RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 Q8N1X5 172 aa6.03□□□□□ -1.44
CHD6-208ENST00000480022 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
CHD6-208ENST00000480022 VPS13BQ7Z7G8 4022 aa6.03□□□□□ -1.44
CHD6-208ENST00000480022 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
CHD6-208ENST00000480022 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
CHD6-208ENST00000480022 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
CHD6-208ENST00000480022 Q5VSD8 79 aa6.01□□□□□ -1.45
CHD6-208ENST00000480022 HERC2O95714 4834 aa6□□□□□ -1.45
CHD6-208ENST00000480022 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
CHD6-208ENST00000480022 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
CHD6-208ENST00000480022 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
CHD6-208ENST00000480022 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
CHD6-208ENST00000480022 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
CHD6-208ENST00000480022 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
CHD6-208ENST00000480022 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
CHD6-208ENST00000480022 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
CHD6-208ENST00000480022 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
CHD6-208ENST00000480022 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.48
CHD6-208ENST00000480022 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
CHD6-208ENST00000480022 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
CHD6-208ENST00000480022 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
CHD6-208ENST00000480022 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CHD6-208ENST00000480022 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
CHD6-208ENST00000480022 PCLOQ9Y6V0 5065 aa5.78□□□□□ -1.48
CHD6-208ENST00000480022 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
CHD6-208ENST00000480022 TNXBP22105 4242 aa5.75□□□□□ -1.49
CHD6-208ENST00000480022 MT1HL1P0DM35 61 aa5.75□□□□□ -1.49
CHD6-208ENST00000480022 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
CHD6-208ENST00000480022 A0A0D9SG42 100 aa5.7□□□□□ -1.5
CHD6-208ENST00000480022 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
CHD6-208ENST00000480022 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
CHD6-208ENST00000480022 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
CHD6-208ENST00000480022 DMBT1Q9UGM3 2413 aaPredicted RBP5.6□□□□□ -1.51
CHD6-208ENST00000480022 S4R3F8 94 aa5.6□□□□□ -1.51
CHD6-208ENST00000480022 HERC1Q15751 4861 aa5.6□□□□□ -1.51
CHD6-208ENST00000480022 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
CHD6-208ENST00000480022 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
CHD6-208ENST00000480022 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
CHD6-208ENST00000480022 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CHD6-208ENST00000480022 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
CHD6-208ENST00000480022 XP32Q5T750 250 aa5.52□□□□□ -1.53
CHD6-208ENST00000480022 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
CHD6-208ENST00000480022 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
CHD6-208ENST00000480022 LPAP08519 4548 aa5.43□□□□□ -1.54
CHD6-208ENST00000480022 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CHD6-208ENST00000480022 LRP2P98164 4655 aa5.37□□□□□ -1.55
CHD6-208ENST00000480022 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
CHD6-208ENST00000480022 M0QZ58 72 aa5.3□□□□□ -1.56
CHD6-208ENST00000480022 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
CHD6-208ENST00000480022 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
CHD6-208ENST00000480022 R4GN34 69 aa5.22□□□□□ -1.57
CHD6-208ENST00000480022 MUC2Q02817 5179 aa5.15□□□□□ -1.59
CHD6-208ENST00000480022 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
CHD6-208ENST00000480022 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
CHD6-208ENST00000480022 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
CHD6-208ENST00000480022 INE1O15225 51 aa4.98□□□□□ -1.61
CHD6-208ENST00000480022 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
CHD6-208ENST00000480022 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
CHD6-208ENST00000480022 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
CHD6-208ENST00000480022 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
CHD6-208ENST00000480022 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
CHD6-208ENST00000480022 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
CHD6-208ENST00000480022 MT1HP80294 61 aa4.86□□□□□ -1.63
CHD6-208ENST00000480022 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
CHD6-208ENST00000480022 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
CHD6-208ENST00000480022 M0R2T5 61 aa4.78□□□□□ -1.65
CHD6-208ENST00000480022 TNP1P09430 55 aa4.76□□□□□ -1.65
CHD6-208ENST00000480022 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
CHD6-208ENST00000480022 MT2AP02795 61 aa4.6□□□□□ -1.67
CHD6-208ENST00000480022 MT1FP04733 61 aa4.58□□□□□ -1.68
CHD6-208ENST00000480022 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
CHD6-208ENST00000480022 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
CHD6-208ENST00000480022 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
CHD6-208ENST00000480022 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
CHD6-208ENST00000480022 LCE2BO14633 110 aa4.4□□□□□ -1.7
CHD6-208ENST00000480022 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.7
CHD6-208ENST00000480022 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
CHD6-208ENST00000480022 USH2AO75445 5202 aa4.34□□□□□ -1.71
CHD6-208ENST00000480022 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
CHD6-208ENST00000480022 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
CHD6-208ENST00000480022 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
CHD6-208ENST00000480022 MT1BP07438 61 aa4.28□□□□□ -1.72
CHD6-208ENST00000480022 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
CHD6-208ENST00000480022 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
CHD6-208ENST00000480022 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
CHD6-208ENST00000480022 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
CHD6-208ENST00000480022 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
CHD6-208ENST00000480022 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
CHD6-208ENST00000480022 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
CHD6-208ENST00000480022 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
CHD6-208ENST00000480022 MT1XP80297 61 aa4.09□□□□□ -1.75
CHD6-208ENST00000480022 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
CHD6-208ENST00000480022 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
CHD6-208ENST00000480022 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
CHD6-208ENST00000480022 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms