RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 XP32Q5T750 250 aa7.32□□□□□ -1.24
PHF3-204ENST00000481385 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
PHF3-204ENST00000481385 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
PHF3-204ENST00000481385 SEC61GP60059 68 aa7.3□□□□□ -1.24
PHF3-204ENST00000481385 ABCA13Q86UQ4 5058 aa7.27□□□□□ -1.25
PHF3-204ENST00000481385 LRP2P98164 4655 aa7.27□□□□□ -1.25
PHF3-204ENST00000481385 H0YAA0 97 aa7.26□□□□□ -1.25
PHF3-204ENST00000481385 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
PHF3-204ENST00000481385 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
PHF3-204ENST00000481385 A0A1B0GU33 70 aa7.19□□□□□ -1.26
PHF3-204ENST00000481385 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
PHF3-204ENST00000481385 RBM12B-AS1Q9P1G2 102 aa7.19□□□□□ -1.26
PHF3-204ENST00000481385 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
PHF3-204ENST00000481385 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
PHF3-204ENST00000481385 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
PHF3-204ENST00000481385 S4R3F8 94 aa7.08□□□□□ -1.28
PHF3-204ENST00000481385 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
PHF3-204ENST00000481385 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
PHF3-204ENST00000481385 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
PHF3-204ENST00000481385 P0C880 135 aa6.98□□□□□ -1.29
PHF3-204ENST00000481385 HERC2O95714 4834 aa6.97□□□□□ -1.29
PHF3-204ENST00000481385 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
PHF3-204ENST00000481385 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
PHF3-204ENST00000481385 A0A0D9SG42 100 aa6.91□□□□□ -1.3
PHF3-204ENST00000481385 K7ERS5 55 aa6.83□□□□□ -1.32
PHF3-204ENST00000481385 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
PHF3-204ENST00000481385 MUC2Q02817 5179 aa6.82□□□□□ -1.32
PHF3-204ENST00000481385 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
PHF3-204ENST00000481385 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
PHF3-204ENST00000481385 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
PHF3-204ENST00000481385 J3QL48 77 aa6.77□□□□□ -1.33
PHF3-204ENST00000481385 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
PHF3-204ENST00000481385 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
PHF3-204ENST00000481385 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
PHF3-204ENST00000481385 ROMO1P60602 79 aa6.73□□□□□ -1.33
PHF3-204ENST00000481385 HERC1Q15751 4861 aa6.72□□□□□ -1.33
PHF3-204ENST00000481385 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
PHF3-204ENST00000481385 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
PHF3-204ENST00000481385 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
PHF3-204ENST00000481385 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
PHF3-204ENST00000481385 M0QZ58 72 aa6.65□□□□□ -1.35
PHF3-204ENST00000481385 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
PHF3-204ENST00000481385 HMCN2Q8NDA2 5059 aa6.61□□□□□ -1.35
PHF3-204ENST00000481385 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
PHF3-204ENST00000481385 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
PHF3-204ENST00000481385 R4GN34 69 aa6.56□□□□□ -1.36
PHF3-204ENST00000481385 FAT4Q6V0I7 4981 aa6.49□□□□□ -1.37
PHF3-204ENST00000481385 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
PHF3-204ENST00000481385 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
PHF3-204ENST00000481385 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
PHF3-204ENST00000481385 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
PHF3-204ENST00000481385 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
PHF3-204ENST00000481385 MT1HP80294 61 aa6.13□□□□□ -1.43
PHF3-204ENST00000481385 M0R2T5 61 aa6.08□□□□□ -1.44
PHF3-204ENST00000481385 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
PHF3-204ENST00000481385 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
PHF3-204ENST00000481385 H3BS24 57 aa6.02□□□□□ -1.45
PHF3-204ENST00000481385 MT1FP04733 61 aa6.02□□□□□ -1.45
PHF3-204ENST00000481385 MT2AP02795 61 aa6.01□□□□□ -1.45
PHF3-204ENST00000481385 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
PHF3-204ENST00000481385 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
PHF3-204ENST00000481385 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
PHF3-204ENST00000481385 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
PHF3-204ENST00000481385 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
PHF3-204ENST00000481385 TNP1P09430 55 aa5.93□□□□□ -1.46
PHF3-204ENST00000481385 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
PHF3-204ENST00000481385 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
PHF3-204ENST00000481385 MT1BP07438 61 aa5.78□□□□□ -1.48
PHF3-204ENST00000481385 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
PHF3-204ENST00000481385 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
PHF3-204ENST00000481385 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PHF3-204ENST00000481385 MT1XP80297 61 aa5.71□□□□□ -1.5
PHF3-204ENST00000481385 USH2AO75445 5202 aa5.64□□□□□ -1.51
PHF3-204ENST00000481385 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
PHF3-204ENST00000481385 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
PHF3-204ENST00000481385 LCE2BO14633 110 aa5.55□□□□□ -1.52
PHF3-204ENST00000481385 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
PHF3-204ENST00000481385 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
PHF3-204ENST00000481385 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
PHF3-204ENST00000481385 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
PHF3-204ENST00000481385 KMT2DO14686 5537 aa5.47□□□□□ -1.53
PHF3-204ENST00000481385 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
PHF3-204ENST00000481385 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
PHF3-204ENST00000481385 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
PHF3-204ENST00000481385 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
PHF3-204ENST00000481385 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
PHF3-204ENST00000481385 SSPOA2VEC9 5147 aa5.21□□□□□ -1.57
PHF3-204ENST00000481385 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
PHF3-204ENST00000481385 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
PHF3-204ENST00000481385 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
PHF3-204ENST00000481385 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
PHF3-204ENST00000481385 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
PHF3-204ENST00000481385 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
PHF3-204ENST00000481385 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
PHF3-204ENST00000481385 MT1EP04732 61 aa4.94□□□□□ -1.62
PHF3-204ENST00000481385 MT1LQ93083 61 aa4.92□□□□□ -1.62
PHF3-204ENST00000481385 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
PHF3-204ENST00000481385 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
PHF3-204ENST00000481385 LCE2DQ5TA82 110 aaPredicted RBP4.76□□□□□ -1.65
PHF3-204ENST00000481385 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms