RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 ATOX1O00244 68 aa7.61□□□□□ -1.19
VAMP4-204ENST00000482519 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
VAMP4-204ENST00000482519 LINC00208Q96KT6 92 aa7.53□□□□□ -1.2
VAMP4-204ENST00000482519 J3QR89 54 aa7.52□□□□□ -1.21
VAMP4-204ENST00000482519 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
VAMP4-204ENST00000482519 MP68P56378 58 aa7.5□□□□□ -1.21
VAMP4-204ENST00000482519 OCR1Q9BZK8 76 aa7.48□□□□□ -1.21
VAMP4-204ENST00000482519 KLKP1Q107X0 134 aa7.47□□□□□ -1.21
VAMP4-204ENST00000482519 KRTAP4-12Q9BQ66 201 aa7.47□□□□□ -1.21
VAMP4-204ENST00000482519 MACF1Q9UPN3 7388 aaKnown RBP7.46□□□□□ -1.21
VAMP4-204ENST00000482519 NDUFC1O43677 76 aa7.46□□□□□ -1.22
VAMP4-204ENST00000482519 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
VAMP4-204ENST00000482519 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
VAMP4-204ENST00000482519 A8MUN3 132 aa7.42□□□□□ -1.22
VAMP4-204ENST00000482519 Q5VV11 94 aa7.42□□□□□ -1.22
VAMP4-204ENST00000482519 H3BS24 57 aa7.4□□□□□ -1.22
VAMP4-204ENST00000482519 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
VAMP4-204ENST00000482519 MT1BP07438 61 aa7.38□□□□□ -1.23
VAMP4-204ENST00000482519 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
VAMP4-204ENST00000482519 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
VAMP4-204ENST00000482519 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
VAMP4-204ENST00000482519 A6NN06 94 aa7.33□□□□□ -1.24
VAMP4-204ENST00000482519 H3BPC8 53 aa7.33□□□□□ -1.24
VAMP4-204ENST00000482519 H0YAA0 97 aa7.31□□□□□ -1.24
VAMP4-204ENST00000482519 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
VAMP4-204ENST00000482519 MT-ATP8P03928 68 aa7.27□□□□□ -1.25
VAMP4-204ENST00000482519 K7ERU9 68 aa7.26□□□□□ -1.25
VAMP4-204ENST00000482519 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
VAMP4-204ENST00000482519 KRTAP9-9Q9BYP9 154 aa7.23□□□□□ -1.25
VAMP4-204ENST00000482519 KRTAP9-4Q9BYQ2 154 aa7.23□□□□□ -1.25
VAMP4-204ENST00000482519 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
VAMP4-204ENST00000482519 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
VAMP4-204ENST00000482519 SMIM20Q8N5G0 67 aa7.17□□□□□ -1.26
VAMP4-204ENST00000482519 NEBP20929 6669 aa7.16□□□□□ -1.26
VAMP4-204ENST00000482519 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
VAMP4-204ENST00000482519 P0C880 135 aa7.12□□□□□ -1.27
VAMP4-204ENST00000482519 C20orf197Q8N268 126 aa7.12□□□□□ -1.27
VAMP4-204ENST00000482519 R4GN34 69 aa7.11□□□□□ -1.27
VAMP4-204ENST00000482519 ACYP2P14621 99 aa7.1□□□□□ -1.27
VAMP4-204ENST00000482519 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
VAMP4-204ENST00000482519 M0QZ58 72 aa7.07□□□□□ -1.28
VAMP4-204ENST00000482519 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
VAMP4-204ENST00000482519 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
VAMP4-204ENST00000482519 CHKB-CPT1BH3BT56 60 aa7.01□□□□□ -1.29
VAMP4-204ENST00000482519 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
VAMP4-204ENST00000482519 SPTSSBQ8NFR3 76 aa7.01□□□□□ -1.29
VAMP4-204ENST00000482519 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
VAMP4-204ENST00000482519 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
VAMP4-204ENST00000482519 MT1XP80297 61 aa6.95□□□□□ -1.3
VAMP4-204ENST00000482519 SERP2Q8N6R1 65 aa6.94□□□□□ -1.3
VAMP4-204ENST00000482519 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
VAMP4-204ENST00000482519 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
VAMP4-204ENST00000482519 KMT2DO14686 5537 aa6.88□□□□□ -1.31
VAMP4-204ENST00000482519 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
VAMP4-204ENST00000482519 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
VAMP4-204ENST00000482519 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
VAMP4-204ENST00000482519 KRTAP4-7Q9BYR0 210 aa6.82□□□□□ -1.32
VAMP4-204ENST00000482519 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
VAMP4-204ENST00000482519 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
VAMP4-204ENST00000482519 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
VAMP4-204ENST00000482519 COA5Q86WW8 74 aa6.74□□□□□ -1.33
VAMP4-204ENST00000482519 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
VAMP4-204ENST00000482519 COX7CP15954 63 aa6.73□□□□□ -1.33
VAMP4-204ENST00000482519 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
VAMP4-204ENST00000482519 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
VAMP4-204ENST00000482519 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
VAMP4-204ENST00000482519 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
VAMP4-204ENST00000482519 SEC61GP60059 68 aa6.64□□□□□ -1.35
VAMP4-204ENST00000482519 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
VAMP4-204ENST00000482519 SPRR2EP22531 72 aa6.63□□□□□ -1.35
VAMP4-204ENST00000482519 SPRR2BP35325 72 aa6.63□□□□□ -1.35
VAMP4-204ENST00000482519 SPRR2AP35326 72 aa6.63□□□□□ -1.35
VAMP4-204ENST00000482519 H7BZZ5 65 aa6.62□□□□□ -1.35
VAMP4-204ENST00000482519 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
VAMP4-204ENST00000482519 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
VAMP4-204ENST00000482519 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
VAMP4-204ENST00000482519 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
VAMP4-204ENST00000482519 A0A0D9SG42 100 aa6.54□□□□□ -1.36
VAMP4-204ENST00000482519 KRTAP4-2Q9BYR5 136 aa6.53□□□□□ -1.36
VAMP4-204ENST00000482519 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
VAMP4-204ENST00000482519 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
VAMP4-204ENST00000482519 A0A1B0GU33 70 aa6.5□□□□□ -1.37
VAMP4-204ENST00000482519 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
VAMP4-204ENST00000482519 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
VAMP4-204ENST00000482519 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
VAMP4-204ENST00000482519 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
VAMP4-204ENST00000482519 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
VAMP4-204ENST00000482519 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
VAMP4-204ENST00000482519 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
VAMP4-204ENST00000482519 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
VAMP4-204ENST00000482519 A0A1B0GU69 56 aa6.41□□□□□ -1.38
VAMP4-204ENST00000482519 SPRR2DP22532 72 aa6.41□□□□□ -1.38
VAMP4-204ENST00000482519 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
VAMP4-204ENST00000482519 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
VAMP4-204ENST00000482519 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
VAMP4-204ENST00000482519 A8MU10 97 aa6.28□□□□□ -1.4
VAMP4-204ENST00000482519 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
VAMP4-204ENST00000482519 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
VAMP4-204ENST00000482519 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
VAMP4-204ENST00000482519 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms