RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 LCA10Q71F78 164 aa5.5□□□□□ -1.53
HMGN1-213ENST00000482192 H3BS24 57 aa5.49□□□□□ -1.53
HMGN1-213ENST00000482192 UQCRQO14949 82 aa5.49□□□□□ -1.53
HMGN1-213ENST00000482192 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
HMGN1-213ENST00000482192 LINC00643Q86TS7 51 aa5.49□□□□□ -1.53
HMGN1-213ENST00000482192 FAM236AA0A1B0GUQ0 79 aa5.47□□□□□ -1.53
HMGN1-213ENST00000482192 FAM236BA0A1B0GV22 79 aa5.47□□□□□ -1.53
HMGN1-213ENST00000482192 ATOX1O00244 68 aa5.47□□□□□ -1.53
HMGN1-213ENST00000482192 A0A1B0GV90 55 aa5.46□□□□□ -1.54
HMGN1-213ENST00000482192 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
HMGN1-213ENST00000482192 A0A087WVE0 104 aa5.45□□□□□ -1.54
HMGN1-213ENST00000482192 H0Y9P7 68 aa5.45□□□□□ -1.54
HMGN1-213ENST00000482192 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
HMGN1-213ENST00000482192 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-213ENST00000482192 J3QR89 54 aa5.37□□□□□ -1.55
HMGN1-213ENST00000482192 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
HMGN1-213ENST00000482192 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
HMGN1-213ENST00000482192 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
HMGN1-213ENST00000482192 MP68P56378 58 aa5.36□□□□□ -1.55
HMGN1-213ENST00000482192 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
HMGN1-213ENST00000482192 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
HMGN1-213ENST00000482192 A8MUN3 132 aa5.35□□□□□ -1.55
HMGN1-213ENST00000482192 NDUFC1O43677 76 aa5.34□□□□□ -1.55
HMGN1-213ENST00000482192 Q5VV11 94 aa5.34□□□□□ -1.55
HMGN1-213ENST00000482192 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
HMGN1-213ENST00000482192 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
HMGN1-213ENST00000482192 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
HMGN1-213ENST00000482192 MT1BP07438 61 aa5.31□□□□□ -1.56
HMGN1-213ENST00000482192 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
HMGN1-213ENST00000482192 H0YAA0 97 aa5.29□□□□□ -1.56
HMGN1-213ENST00000482192 H3BPC8 53 aa5.28□□□□□ -1.56
HMGN1-213ENST00000482192 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
HMGN1-213ENST00000482192 SCGB1A1P11684 91 aa5.27□□□□□ -1.57
HMGN1-213ENST00000482192 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
HMGN1-213ENST00000482192 A6NN06 94 aa5.26□□□□□ -1.57
HMGN1-213ENST00000482192 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
HMGN1-213ENST00000482192 ADM2Q7Z4H4 148 aa5.22□□□□□ -1.57
HMGN1-213ENST00000482192 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
HMGN1-213ENST00000482192 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
HMGN1-213ENST00000482192 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
HMGN1-213ENST00000482192 K7ERU9 68 aa5.17□□□□□ -1.58
HMGN1-213ENST00000482192 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
HMGN1-213ENST00000482192 SMIM20Q8N5G0 67 aa5.14□□□□□ -1.59
HMGN1-213ENST00000482192 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
HMGN1-213ENST00000482192 TRAV7A0A075B6U4 112 aa5.12□□□□□ -1.59
HMGN1-213ENST00000482192 R4GN34 69 aa5.1□□□□□ -1.59
HMGN1-213ENST00000482192 P0C880 135 aa5.09□□□□□ -1.59
HMGN1-213ENST00000482192 ACYP2P14621 99 aa5.07□□□□□ -1.6
HMGN1-213ENST00000482192 M0QZ58 72 aa5.05□□□□□ -1.6
HMGN1-213ENST00000482192 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
HMGN1-213ENST00000482192 PRO2289Q9P1D8 64 aa5.04□□□□□ -1.6
HMGN1-213ENST00000482192 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
HMGN1-213ENST00000482192 SNURFQ9Y675 71 aa5□□□□□ -1.61
HMGN1-213ENST00000482192 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
HMGN1-213ENST00000482192 MT1XP80297 61 aa4.99□□□□□ -1.61
HMGN1-213ENST00000482192 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
HMGN1-213ENST00000482192 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
HMGN1-213ENST00000482192 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
HMGN1-213ENST00000482192 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
HMGN1-213ENST00000482192 NEBP20929 6669 aa4.95□□□□□ -1.62
HMGN1-213ENST00000482192 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
HMGN1-213ENST00000482192 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
HMGN1-213ENST00000482192 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
HMGN1-213ENST00000482192 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
HMGN1-213ENST00000482192 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
HMGN1-213ENST00000482192 KMT2DO14686 5537 aa4.81□□□□□ -1.64
HMGN1-213ENST00000482192 COX7CP15954 63 aa4.8□□□□□ -1.64
HMGN1-213ENST00000482192 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
HMGN1-213ENST00000482192 COA5Q86WW8 74 aa4.8□□□□□ -1.64
HMGN1-213ENST00000482192 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
HMGN1-213ENST00000482192 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
HMGN1-213ENST00000482192 SPRR2EP22531 72 aa4.75□□□□□ -1.65
HMGN1-213ENST00000482192 SPRR2BP35325 72 aa4.75□□□□□ -1.65
HMGN1-213ENST00000482192 SPRR2AP35326 72 aa4.75□□□□□ -1.65
HMGN1-213ENST00000482192 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
HMGN1-213ENST00000482192 SEC61GP60059 68 aa4.74□□□□□ -1.65
HMGN1-213ENST00000482192 H7BZZ5 65 aa4.72□□□□□ -1.65
HMGN1-213ENST00000482192 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
HMGN1-213ENST00000482192 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
HMGN1-213ENST00000482192 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
HMGN1-213ENST00000482192 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
HMGN1-213ENST00000482192 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
HMGN1-213ENST00000482192 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
HMGN1-213ENST00000482192 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
HMGN1-213ENST00000482192 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.67
HMGN1-213ENST00000482192 A0A1B0GU33 70 aa4.64□□□□□ -1.67
HMGN1-213ENST00000482192 A0A0D9SG42 100 aa4.63□□□□□ -1.67
HMGN1-213ENST00000482192 SPATA8Q6RVD6 105 aa4.62□□□□□ -1.67
HMGN1-213ENST00000482192 SPRR2DP22532 72 aa4.6□□□□□ -1.67
HMGN1-213ENST00000482192 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
HMGN1-213ENST00000482192 A0A1B0GU69 56 aa4.58□□□□□ -1.68
HMGN1-213ENST00000482192 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
HMGN1-213ENST00000482192 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
HMGN1-213ENST00000482192 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
HMGN1-213ENST00000482192 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
HMGN1-213ENST00000482192 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
HMGN1-213ENST00000482192 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
HMGN1-213ENST00000482192 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
HMGN1-213ENST00000482192 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
HMGN1-213ENST00000482192 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms