aa4.99□□□□□ -1.61
SND1-213ENST00000486037 MP68P56378 58 aa4.98□□□□□ -1.61
SND1-213ENST00000486037 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
SND1-213ENST00000486037 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
SND1-213ENST00000486037 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
SND1-213ENST00000486037 H3BPC8 53 aa4.95□□□□□ -1.62
SND1-213ENST00000486037 C1orf64Q8NEQ6 169 aa4.95□□□□□ -1.62
SND1-213ENST00000486037 CYSTM1Q9H1C7 97 aa4.95□□□□□ -1.62
SND1-213ENST00000486037 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
SND1-213ENST00000486037 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
SND1-213ENST00000486037 ATP11AUNQ6ZP68 121 aa4.94□□□□□ -1.62
SND1-213ENST00000486037 KMT2DO14686 5537 aa4.94□□□□□ -1.62
SND1-213ENST00000486037 LOC101927531A0A1B0GV80 90 aa4.92□□□□□ -1.62
SND1-213ENST00000486037 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
SND1-213ENST00000486037 IGKV2D-30A0A075B6S6 120 aa4.91□□□□□ -1.62
SND1-213ENST00000486037 C7orf65Q6ZTY9 151 aa4.89□□□□□ -1.63
SND1-213ENST00000486037 H7BZZ5 65 aa4.88□□□□□ -1.63
SND1-213ENST00000486037 SPINK7P58062 85 aa4.88□□□□□ -1.63
SND1-213ENST00000486037 NDUFC1O43677 76 aa4.86□□□□□ -1.63
SND1-213ENST00000486037 HRES1P13985 223 aa4.84□□□□□ -1.63
SND1-213ENST00000486037 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
SND1-213ENST00000486037 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
SND1-213ENST00000486037 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
SND1-213ENST00000486037 TMEM258P61165 79 aa4.79□□□□□ -1.64
SND1-213ENST00000486037 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
SND1-213ENST00000486037 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
SND1-213ENST00000486037 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
SND1-213ENST00000486037 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
SND1-213ENST00000486037 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
SND1-213ENST00000486037 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
SND1-213ENST00000486037 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
SND1-213ENST00000486037 RBM12B-AS1Q9P1G2 102 aa4.7□□□□□ -1.66
SND1-213ENST00000486037 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SND1-213ENST00000486037 A8MUN3 132 aa4.69□□□□□ -1.66
SND1-213ENST00000486037 ACYP2P14621 99 aa4.68□□□□□ -1.66
SND1-213ENST00000486037 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
SND1-213ENST00000486037 COA5Q86WW8 74 aa4.66□□□□□ -1.66
SND1-213ENST00000486037 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
SND1-213ENST00000486037 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
SND1-213ENST00000486037 A6NN06 94 aa4.6□□□□□ -1.67
SND1-213ENST00000486037 LCA10Q71F78 164 aa4.6□□□□□ -1.67
SND1-213ENST00000486037 S4R3F8 94 aa4.6□□□□□ -1.67
SND1-213ENST00000486037 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
SND1-213ENST00000486037 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
SND1-213ENST00000486037 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
SND1-213ENST00000486037 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
SND1-213ENST00000486037 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
SND1-213ENST00000486037 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SND1-213ENST00000486037 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
SND1-213ENST00000486037 MT1BP07438 61 aa4.52□□□□□ -1.69
SND1-213ENST00000486037 SPRR2EP22531 72 aa4.52□□□□□ -1.69
SND1-213ENST00000486037 SPRR2BP35325 72 aa4.52□□□□□ -1.69
SND1-213ENST00000486037 SPRR2AP35326 72 aa4.52□□□□□ -1.69
SND1-213ENST00000486037 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
SND1-213ENST00000486037 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
SND1-213ENST00000486037 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
SND1-213ENST00000486037 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
SND1-213ENST00000486037 KRTAP10-5P60370 271 aa4.48□□□□□ -1.69
SND1-213ENST00000486037 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
SND1-213ENST00000486037 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
SND1-213ENST00000486037 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
SND1-213ENST00000486037 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
SND1-213ENST00000486037 Q1T7F1 81 aa4.44□□□□□ -1.7
SND1-213ENST00000486037 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
SND1-213ENST00000486037 V9GYY9 64 aa4.41□□□□□ -1.7
SND1-213ENST00000486037 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
SND1-213ENST00000486037 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
SND1-213ENST00000486037 A0A1B0GU69 56 aa4.39□□□□□ -1.71
SND1-213ENST00000486037 H0YAA0 97 aa4.39□□□□□ -1.71
SND1-213ENST00000486037 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
SND1-213ENST00000486037 Q5VV11 94 aa4.38□□□□□ -1.71
SND1-213ENST00000486037 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
SND1-213ENST00000486037 PSPHP1O15172 72 aa4.37□□□□□ -1.71
SND1-213ENST00000486037 P0C880 135 aa4.37□□□□□ -1.71
SND1-213ENST00000486037 SPRR2DP22532 72 aa4.37□□□□□ -1.71
SND1-213ENST00000486037 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
SND1-213ENST00000486037 SEC61GP60059 68 aa4.36□□□□□ -1.71
SND1-213ENST00000486037 A0A1B0GU33 70 aa4.29□□□□□ -1.72
SND1-213ENST00000486037 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SND1-213ENST00000486037 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
SND1-213ENST00000486037 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
SND1-213ENST00000486037 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
SND1-213ENST00000486037 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SND1-213ENST00000486037 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
SND1-213ENST00000486037 A6NED7 52 aa4.23□□□□□ -1.73
SND1-213ENST00000486037 UQCR11O14957 56 aa4.23□□□□□ -1.73
SND1-213ENST00000486037 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
SND1-213ENST00000486037 M0QZ58 72 aa4.22□□□□□ -1.73
SND1-213ENST00000486037 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
SND1-213ENST00000486037 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
SND1-213ENST00000486037 R4GN34 69 aa4.21□□□□□ -1.74
SND1-213ENST00000486037 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
SND1-213ENST00000486037 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
SND1-213ENST00000486037 A8MU10 97 aa4.18□□□□□ -1.74
SND1-213ENST00000486037 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms