RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 SPINK7P58062 85 aa4.75□□□□□ -1.65
SHROOM3-207ENST00000485780 TP53AIP1Q9HCN2 124 aa4.75□□□□□ -1.65
SHROOM3-207ENST00000485780 TMEM258P61165 79 aa4.74□□□□□ -1.65
SHROOM3-207ENST00000485780 H7BZZ5 65 aa4.73□□□□□ -1.65
SHROOM3-207ENST00000485780 NDUFC1O43677 76 aa4.73□□□□□ -1.65
SHROOM3-207ENST00000485780 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
SHROOM3-207ENST00000485780 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
SHROOM3-207ENST00000485780 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
SHROOM3-207ENST00000485780 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
SHROOM3-207ENST00000485780 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
SHROOM3-207ENST00000485780 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
SHROOM3-207ENST00000485780 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
SHROOM3-207ENST00000485780 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
SHROOM3-207ENST00000485780 TRAV22A0A0B4J277 110 aa4.67□□□□□ -1.66
SHROOM3-207ENST00000485780 H3BPC8 53 aa4.67□□□□□ -1.66
SHROOM3-207ENST00000485780 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
SHROOM3-207ENST00000485780 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
SHROOM3-207ENST00000485780 MP68P56378 58 aa4.64□□□□□ -1.67
SHROOM3-207ENST00000485780 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
SHROOM3-207ENST00000485780 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SHROOM3-207ENST00000485780 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
SHROOM3-207ENST00000485780 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
SHROOM3-207ENST00000485780 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
SHROOM3-207ENST00000485780 H0Y9P7 68 aa4.61□□□□□ -1.67
SHROOM3-207ENST00000485780 CYP4F30PQ9H0H9 118 aa4.61□□□□□ -1.67
SHROOM3-207ENST00000485780 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
SHROOM3-207ENST00000485780 C1orf64Q8NEQ6 169 aa4.59□□□□□ -1.67
SHROOM3-207ENST00000485780 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
SHROOM3-207ENST00000485780 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
SHROOM3-207ENST00000485780 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
SHROOM3-207ENST00000485780 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
SHROOM3-207ENST00000485780 SPANXA2-OT1Q8N9U9 137 aa4.57□□□□□ -1.68
SHROOM3-207ENST00000485780 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
SHROOM3-207ENST00000485780 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
SHROOM3-207ENST00000485780 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
SHROOM3-207ENST00000485780 A8MUN3 132 aa4.46□□□□□ -1.7
SHROOM3-207ENST00000485780 MT2AP02795 61 aa4.45□□□□□ -1.7
SHROOM3-207ENST00000485780 S4R3F8 94 aa4.45□□□□□ -1.7
SHROOM3-207ENST00000485780 USH2AO75445 5202 aa4.45□□□□□ -1.7
SHROOM3-207ENST00000485780 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
SHROOM3-207ENST00000485780 LCA10Q71F78 164 aa4.44□□□□□ -1.7
SHROOM3-207ENST00000485780 MT1FP04733 61 aa4.42□□□□□ -1.7
SHROOM3-207ENST00000485780 Q1T7F1 81 aa4.42□□□□□ -1.7
SHROOM3-207ENST00000485780 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
SHROOM3-207ENST00000485780 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
SHROOM3-207ENST00000485780 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
SHROOM3-207ENST00000485780 COA5Q86WW8 74 aa4.39□□□□□ -1.71
SHROOM3-207ENST00000485780 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
SHROOM3-207ENST00000485780 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
SHROOM3-207ENST00000485780 ACYP2P14621 99 aa4.36□□□□□ -1.71
SHROOM3-207ENST00000485780 V9GYY9 64 aa4.35□□□□□ -1.71
SHROOM3-207ENST00000485780 H0YAA0 97 aa4.32□□□□□ -1.72
SHROOM3-207ENST00000485780 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
SHROOM3-207ENST00000485780 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
SHROOM3-207ENST00000485780 SEC61GP60059 68 aa4.28□□□□□ -1.72
SHROOM3-207ENST00000485780 Q5VV11 94 aa4.26□□□□□ -1.73
SHROOM3-207ENST00000485780 PSPHP1O15172 72 aa4.25□□□□□ -1.73
SHROOM3-207ENST00000485780 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
SHROOM3-207ENST00000485780 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
SHROOM3-207ENST00000485780 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
SHROOM3-207ENST00000485780 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
SHROOM3-207ENST00000485780 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
SHROOM3-207ENST00000485780 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
SHROOM3-207ENST00000485780 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
SHROOM3-207ENST00000485780 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
SHROOM3-207ENST00000485780 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
SHROOM3-207ENST00000485780 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
SHROOM3-207ENST00000485780 P0C880 135 aa4.16□□□□□ -1.74
SHROOM3-207ENST00000485780 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
SHROOM3-207ENST00000485780 MT1BP07438 61 aa4.13□□□□□ -1.75
SHROOM3-207ENST00000485780 A0A1B0GU69 56 aa4.12□□□□□ -1.75
SHROOM3-207ENST00000485780 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
SHROOM3-207ENST00000485780 A6NED7 52 aa4.1□□□□□ -1.75
SHROOM3-207ENST00000485780 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
SHROOM3-207ENST00000485780 A8MU10 97 aa4.09□□□□□ -1.75
SHROOM3-207ENST00000485780 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
SHROOM3-207ENST00000485780 R4GN34 69 aa4.08□□□□□ -1.76
SHROOM3-207ENST00000485780 A6NN06 94 aa4.06□□□□□ -1.76
SHROOM3-207ENST00000485780 M0QZ58 72 aa4.05□□□□□ -1.76
SHROOM3-207ENST00000485780 UQCR11O14957 56 aa4.05□□□□□ -1.76
SHROOM3-207ENST00000485780 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
SHROOM3-207ENST00000485780 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
SHROOM3-207ENST00000485780 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
SHROOM3-207ENST00000485780 A0A1B0GU33 70 aa3.99□□□□□ -1.77
SHROOM3-207ENST00000485780 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
SHROOM3-207ENST00000485780 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SHROOM3-207ENST00000485780 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SHROOM3-207ENST00000485780 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
SHROOM3-207ENST00000485780 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
SHROOM3-207ENST00000485780 MT1XP80297 61 aa3.92□□□□□ -1.78
SHROOM3-207ENST00000485780 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
SHROOM3-207ENST00000485780 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
SHROOM3-207ENST00000485780 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
SHROOM3-207ENST00000485780 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
SHROOM3-207ENST00000485780 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
SHROOM3-207ENST00000485780 A0A0D9SG42 100 aa3.82□□□□□ -1.8
SHROOM3-207ENST00000485780 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SHROOM3-207ENST00000485780 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
SHROOM3-207ENST00000485780 KMT2DO14686 5537 aa3.81□□□□□ -1.8
SHROOM3-207ENST00000485780 NEBP20929 6669 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms