RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 UQCR11O14957 56 aa7.93□□□□□ -1.14
DENND4B-208ENST00000480340 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
DENND4B-208ENST00000480340 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
DENND4B-208ENST00000480340 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.15
DENND4B-208ENST00000480340 CSAG1Q6PB30 78 aa7.89□□□□□ -1.15
DENND4B-208ENST00000480340 IGKV2-30P06310 120 aa7.85□□□□□ -1.15
DENND4B-208ENST00000480340 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
DENND4B-208ENST00000480340 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
DENND4B-208ENST00000480340 J3QL48 77 aa7.77□□□□□ -1.17
DENND4B-208ENST00000480340 IGKV2D-30A0A075B6S6 120 aa7.76□□□□□ -1.17
DENND4B-208ENST00000480340 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
DENND4B-208ENST00000480340 KRTAP25-1Q3LHN0 102 aa7.62□□□□□ -1.19
DENND4B-208ENST00000480340 A8MUU9 505 aa7.61□□□□□ -1.19
DENND4B-208ENST00000480340 ROMO1P60602 79 aa7.59□□□□□ -1.19
DENND4B-208ENST00000480340 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
DENND4B-208ENST00000480340 H0YAA0 97 aa7.57□□□□□ -1.2
DENND4B-208ENST00000480340 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
DENND4B-208ENST00000480340 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.21
DENND4B-208ENST00000480340 XP32Q5T750 250 aa7.51□□□□□ -1.21
DENND4B-208ENST00000480340 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
DENND4B-208ENST00000480340 LPAP08519 4548 aa7.48□□□□□ -1.21
DENND4B-208ENST00000480340 A0A1B0GU33 70 aa7.45□□□□□ -1.22
DENND4B-208ENST00000480340 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
DENND4B-208ENST00000480340 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
DENND4B-208ENST00000480340 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
DENND4B-208ENST00000480340 LRP2P98164 4655 aa7.4□□□□□ -1.22
DENND4B-208ENST00000480340 P0C880 135 aa7.38□□□□□ -1.23
DENND4B-208ENST00000480340 CRIPTQ9P021 101 aa7.37□□□□□ -1.23
DENND4B-208ENST00000480340 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
DENND4B-208ENST00000480340 K7ERS5 55 aa7.34□□□□□ -1.23
DENND4B-208ENST00000480340 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
DENND4B-208ENST00000480340 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
DENND4B-208ENST00000480340 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
DENND4B-208ENST00000480340 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
DENND4B-208ENST00000480340 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
DENND4B-208ENST00000480340 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
DENND4B-208ENST00000480340 MUC2Q02817 5179 aa7.12□□□□□ -1.27
DENND4B-208ENST00000480340 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
DENND4B-208ENST00000480340 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
DENND4B-208ENST00000480340 A0A0D9SG42 100 aa7.07□□□□□ -1.28
DENND4B-208ENST00000480340 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
DENND4B-208ENST00000480340 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
DENND4B-208ENST00000480340 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
DENND4B-208ENST00000480340 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
DENND4B-208ENST00000480340 KRTAP19-2Q3LHN2 52 aa6.9□□□□□ -1.3
DENND4B-208ENST00000480340 S4R3F8 94 aa6.9□□□□□ -1.3
DENND4B-208ENST00000480340 KRTAP12-2P59991 146 aa6.9□□□□□ -1.31
DENND4B-208ENST00000480340 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
DENND4B-208ENST00000480340 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
DENND4B-208ENST00000480340 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
DENND4B-208ENST00000480340 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
DENND4B-208ENST00000480340 MT1HP80294 61 aa6.67□□□□□ -1.34
DENND4B-208ENST00000480340 M0R2T5 61 aa6.64□□□□□ -1.35
DENND4B-208ENST00000480340 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
DENND4B-208ENST00000480340 M0QZ58 72 aa6.6□□□□□ -1.35
DENND4B-208ENST00000480340 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
DENND4B-208ENST00000480340 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
DENND4B-208ENST00000480340 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
DENND4B-208ENST00000480340 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
DENND4B-208ENST00000480340 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
DENND4B-208ENST00000480340 R4GN34 69 aa6.41□□□□□ -1.38
DENND4B-208ENST00000480340 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
DENND4B-208ENST00000480340 MT2AP02795 61 aa6.38□□□□□ -1.39
DENND4B-208ENST00000480340 MT1FP04733 61 aa6.36□□□□□ -1.39
DENND4B-208ENST00000480340 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
DENND4B-208ENST00000480340 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
DENND4B-208ENST00000480340 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
DENND4B-208ENST00000480340 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
DENND4B-208ENST00000480340 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
DENND4B-208ENST00000480340 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
DENND4B-208ENST00000480340 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
DENND4B-208ENST00000480340 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
DENND4B-208ENST00000480340 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
DENND4B-208ENST00000480340 LCE2BO14633 110 aa6.04□□□□□ -1.44
DENND4B-208ENST00000480340 USH2AO75445 5202 aa6.04□□□□□ -1.44
DENND4B-208ENST00000480340 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
DENND4B-208ENST00000480340 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
DENND4B-208ENST00000480340 MT1BP07438 61 aa5.98□□□□□ -1.45
DENND4B-208ENST00000480340 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
DENND4B-208ENST00000480340 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
DENND4B-208ENST00000480340 TNP1P09430 55 aa5.91□□□□□ -1.46
DENND4B-208ENST00000480340 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
DENND4B-208ENST00000480340 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
DENND4B-208ENST00000480340 MT1XP80297 61 aa5.77□□□□□ -1.49
DENND4B-208ENST00000480340 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
DENND4B-208ENST00000480340 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
DENND4B-208ENST00000480340 MACF1Q9UPN3 7388 aaKnown RBP5.69□□□□□ -1.5
DENND4B-208ENST00000480340 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
DENND4B-208ENST00000480340 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
DENND4B-208ENST00000480340 INE1O15225 51 aa5.67□□□□□ -1.5
DENND4B-208ENST00000480340 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
DENND4B-208ENST00000480340 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
DENND4B-208ENST00000480340 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
DENND4B-208ENST00000480340 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
DENND4B-208ENST00000480340 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
DENND4B-208ENST00000480340 KMT2DO14686 5537 aa5.39□□□□□ -1.55
DENND4B-208ENST00000480340 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
DENND4B-208ENST00000480340 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
DENND4B-208ENST00000480340 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
DENND4B-208ENST00000480340 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms