RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
TDP2-205ENST00000480495 KLKP1Q107X0 134 aa6.76□□□□□ -1.33
TDP2-205ENST00000480495 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
TDP2-205ENST00000480495 Q5VV11 94 aa6.75□□□□□ -1.33
TDP2-205ENST00000480495 A0A087WVE0 104 aa6.74□□□□□ -1.33
TDP2-205ENST00000480495 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
TDP2-205ENST00000480495 MT1BP07438 61 aa6.73□□□□□ -1.33
TDP2-205ENST00000480495 IMUPQ9GZP8 106 aa6.72□□□□□ -1.33
TDP2-205ENST00000480495 A8MUN3 132 aa6.69□□□□□ -1.34
TDP2-205ENST00000480495 NDUFC1O43677 76 aa6.69□□□□□ -1.34
TDP2-205ENST00000480495 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
TDP2-205ENST00000480495 A6NN06 94 aa6.68□□□□□ -1.34
TDP2-205ENST00000480495 LINC00208Q96KT6 92 aa6.67□□□□□ -1.34
TDP2-205ENST00000480495 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
TDP2-205ENST00000480495 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.34
TDP2-205ENST00000480495 H0YAA0 97 aa6.65□□□□□ -1.34
TDP2-205ENST00000480495 PCP4P48539 62 aa6.65□□□□□ -1.34
TDP2-205ENST00000480495 MP68P56378 58 aa6.65□□□□□ -1.34
TDP2-205ENST00000480495 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
TDP2-205ENST00000480495 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
TDP2-205ENST00000480495 SCGB1A1P11684 91 aa6.59□□□□□ -1.35
TDP2-205ENST00000480495 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
TDP2-205ENST00000480495 H3BPC8 53 aa6.57□□□□□ -1.36
TDP2-205ENST00000480495 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
TDP2-205ENST00000480495 MT-ATP8P03928 68 aa6.5□□□□□ -1.37
TDP2-205ENST00000480495 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
TDP2-205ENST00000480495 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
TDP2-205ENST00000480495 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
TDP2-205ENST00000480495 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
TDP2-205ENST00000480495 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
TDP2-205ENST00000480495 R4GN34 69 aa6.4□□□□□ -1.38
TDP2-205ENST00000480495 P0C880 135 aa6.38□□□□□ -1.39
TDP2-205ENST00000480495 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
TDP2-205ENST00000480495 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
TDP2-205ENST00000480495 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
TDP2-205ENST00000480495 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
TDP2-205ENST00000480495 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
TDP2-205ENST00000480495 M0QZ58 72 aa6.33□□□□□ -1.4
TDP2-205ENST00000480495 ACYP2P14621 99 aa6.32□□□□□ -1.4
TDP2-205ENST00000480495 MT1XP80297 61 aa6.31□□□□□ -1.4
TDP2-205ENST00000480495 NEBP20929 6669 aa6.28□□□□□ -1.4
TDP2-205ENST00000480495 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
TDP2-205ENST00000480495 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
TDP2-205ENST00000480495 COX7CP15954 63 aa6.24□□□□□ -1.41
TDP2-205ENST00000480495 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
TDP2-205ENST00000480495 KMT2DO14686 5537 aa6.21□□□□□ -1.41
TDP2-205ENST00000480495 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
TDP2-205ENST00000480495 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
TDP2-205ENST00000480495 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
TDP2-205ENST00000480495 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
TDP2-205ENST00000480495 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
TDP2-205ENST00000480495 SPANXA2-OT1Q8N9U9 137 aa6.15□□□□□ -1.42
TDP2-205ENST00000480495 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
TDP2-205ENST00000480495 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
TDP2-205ENST00000480495 CCDC179H3BU77 68 aa6.09□□□□□ -1.43
TDP2-205ENST00000480495 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
TDP2-205ENST00000480495 SPRR2EP22531 72 aa6.06□□□□□ -1.44
TDP2-205ENST00000480495 SPRR2BP35325 72 aa6.06□□□□□ -1.44
TDP2-205ENST00000480495 SPRR2AP35326 72 aa6.06□□□□□ -1.44
TDP2-205ENST00000480495 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
TDP2-205ENST00000480495 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
TDP2-205ENST00000480495 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
TDP2-205ENST00000480495 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
TDP2-205ENST00000480495 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
TDP2-205ENST00000480495 KRTAP10-12P60413 245 aa6□□□□□ -1.45
TDP2-205ENST00000480495 H3BS24 57 aa5.99□□□□□ -1.45
TDP2-205ENST00000480495 H7BZZ5 65 aa5.99□□□□□ -1.45
TDP2-205ENST00000480495 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
TDP2-205ENST00000480495 TMEM258P61165 79 aa5.97□□□□□ -1.45
TDP2-205ENST00000480495 COA5Q86WW8 74 aa5.95□□□□□ -1.46
TDP2-205ENST00000480495 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
TDP2-205ENST00000480495 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
TDP2-205ENST00000480495 SEC61GP60059 68 aa5.89□□□□□ -1.47
TDP2-205ENST00000480495 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
TDP2-205ENST00000480495 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
TDP2-205ENST00000480495 SPRR2DP22532 72 aa5.86□□□□□ -1.47
TDP2-205ENST00000480495 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
TDP2-205ENST00000480495 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
TDP2-205ENST00000480495 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
TDP2-205ENST00000480495 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
TDP2-205ENST00000480495 A0A0D9SG42 100 aa5.77□□□□□ -1.49
TDP2-205ENST00000480495 A0A1B0GU33 70 aa5.77□□□□□ -1.49
TDP2-205ENST00000480495 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
TDP2-205ENST00000480495 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
TDP2-205ENST00000480495 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
TDP2-205ENST00000480495 PRR15LQ9BU68 103 aa5.72□□□□□ -1.49
TDP2-205ENST00000480495 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
TDP2-205ENST00000480495 V9GYY9 64 aa5.7□□□□□ -1.5
TDP2-205ENST00000480495 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
TDP2-205ENST00000480495 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.5
TDP2-205ENST00000480495 A0A1B0GU69 56 aa5.65□□□□□ -1.5
TDP2-205ENST00000480495 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
TDP2-205ENST00000480495 MT1EP04732 61 aa5.6□□□□□ -1.51
TDP2-205ENST00000480495 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
TDP2-205ENST00000480495 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
TDP2-205ENST00000480495 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
TDP2-205ENST00000480495 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
TDP2-205ENST00000480495 KRTAP19-3Q7Z4W3 81 aa5.56□□□□□ -1.52
TDP2-205ENST00000480495 A8MU10 97 aa5.52□□□□□ -1.53
TDP2-205ENST00000480495 Q1T7F1 81 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms