RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PRR4Q16378 134 aa6.64□□□□□ -1.35
HPS4-212ENST00000481910 RPS29P62273 56 aaKnown RBP6.63□□□□□ -1.35
HPS4-212ENST00000481910 TNXBP22105 4242 aa6.61□□□□□ -1.35
HPS4-212ENST00000481910 K7ERS5 55 aa6.6□□□□□ -1.35
HPS4-212ENST00000481910 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
HPS4-212ENST00000481910 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
HPS4-212ENST00000481910 P0C880 135 aa6.56□□□□□ -1.36
HPS4-212ENST00000481910 Q8N9L7 120 aa6.56□□□□□ -1.36
HPS4-212ENST00000481910 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
HPS4-212ENST00000481910 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
HPS4-212ENST00000481910 UQCR11O14957 56 aa6.52□□□□□ -1.37
HPS4-212ENST00000481910 A8MWP4 228 aa6.5□□□□□ -1.37
HPS4-212ENST00000481910 C20orf166-AS1Q96NR2 134 aa6.5□□□□□ -1.37
HPS4-212ENST00000481910 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
HPS4-212ENST00000481910 Q96NJ1 140 aa6.47□□□□□ -1.37
HPS4-212ENST00000481910 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.37
HPS4-212ENST00000481910 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.37
HPS4-212ENST00000481910 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
HPS4-212ENST00000481910 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
HPS4-212ENST00000481910 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
HPS4-212ENST00000481910 HERC1Q15751 4861 aa6.42□□□□□ -1.38
HPS4-212ENST00000481910 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
HPS4-212ENST00000481910 DSCR10P59022 87 aa6.4□□□□□ -1.39
HPS4-212ENST00000481910 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.39
HPS4-212ENST00000481910 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.39
HPS4-212ENST00000481910 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
HPS4-212ENST00000481910 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
HPS4-212ENST00000481910 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
HPS4-212ENST00000481910 HRES1P13985 223 aa6.34□□□□□ -1.39
HPS4-212ENST00000481910 A8MUU9 505 aa6.33□□□□□ -1.4
HPS4-212ENST00000481910 K7EQZ3 153 aa6.33□□□□□ -1.4
HPS4-212ENST00000481910 A0A1B0GU69 56 aa6.31□□□□□ -1.4
HPS4-212ENST00000481910 Q5W150 140 aa6.31□□□□□ -1.4
HPS4-212ENST00000481910 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
HPS4-212ENST00000481910 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
HPS4-212ENST00000481910 LPAP08519 4548 aa6.28□□□□□ -1.4
HPS4-212ENST00000481910 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
HPS4-212ENST00000481910 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
HPS4-212ENST00000481910 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
HPS4-212ENST00000481910 ACYP2P14621 99 aa6.23□□□□□ -1.41
HPS4-212ENST00000481910 RPL37P61927 97 aaKnown RBP6.23□□□□□ -1.41
HPS4-212ENST00000481910 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
HPS4-212ENST00000481910 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
HPS4-212ENST00000481910 LRP2P98164 4655 aa6.21□□□□□ -1.41
HPS4-212ENST00000481910 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
HPS4-212ENST00000481910 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
HPS4-212ENST00000481910 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
HPS4-212ENST00000481910 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
HPS4-212ENST00000481910 LCE1DQ5T752 114 aa6.15□□□□□ -1.43
HPS4-212ENST00000481910 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
HPS4-212ENST00000481910 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
HPS4-212ENST00000481910 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
HPS4-212ENST00000481910 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
HPS4-212ENST00000481910 KRTAP5-3Q6L8H2 238 aa6.06□□□□□ -1.44
HPS4-212ENST00000481910 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
HPS4-212ENST00000481910 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
HPS4-212ENST00000481910 MUC17Q685J3 4493 aa5.99□□□□□ -1.45
HPS4-212ENST00000481910 MUC2Q02817 5179 aa5.97□□□□□ -1.45
HPS4-212ENST00000481910 RNF213Q63HN8 5207 aa5.96□□□□□ -1.45
HPS4-212ENST00000481910 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
HPS4-212ENST00000481910 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
HPS4-212ENST00000481910 A0A1B0GU33 70 aa5.93□□□□□ -1.46
HPS4-212ENST00000481910 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
HPS4-212ENST00000481910 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
HPS4-212ENST00000481910 H0YAA0 97 aa5.78□□□□□ -1.48
HPS4-212ENST00000481910 MT1HP80294 61 aa5.74□□□□□ -1.49
HPS4-212ENST00000481910 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
HPS4-212ENST00000481910 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
HPS4-212ENST00000481910 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
HPS4-212ENST00000481910 M0R2T5 61 aa5.71□□□□□ -1.5
HPS4-212ENST00000481910 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
HPS4-212ENST00000481910 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
HPS4-212ENST00000481910 S4R3F8 94 aa5.62□□□□□ -1.51
HPS4-212ENST00000481910 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
HPS4-212ENST00000481910 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
HPS4-212ENST00000481910 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
HPS4-212ENST00000481910 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
HPS4-212ENST00000481910 R4GN34 69 aa5.5□□□□□ -1.53
HPS4-212ENST00000481910 MT2AP02795 61 aa5.44□□□□□ -1.54
HPS4-212ENST00000481910 INE1O15225 51 aa5.44□□□□□ -1.54
HPS4-212ENST00000481910 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
HPS4-212ENST00000481910 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
HPS4-212ENST00000481910 MT1FP04733 61 aa5.4□□□□□ -1.54
HPS4-212ENST00000481910 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
HPS4-212ENST00000481910 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
HPS4-212ENST00000481910 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
HPS4-212ENST00000481910 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
HPS4-212ENST00000481910 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
HPS4-212ENST00000481910 M0QZ58 72 aa5.16□□□□□ -1.58
HPS4-212ENST00000481910 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
HPS4-212ENST00000481910 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
HPS4-212ENST00000481910 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
HPS4-212ENST00000481910 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
HPS4-212ENST00000481910 MT1BP07438 61 aa5.05□□□□□ -1.6
HPS4-212ENST00000481910 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
HPS4-212ENST00000481910 USH2AO75445 5202 aa5.03□□□□□ -1.6
HPS4-212ENST00000481910 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
HPS4-212ENST00000481910 A0A0D9SG42 100 aa5.01□□□□□ -1.61
HPS4-212ENST00000481910 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
HPS4-212ENST00000481910 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms