RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
APTX-226ENST00000483148 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
APTX-226ENST00000483148 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
APTX-226ENST00000483148 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
APTX-226ENST00000483148 ZNF861PO60384 105 aa5.85□□□□□ -1.47
APTX-226ENST00000483148 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
APTX-226ENST00000483148 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
APTX-226ENST00000483148 LRP2P98164 4655 aa5.8□□□□□ -1.48
APTX-226ENST00000483148 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
APTX-226ENST00000483148 PSORS1C2Q9UIG4 136 aa5.77□□□□□ -1.49
APTX-226ENST00000483148 TNXBP22105 4242 aa5.77□□□□□ -1.49
APTX-226ENST00000483148 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
APTX-226ENST00000483148 ROMO1P60602 79 aa5.74□□□□□ -1.49
APTX-226ENST00000483148 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
APTX-226ENST00000483148 A8MUU9 505 aa5.72□□□□□ -1.49
APTX-226ENST00000483148 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
APTX-226ENST00000483148 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
APTX-226ENST00000483148 KRTAP10-8P60410 259 aa5.65□□□□□ -1.5
APTX-226ENST00000483148 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
APTX-226ENST00000483148 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
APTX-226ENST00000483148 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.51
APTX-226ENST00000483148 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
APTX-226ENST00000483148 H0YAA0 97 aa5.61□□□□□ -1.51
APTX-226ENST00000483148 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
APTX-226ENST00000483148 K7ERS5 55 aa5.59□□□□□ -1.51
APTX-226ENST00000483148 XP32Q5T750 250 aa5.59□□□□□ -1.51
APTX-226ENST00000483148 A0A1B0GU33 70 aa5.58□□□□□ -1.52
APTX-226ENST00000483148 LPAP08519 4548 aa5.57□□□□□ -1.52
APTX-226ENST00000483148 SPINK1P00995 79 aa5.56□□□□□ -1.52
APTX-226ENST00000483148 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
APTX-226ENST00000483148 P0C880 135 aa5.52□□□□□ -1.53
APTX-226ENST00000483148 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
APTX-226ENST00000483148 MUC2Q02817 5179 aa5.48□□□□□ -1.53
APTX-226ENST00000483148 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
APTX-226ENST00000483148 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
APTX-226ENST00000483148 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
APTX-226ENST00000483148 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
APTX-226ENST00000483148 COX6B2Q6YFQ2 88 aa5.37□□□□□ -1.55
APTX-226ENST00000483148 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
APTX-226ENST00000483148 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
APTX-226ENST00000483148 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
APTX-226ENST00000483148 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
APTX-226ENST00000483148 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
APTX-226ENST00000483148 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
APTX-226ENST00000483148 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
APTX-226ENST00000483148 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
APTX-226ENST00000483148 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
APTX-226ENST00000483148 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
APTX-226ENST00000483148 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
APTX-226ENST00000483148 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
APTX-226ENST00000483148 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
APTX-226ENST00000483148 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
APTX-226ENST00000483148 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
APTX-226ENST00000483148 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
APTX-226ENST00000483148 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
APTX-226ENST00000483148 A0A0D9SG42 100 aa5.15□□□□□ -1.58
APTX-226ENST00000483148 KRTAP4-12Q9BQ66 201 aa5.15□□□□□ -1.58
APTX-226ENST00000483148 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
APTX-226ENST00000483148 S4R3F8 94 aa5.14□□□□□ -1.59
APTX-226ENST00000483148 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
APTX-226ENST00000483148 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
APTX-226ENST00000483148 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
APTX-226ENST00000483148 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
APTX-226ENST00000483148 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
APTX-226ENST00000483148 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
APTX-226ENST00000483148 MT1HP80294 61 aa5.02□□□□□ -1.61
APTX-226ENST00000483148 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
APTX-226ENST00000483148 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
APTX-226ENST00000483148 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
APTX-226ENST00000483148 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
APTX-226ENST00000483148 M0QZ58 72 aa4.99□□□□□ -1.61
APTX-226ENST00000483148 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
APTX-226ENST00000483148 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
APTX-226ENST00000483148 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
APTX-226ENST00000483148 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
APTX-226ENST00000483148 M0R2T5 61 aa4.85□□□□□ -1.63
APTX-226ENST00000483148 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
APTX-226ENST00000483148 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
APTX-226ENST00000483148 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
APTX-226ENST00000483148 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
APTX-226ENST00000483148 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
APTX-226ENST00000483148 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
APTX-226ENST00000483148 USH2AO75445 5202 aa4.75□□□□□ -1.65
APTX-226ENST00000483148 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
APTX-226ENST00000483148 R4GN34 69 aa4.68□□□□□ -1.66
APTX-226ENST00000483148 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
APTX-226ENST00000483148 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
APTX-226ENST00000483148 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
APTX-226ENST00000483148 MT2AP02795 61 aa4.6□□□□□ -1.67
APTX-226ENST00000483148 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
APTX-226ENST00000483148 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
APTX-226ENST00000483148 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
APTX-226ENST00000483148 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
APTX-226ENST00000483148 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
APTX-226ENST00000483148 MT1FP04733 61 aa4.57□□□□□ -1.68
APTX-226ENST00000483148 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.69
APTX-226ENST00000483148 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
APTX-226ENST00000483148 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
APTX-226ENST00000483148 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
APTX-226ENST00000483148 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms