RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
SMARCD3-211ENST00000485592 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
SMARCD3-211ENST00000485592 S4R3F8 94 aa6.15□□□□□ -1.42
SMARCD3-211ENST00000485592 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
SMARCD3-211ENST00000485592 UQCRQO14949 82 aa6.13□□□□□ -1.43
SMARCD3-211ENST00000485592 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
SMARCD3-211ENST00000485592 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
SMARCD3-211ENST00000485592 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
SMARCD3-211ENST00000485592 H0Y9P7 68 aa6.1□□□□□ -1.43
SMARCD3-211ENST00000485592 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
SMARCD3-211ENST00000485592 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
SMARCD3-211ENST00000485592 LCA10Q71F78 164 aa6.08□□□□□ -1.44
SMARCD3-211ENST00000485592 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
SMARCD3-211ENST00000485592 K7ERU9 68 aa6.06□□□□□ -1.44
SMARCD3-211ENST00000485592 ATOX1O00244 68 aa6.05□□□□□ -1.44
SMARCD3-211ENST00000485592 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
SMARCD3-211ENST00000485592 KMT2DO14686 5537 aa6.03□□□□□ -1.44
SMARCD3-211ENST00000485592 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
SMARCD3-211ENST00000485592 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
SMARCD3-211ENST00000485592 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
SMARCD3-211ENST00000485592 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
SMARCD3-211ENST00000485592 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
SMARCD3-211ENST00000485592 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SMARCD3-211ENST00000485592 MP68P56378 58 aa5.96□□□□□ -1.46
SMARCD3-211ENST00000485592 SCGB1A1P11684 91 aa5.94□□□□□ -1.46
SMARCD3-211ENST00000485592 H3BPC8 53 aa5.92□□□□□ -1.46
SMARCD3-211ENST00000485592 SPRR2EP22531 72 aa5.92□□□□□ -1.46
SMARCD3-211ENST00000485592 SPRR2BP35325 72 aa5.92□□□□□ -1.46
SMARCD3-211ENST00000485592 SPRR2AP35326 72 aa5.92□□□□□ -1.46
SMARCD3-211ENST00000485592 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
SMARCD3-211ENST00000485592 A8MUN3 132 aa5.89□□□□□ -1.47
SMARCD3-211ENST00000485592 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
SMARCD3-211ENST00000485592 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
SMARCD3-211ENST00000485592 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
SMARCD3-211ENST00000485592 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
SMARCD3-211ENST00000485592 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
SMARCD3-211ENST00000485592 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
SMARCD3-211ENST00000485592 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
SMARCD3-211ENST00000485592 H0YAA0 97 aa5.8□□□□□ -1.48
SMARCD3-211ENST00000485592 NDUFC1O43677 76 aa5.79□□□□□ -1.48
SMARCD3-211ENST00000485592 MT1XP80297 61 aa5.76□□□□□ -1.49
SMARCD3-211ENST00000485592 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
SMARCD3-211ENST00000485592 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
SMARCD3-211ENST00000485592 SERP2Q8N6R1 65 aa5.74□□□□□ -1.49
SMARCD3-211ENST00000485592 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
SMARCD3-211ENST00000485592 SPRR2DP22532 72 aa5.73□□□□□ -1.49
SMARCD3-211ENST00000485592 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
SMARCD3-211ENST00000485592 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
SMARCD3-211ENST00000485592 C20orf197Q8N268 126 aa5.7□□□□□ -1.5
SMARCD3-211ENST00000485592 ACYP2P14621 99 aa5.64□□□□□ -1.51
SMARCD3-211ENST00000485592 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
SMARCD3-211ENST00000485592 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
SMARCD3-211ENST00000485592 P0C880 135 aa5.63□□□□□ -1.51
SMARCD3-211ENST00000485592 R4GN34 69 aa5.63□□□□□ -1.51
SMARCD3-211ENST00000485592 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
SMARCD3-211ENST00000485592 COX7CP15954 63 aa5.61□□□□□ -1.51
SMARCD3-211ENST00000485592 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
SMARCD3-211ENST00000485592 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
SMARCD3-211ENST00000485592 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
SMARCD3-211ENST00000485592 M0QZ58 72 aa5.56□□□□□ -1.52
SMARCD3-211ENST00000485592 H7BZZ5 65 aa5.53□□□□□ -1.52
SMARCD3-211ENST00000485592 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
SMARCD3-211ENST00000485592 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
SMARCD3-211ENST00000485592 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
SMARCD3-211ENST00000485592 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
SMARCD3-211ENST00000485592 COA5Q86WW8 74 aa5.48□□□□□ -1.53
SMARCD3-211ENST00000485592 ANAPC13Q9BS18 74 aa5.48□□□□□ -1.53
SMARCD3-211ENST00000485592 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
SMARCD3-211ENST00000485592 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
SMARCD3-211ENST00000485592 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
SMARCD3-211ENST00000485592 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
SMARCD3-211ENST00000485592 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
SMARCD3-211ENST00000485592 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
SMARCD3-211ENST00000485592 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
SMARCD3-211ENST00000485592 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
SMARCD3-211ENST00000485592 SEC61GP60059 68 aa5.2□□□□□ -1.58
SMARCD3-211ENST00000485592 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
SMARCD3-211ENST00000485592 TMEM258P61165 79 aa5.19□□□□□ -1.58
SMARCD3-211ENST00000485592 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
SMARCD3-211ENST00000485592 A0A1B0GU33 70 aa5.17□□□□□ -1.58
SMARCD3-211ENST00000485592 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
SMARCD3-211ENST00000485592 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.59
SMARCD3-211ENST00000485592 A0A1B0GU69 56 aa5.14□□□□□ -1.59
SMARCD3-211ENST00000485592 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
SMARCD3-211ENST00000485592 A0A0D9SG42 100 aa5.13□□□□□ -1.59
SMARCD3-211ENST00000485592 MT1EP04732 61 aa5.13□□□□□ -1.59
SMARCD3-211ENST00000485592 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
SMARCD3-211ENST00000485592 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
SMARCD3-211ENST00000485592 LINC01558Q9Y6Z2 57 aa5.07□□□□□ -1.6
SMARCD3-211ENST00000485592 A8MU10 97 aa5.04□□□□□ -1.6
SMARCD3-211ENST00000485592 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
SMARCD3-211ENST00000485592 MT4P47944 62 aa5.03□□□□□ -1.6
SMARCD3-211ENST00000485592 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
SMARCD3-211ENST00000485592 MT1GP13640 62 aa5.01□□□□□ -1.61
SMARCD3-211ENST00000485592 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
SMARCD3-211ENST00000485592 PRR15LQ9BU68 103 aa5□□□□□ -1.61
SMARCD3-211ENST00000485592 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
SMARCD3-211ENST00000485592 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
SMARCD3-211ENST00000485592 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
SMARCD3-211ENST00000485592 MT1MQ8N339 61 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms