RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 COX6B2Q6YFQ2 88 aa8.98□□□□□ -0.97
PKD1-213ENST00000480227 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
PKD1-213ENST00000480227 PRAC1Q96KF2 57 aa8.95□□□□□ -0.98
PKD1-213ENST00000480227 H0YAA0 97 aa8.92□□□□□ -0.98
PKD1-213ENST00000480227 RPL37P61927 97 aaKnown RBP8.91□□□□□ -0.98
PKD1-213ENST00000480227 XP32Q5T750 250 aa8.91□□□□□ -0.98
PKD1-213ENST00000480227 A0A1B0GU33 70 aa8.9□□□□□ -0.99
PKD1-213ENST00000480227 MT1HL1P0DM35 61 aa8.87□□□□□ -0.99
PKD1-213ENST00000480227 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
PKD1-213ENST00000480227 LPAP08519 4548 aa8.84□□□□□ -0.99
PKD1-213ENST00000480227 LRP2P98164 4655 aa8.79□□□□□ -1
PKD1-213ENST00000480227 BIRC6Q9NR09 4857 aa8.77□□□□□ -1
PKD1-213ENST00000480227 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
PKD1-213ENST00000480227 ABCA13Q86UQ4 5058 aa8.75□□□□□ -1.01
PKD1-213ENST00000480227 KRTAP4-5Q9BYR2 181 aa8.69□□□□□ -1.02
PKD1-213ENST00000480227 S4R3F8 94 aa8.69□□□□□ -1.02
PKD1-213ENST00000480227 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
PKD1-213ENST00000480227 KRTAP10-6P60371 365 aaPredicted RBP8.65□□□□□ -1.02
PKD1-213ENST00000480227 HERC2O95714 4834 aa8.64□□□□□ -1.03
PKD1-213ENST00000480227 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
PKD1-213ENST00000480227 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
PKD1-213ENST00000480227 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
PKD1-213ENST00000480227 K7ERS5 55 aa8.57□□□□□ -1.04
PKD1-213ENST00000480227 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
PKD1-213ENST00000480227 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
PKD1-213ENST00000480227 A0A0D9SG42 100 aa8.55□□□□□ -1.04
PKD1-213ENST00000480227 P0C880 135 aa8.53□□□□□ -1.04
PKD1-213ENST00000480227 H3BS24 57 aa8.5□□□□□ -1.05
PKD1-213ENST00000480227 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
PKD1-213ENST00000480227 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
PKD1-213ENST00000480227 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
PKD1-213ENST00000480227 ROMO1P60602 79 aa8.36□□□□□ -1.07
PKD1-213ENST00000480227 HERC1Q15751 4861 aa8.33□□□□□ -1.08
PKD1-213ENST00000480227 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
PKD1-213ENST00000480227 J3QL48 77 aa8.28□□□□□ -1.08
PKD1-213ENST00000480227 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
PKD1-213ENST00000480227 SPINT4Q6UDR6 99 aa8.26□□□□□ -1.09
PKD1-213ENST00000480227 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
PKD1-213ENST00000480227 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
PKD1-213ENST00000480227 M0QZ58 72 aa8.2□□□□□ -1.1
PKD1-213ENST00000480227 MUC2Q02817 5179 aa8.2□□□□□ -1.1
PKD1-213ENST00000480227 C10orf95Q9H7T3 257 aa8.13□□□□□ -1.11
PKD1-213ENST00000480227 R4GN34 69 aa8.08□□□□□ -1.12
PKD1-213ENST00000480227 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
PKD1-213ENST00000480227 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
PKD1-213ENST00000480227 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
PKD1-213ENST00000480227 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
PKD1-213ENST00000480227 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
PKD1-213ENST00000480227 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
PKD1-213ENST00000480227 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
PKD1-213ENST00000480227 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
PKD1-213ENST00000480227 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
PKD1-213ENST00000480227 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
PKD1-213ENST00000480227 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
PKD1-213ENST00000480227 M0R2T5 61 aa7.46□□□□□ -1.22
PKD1-213ENST00000480227 MT1HP80294 61 aa7.43□□□□□ -1.22
PKD1-213ENST00000480227 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
PKD1-213ENST00000480227 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
PKD1-213ENST00000480227 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
PKD1-213ENST00000480227 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
PKD1-213ENST00000480227 TNP1P09430 55 aa7.33□□□□□ -1.24
PKD1-213ENST00000480227 MT1FP04733 61 aa7.29□□□□□ -1.24
PKD1-213ENST00000480227 MT2AP02795 61 aa7.27□□□□□ -1.24
PKD1-213ENST00000480227 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
PKD1-213ENST00000480227 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
PKD1-213ENST00000480227 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
PKD1-213ENST00000480227 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
PKD1-213ENST00000480227 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
PKD1-213ENST00000480227 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
PKD1-213ENST00000480227 MT1BP07438 61 aa7□□□□□ -1.29
PKD1-213ENST00000480227 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
PKD1-213ENST00000480227 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
PKD1-213ENST00000480227 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
PKD1-213ENST00000480227 MT1XP80297 61 aa6.92□□□□□ -1.3
PKD1-213ENST00000480227 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
PKD1-213ENST00000480227 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
PKD1-213ENST00000480227 USH2AO75445 5202 aa6.79□□□□□ -1.32
PKD1-213ENST00000480227 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
PKD1-213ENST00000480227 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
PKD1-213ENST00000480227 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
PKD1-213ENST00000480227 LCE2BO14633 110 aa6.71□□□□□ -1.34
PKD1-213ENST00000480227 KRTAP12-3P60328 96 aa6.65□□□□□ -1.35
PKD1-213ENST00000480227 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
PKD1-213ENST00000480227 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
PKD1-213ENST00000480227 KMT2DO14686 5537 aa6.62□□□□□ -1.35
PKD1-213ENST00000480227 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
PKD1-213ENST00000480227 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
PKD1-213ENST00000480227 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
PKD1-213ENST00000480227 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
PKD1-213ENST00000480227 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
PKD1-213ENST00000480227 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
PKD1-213ENST00000480227 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
PKD1-213ENST00000480227 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
PKD1-213ENST00000480227 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
PKD1-213ENST00000480227 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
PKD1-213ENST00000480227 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
PKD1-213ENST00000480227 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
PKD1-213ENST00000480227 MT1EP04732 61 aa5.99□□□□□ -1.45
PKD1-213ENST00000480227 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
PKD1-213ENST00000480227 MT1LQ93083 61 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms