RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 CDC42SE1Q9NRR8 79 aa10.16□□□□□ -0.78
CHKB-209ENST00000481673 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
CHKB-209ENST00000481673 LCA10Q71F78 164 aa10.1□□□□□ -0.79
CHKB-209ENST00000481673 RBM12B-AS1Q9P1G2 102 aa10.1□□□□□ -0.79
CHKB-209ENST00000481673 UQCR11O14957 56 aa10.09□□□□□ -0.79
CHKB-209ENST00000481673 H1FX-AS1Q4G0G2 97 aa10.07□□□□□ -0.8
CHKB-209ENST00000481673 LRP2P98164 4655 aa10.07□□□□□ -0.8
CHKB-209ENST00000481673 S4R3F8 94 aa10.04□□□□□ -0.8
CHKB-209ENST00000481673 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
CHKB-209ENST00000481673 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
CHKB-209ENST00000481673 LPAP08519 4548 aa9.97□□□□□ -0.81
CHKB-209ENST00000481673 A8MU10 97 aa9.97□□□□□ -0.81
CHKB-209ENST00000481673 MIR22HGQ0VDD5 57 aa9.96□□□□□ -0.81
CHKB-209ENST00000481673 A0A1B0GU33 70 aa9.89□□□□□ -0.83
CHKB-209ENST00000481673 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
CHKB-209ENST00000481673 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
CHKB-209ENST00000481673 KRTAP10-6P60371 365 aaPredicted RBP9.74□□□□□ -0.85
CHKB-209ENST00000481673 KRTAP4-1Q9BYQ7 146 aa9.73□□□□□ -0.85
CHKB-209ENST00000481673 A6NN06 94 aa9.72□□□□□ -0.85
CHKB-209ENST00000481673 H0YAA0 97 aa9.72□□□□□ -0.85
CHKB-209ENST00000481673 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.85
CHKB-209ENST00000481673 MUC17Q685J3 4493 aa9.71□□□□□ -0.86
CHKB-209ENST00000481673 PCLOQ9Y6V0 5065 aa9.7□□□□□ -0.86
CHKB-209ENST00000481673 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
CHKB-209ENST00000481673 HERC1Q15751 4861 aa9.6□□□□□ -0.87
CHKB-209ENST00000481673 HMCN2Q8NDA2 5059 aa9.59□□□□□ -0.87
CHKB-209ENST00000481673 P0C880 135 aa9.57□□□□□ -0.88
CHKB-209ENST00000481673 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
CHKB-209ENST00000481673 KTN1-AS1Q86SY8 53 aa9.55□□□□□ -0.88
CHKB-209ENST00000481673 K7ERS5 55 aa9.54□□□□□ -0.88
CHKB-209ENST00000481673 M0QZ58 72 aa9.5□□□□□ -0.89
CHKB-209ENST00000481673 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.9
CHKB-209ENST00000481673 A0A0D9SG42 100 aa9.35□□□□□ -0.91
CHKB-209ENST00000481673 MUC2Q02817 5179 aa9.34□□□□□ -0.91
CHKB-209ENST00000481673 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
CHKB-209ENST00000481673 R4GN34 69 aa9.31□□□□□ -0.92
CHKB-209ENST00000481673 LCE2CQ5TA81 110 aa9.21□□□□□ -0.93
CHKB-209ENST00000481673 KRTAP12-1P59990 96 aa9.18□□□□□ -0.94
CHKB-209ENST00000481673 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
CHKB-209ENST00000481673 KRTAP12-2P59991 146 aa9.15□□□□□ -0.95
CHKB-209ENST00000481673 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.95
CHKB-209ENST00000481673 ROMO1P60602 79 aa9.13□□□□□ -0.95
CHKB-209ENST00000481673 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
CHKB-209ENST00000481673 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
CHKB-209ENST00000481673 LINC01554Q52M75 96 aa9.08□□□□□ -0.96
CHKB-209ENST00000481673 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
CHKB-209ENST00000481673 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
CHKB-209ENST00000481673 M0R2T5 61 aa9.03□□□□□ -0.96
CHKB-209ENST00000481673 MT1HP80294 61 aa9.02□□□□□ -0.96
CHKB-209ENST00000481673 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
CHKB-209ENST00000481673 KRTAP25-1Q3LHN0 102 aa8.9□□□□□ -0.98
CHKB-209ENST00000481673 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
CHKB-209ENST00000481673 CAMK2N1Q7Z7J9 78 aa8.76□□□□□ -1.01
CHKB-209ENST00000481673 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
CHKB-209ENST00000481673 MT2AP02795 61 aa8.74□□□□□ -1.01
CHKB-209ENST00000481673 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
CHKB-209ENST00000481673 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
CHKB-209ENST00000481673 MT1FP04733 61 aa8.68□□□□□ -1.02
CHKB-209ENST00000481673 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
CHKB-209ENST00000481673 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
CHKB-209ENST00000481673 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
CHKB-209ENST00000481673 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
CHKB-209ENST00000481673 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
CHKB-209ENST00000481673 PP632Q6XCG6 107 aa8.42□□□□□ -1.06
CHKB-209ENST00000481673 TNP1P09430 55 aa8.41□□□□□ -1.06
CHKB-209ENST00000481673 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.07
CHKB-209ENST00000481673 MT1BP07438 61 aa8.31□□□□□ -1.08
CHKB-209ENST00000481673 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
CHKB-209ENST00000481673 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
CHKB-209ENST00000481673 MT1XP80297 61 aa8.12□□□□□ -1.11
CHKB-209ENST00000481673 LCE2BO14633 110 aa8.09□□□□□ -1.11
CHKB-209ENST00000481673 H3BS24 57 aa8.01□□□□□ -1.13
CHKB-209ENST00000481673 KRTAP15-1Q3LI76 137 aa7.94□□□□□ -1.14
CHKB-209ENST00000481673 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
CHKB-209ENST00000481673 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
CHKB-209ENST00000481673 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
CHKB-209ENST00000481673 KRTAP10-7P60409 375 aaPredicted RBP7.79□□□□□ -1.16
CHKB-209ENST00000481673 USH2AO75445 5202 aa7.76□□□□□ -1.17
CHKB-209ENST00000481673 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
CHKB-209ENST00000481673 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
CHKB-209ENST00000481673 KRTAP19-6Q3LI70 58 aa7.58□□□□□ -1.2
CHKB-209ENST00000481673 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
CHKB-209ENST00000481673 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
CHKB-209ENST00000481673 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
CHKB-209ENST00000481673 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
CHKB-209ENST00000481673 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
CHKB-209ENST00000481673 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
CHKB-209ENST00000481673 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
CHKB-209ENST00000481673 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
CHKB-209ENST00000481673 KRTAP19-7Q3SYF9 63 aa7.24□□□□□ -1.25
CHKB-209ENST00000481673 KMT2DO14686 5537 aa7.22□□□□□ -1.25
CHKB-209ENST00000481673 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
CHKB-209ENST00000481673 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.26
CHKB-209ENST00000481673 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
CHKB-209ENST00000481673 MT1EP04732 61 aa7.11□□□□□ -1.27
CHKB-209ENST00000481673 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.28
CHKB-209ENST00000481673 MT1LQ93083 61 aa7.02□□□□□ -1.29
CHKB-209ENST00000481673 CRCT1Q9UGL9 99 aa6.87□□□□□ -1.31
CHKB-209ENST00000481673 MT1GP13640 62 aa6.8□□□□□ -1.32
CHKB-209ENST00000481673 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms