RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
HLA-DOA-204ENST00000485901 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
HLA-DOA-204ENST00000485901 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
HLA-DOA-204ENST00000485901 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
HLA-DOA-204ENST00000485901 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
HLA-DOA-204ENST00000485901 IMUPQ9GZP8 106 aa5.63□□□□□ -1.51
HLA-DOA-204ENST00000485901 LCA10Q71F78 164 aa5.62□□□□□ -1.51
HLA-DOA-204ENST00000485901 H3BPC8 53 aa5.59□□□□□ -1.51
HLA-DOA-204ENST00000485901 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
HLA-DOA-204ENST00000485901 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
HLA-DOA-204ENST00000485901 A8MUN3 132 aa5.56□□□□□ -1.52
HLA-DOA-204ENST00000485901 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
HLA-DOA-204ENST00000485901 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
HLA-DOA-204ENST00000485901 SMIM20Q8N5G0 67 aa5.53□□□□□ -1.52
HLA-DOA-204ENST00000485901 NDUFC1O43677 76 aa5.52□□□□□ -1.53
HLA-DOA-204ENST00000485901 NEBP20929 6669 aa5.52□□□□□ -1.53
HLA-DOA-204ENST00000485901 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
HLA-DOA-204ENST00000485901 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
HLA-DOA-204ENST00000485901 H0YAA0 97 aa5.42□□□□□ -1.54
HLA-DOA-204ENST00000485901 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
HLA-DOA-204ENST00000485901 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
HLA-DOA-204ENST00000485901 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
HLA-DOA-204ENST00000485901 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
HLA-DOA-204ENST00000485901 A6NN06 94 aa5.38□□□□□ -1.55
HLA-DOA-204ENST00000485901 ACYP2P14621 99 aa5.37□□□□□ -1.55
HLA-DOA-204ENST00000485901 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
HLA-DOA-204ENST00000485901 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
HLA-DOA-204ENST00000485901 Q5VV11 94 aa5.34□□□□□ -1.55
HLA-DOA-204ENST00000485901 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
HLA-DOA-204ENST00000485901 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
HLA-DOA-204ENST00000485901 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
HLA-DOA-204ENST00000485901 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
HLA-DOA-204ENST00000485901 MT1BP07438 61 aa5.29□□□□□ -1.56
HLA-DOA-204ENST00000485901 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
HLA-DOA-204ENST00000485901 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
HLA-DOA-204ENST00000485901 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
HLA-DOA-204ENST00000485901 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
HLA-DOA-204ENST00000485901 P0C880 135 aa5.23□□□□□ -1.57
HLA-DOA-204ENST00000485901 COX7CP15954 63 aa5.23□□□□□ -1.57
HLA-DOA-204ENST00000485901 R4GN34 69 aa5.22□□□□□ -1.57
HLA-DOA-204ENST00000485901 KMT2DO14686 5537 aa5.21□□□□□ -1.58
HLA-DOA-204ENST00000485901 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
HLA-DOA-204ENST00000485901 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
HLA-DOA-204ENST00000485901 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
HLA-DOA-204ENST00000485901 M0QZ58 72 aa5.17□□□□□ -1.58
HLA-DOA-204ENST00000485901 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
HLA-DOA-204ENST00000485901 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
HLA-DOA-204ENST00000485901 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
HLA-DOA-204ENST00000485901 H7BZZ5 65 aa5.11□□□□□ -1.59
HLA-DOA-204ENST00000485901 COA5Q86WW8 74 aa5.1□□□□□ -1.59
HLA-DOA-204ENST00000485901 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
HLA-DOA-204ENST00000485901 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
HLA-DOA-204ENST00000485901 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
HLA-DOA-204ENST00000485901 SEC61GP60059 68 aa5.02□□□□□ -1.61
HLA-DOA-204ENST00000485901 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
HLA-DOA-204ENST00000485901 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
HLA-DOA-204ENST00000485901 SPRR2EP22531 72 aa5.01□□□□□ -1.61
HLA-DOA-204ENST00000485901 SPRR2BP35325 72 aa5.01□□□□□ -1.61
HLA-DOA-204ENST00000485901 SPRR2AP35326 72 aa5.01□□□□□ -1.61
HLA-DOA-204ENST00000485901 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
HLA-DOA-204ENST00000485901 MT1XP80297 61 aa5□□□□□ -1.61
HLA-DOA-204ENST00000485901 SERP1Q9Y6X1 66 aa5□□□□□ -1.61
HLA-DOA-204ENST00000485901 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
HLA-DOA-204ENST00000485901 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
HLA-DOA-204ENST00000485901 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
HLA-DOA-204ENST00000485901 ATP5EP56381 51 aaPredicted RBP4.92□□□□□ -1.62
HLA-DOA-204ENST00000485901 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
HLA-DOA-204ENST00000485901 KRTAP8-1Q8IUC2 63 aa4.92□□□□□ -1.62
HLA-DOA-204ENST00000485901 A0A1B0GU33 70 aa4.89□□□□□ -1.63
HLA-DOA-204ENST00000485901 A0A1B0GU69 56 aa4.87□□□□□ -1.63
HLA-DOA-204ENST00000485901 SPRR2DP22532 72 aa4.86□□□□□ -1.63
HLA-DOA-204ENST00000485901 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
HLA-DOA-204ENST00000485901 TMEM258P61165 79 aa4.83□□□□□ -1.64
HLA-DOA-204ENST00000485901 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
HLA-DOA-204ENST00000485901 A0A0D9SG42 100 aa4.82□□□□□ -1.64
HLA-DOA-204ENST00000485901 PCP4P48539 62 aa4.82□□□□□ -1.64
HLA-DOA-204ENST00000485901 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
HLA-DOA-204ENST00000485901 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
HLA-DOA-204ENST00000485901 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
HLA-DOA-204ENST00000485901 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
HLA-DOA-204ENST00000485901 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
HLA-DOA-204ENST00000485901 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
HLA-DOA-204ENST00000485901 LINC01558Q9Y6Z2 57 aa4.75□□□□□ -1.65
HLA-DOA-204ENST00000485901 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
HLA-DOA-204ENST00000485901 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
HLA-DOA-204ENST00000485901 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
HLA-DOA-204ENST00000485901 A8MU10 97 aa4.68□□□□□ -1.66
HLA-DOA-204ENST00000485901 UQCR11O14957 56 aa4.62□□□□□ -1.67
HLA-DOA-204ENST00000485901 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
HLA-DOA-204ENST00000485901 V9GYY9 64 aa4.58□□□□□ -1.68
HLA-DOA-204ENST00000485901 Q1T7F1 81 aa4.54□□□□□ -1.68
HLA-DOA-204ENST00000485901 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
HLA-DOA-204ENST00000485901 PSPHP1O15172 72 aa4.5□□□□□ -1.69
HLA-DOA-204ENST00000485901 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
HLA-DOA-204ENST00000485901 TNP1P09430 55 aa4.49□□□□□ -1.69
HLA-DOA-204ENST00000485901 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
HLA-DOA-204ENST00000485901 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
HLA-DOA-204ENST00000485901 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
HLA-DOA-204ENST00000485901 K7ERS5 55 aa4.44□□□□□ -1.7
HLA-DOA-204ENST00000485901 MT1EP04732 61 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms